| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is bfr [H]
Identifier: 209551459
GI number: 209551459
Start: 4029025
End: 4029510
Strand: Reverse
Name: bfr [H]
Synonym: Rleg2_3888
Alternate gene names: 209551459
Gene position: 4029510-4029025 (Counterclockwise)
Preceding gene: 209551460
Following gene: 209551452
Centisome position: 88.8
GC content: 54.73
Gene sequence:
>486_bases TTGAAAGGCGACAAAAAAGTCATCGAGCGGCTTAACGAGGCGTTGTTCCTCGAGCTCGGGGCAGTCAATCAATATTGGGT TCATTATCGTCTTCTTGAGGACTGGGGTTACACCAAGCTCGCCAAGAAGGAGCGCGCCGAATCGATCGAAGAGATGCATC ATGCCGACCGGCTTGTTGCGCGCATCATTTTCCTTGAAGGCCATCCCAATCTGCAGACCCTTGCACCTCTGCGCATCGGC CAGAACGTCAAGGAAGTGCTGGAAGCCGATCTCGCCGGCGAATACGACGCCCGCGCAGCGTACAAGAAGTCGCGCGATAT CTGTCACGAAGCCGGCGATTACGTTTCCATGAAGCTCTTCGAAGAGCTGCTGATGGACGAGGAAGGCCATATCGACTTCC TCGAAACGCAGCTCGATCTGCTCGGAAAAATCGGCGAGAGCAAATATGGCCAGCTCAACGCCGATTCCGCCAACGAGGCA GAATAA
Upstream 100 bases:
>100_bases ACCGAGGAATATCACGCCCGTCGCCACTCGACGGAGACCGAAATATTTGATTTCATGTCCCGCTTGAAACAATTCCATGA GGAAAACAGGAGAGCGGACA
Downstream 100 bases:
>100_bases GCTCTCACGAGATGCCGGCCGCCTTTGGGCGGCCGGAACTCCTCCCGCTTGCCGAGCGCAAACGGAGGCGTCACTCCGGC ATGATCAGTCTTCCGATTGC
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKGDKKVIERLNEALFLELGAVNQYWVHYRLLEDWGYTKLAKKERAESIEEMHHADRLVARIIFLEGHPNLQTLAPLRIG QNVKEVLEADLAGEYDARAAYKKSRDICHEAGDYVSMKLFEELLMDEEGHIDFLETQLDLLGKIGESKYGQLNADSANEA E
Sequences:
>Translated_161_residues MKGDKKVIERLNEALFLELGAVNQYWVHYRLLEDWGYTKLAKKERAESIEEMHHADRLVARIIFLEGHPNLQTLAPLRIG QNVKEVLEADLAGEYDARAAYKKSRDICHEAGDYVSMKLFEELLMDEEGHIDFLETQLDLLGKIGESKYGQLNADSANEA E >Mature_161_residues MKGDKKVIERLNEALFLELGAVNQYWVHYRLLEDWGYTKLAKKERAESIEEMHHADRLVARIIFLEGHPNLQTLAPLRIG QNVKEVLEADLAGEYDARAAYKKSRDICHEAGDYVSMKLFEELLMDEEGHIDFLETQLDLLGKIGESKYGQLNADSANEA E
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=151, Percent_Identity=50.3311258278146, Blast_Score=142, Evalue=8e-36,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18449; Mature: 18449
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDKKVIERLNEALFLELGAVNQYWVHYRLLEDWGYTKLAKKERAESIEEMHHADRLVA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RIIFLEGHPNLQTLAPLRIGQNVKEVLEADLAGEYDARAAYKKSRDICHEAGDYVSMKLF HHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH EELLMDEEGHIDFLETQLDLLGKIGESKYGQLNADSANEAE HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKGDKKVIERLNEALFLELGAVNQYWVHYRLLEDWGYTKLAKKERAESIEEMHHADRLVA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RIIFLEGHPNLQTLAPLRIGQNVKEVLEADLAGEYDARAAYKKSRDICHEAGDYVSMKLF HHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH EELLMDEEGHIDFLETQLDLLGKIGESKYGQLNADSANEAE HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7698330; 11756688 [H]