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The map label for this gene is ftsY [H]

Identifier: 209551317

GI number: 209551317

Start: 3871485

End: 3873071

Strand: Reverse

Name: ftsY [H]

Synonym: Rleg2_3746

Alternate gene names: 209551317

Gene position: 3873071-3871485 (Counterclockwise)

Preceding gene: 209551318

Following gene: 209551316

Centisome position: 85.35

GC content: 62.82

Gene sequence:

>1587_bases
ATGGCGCTCAGTTTCATCAAAAAGGTCTTCACCTTCGGCAAGGACAAGCCGGCGGAAGAGCCCGTGCCTGAAGCCGTGGC
AAGGGAGCTCGAGCCGCGCTCGCGTGCCGAAGATCTGCCGGTCGCCGCTGATCCGGTGCTTCCCGAGGAGATGGATACGG
CCGGCGGGCCAGCGGCGGATGTCGGTGAAGGTGAGATAGAGGAGCCAGGCATCCTCGATGAGGTCTTGCCTTTGCCTCCC
GCAGATCAAATGAGCGATTTCGGGCTGGTGCCACTTTCATTGCTGGAGATCGAGGCCGAAGCAGAGACGCAGGCGAGTGA
CGAGAGCGAGGCGGAAGCACCCCCCTCTGTCCCTTCGGGACATCTCCCCCACAAGGGGGGAGATCGTTCGGAGGCTGACG
CGCCGGCTTCGGTCGAGGAGACCGCGGAAGTCGCAGAAGCGCTCTCAGAGGAAATTCCTGCTGAGATCGATGTAGAAGAA
GACATTTCCATCCAGCCGATCTCCCCCCTTGTGGGGGAGATGCCCGGCAGGGCAGAGGGGGGTATCACACCCACCGAGCC
TTCCGATCTGACTGCGGAACAGCCGAAGCCGGAATTTCCTGTCCTCCCTAAAGGCTTCGCCACCGGCCCGGCAATCGTCG
AACAGCAACCTATTGTCCCGCAGCCAAAACTCAGCTGGTTCCAGCGCCTGCGCAACGGCCTTGCGCGCACCTCTTCGCAG
CTGACCGGCCAGATCACCGCGCTGTTCACCAAGCGCAAGCTTGATGACGAGACGCTGCAGGATCTCGAAGACCTGCTGAT
CCAGGCCGATCTCGGCGTCGAGACCGCACTGCGCGTTACCGATACGCTGGCGTCCGAGCGTTATGGCAAGGATGTGACCG
GCGAGGATGTCAGCCGGATCATGGCGTCTGAAATCGCCAAAGTTCTGAAGCCGGTCGCCAAGCCGCTGCAGCTCGACCTC
TCGCACAAGCCGCATGTCATTCTCGTCGTCGGCGTCAACGGCACCGGCAAAACGACGACGATCGGCAAGCTTGCAGCAAA
ACTTTCGGGCGCCGGGCTGAAGGTGATGCTGGCCGCCGGCGATACCTTCCGTGCCGCGGCGATCGAGCAGCTGAAGATCT
GGGCCGAGCGAACGAATTCCGAATTCATCGGCACCAAGCTTGGTGCCGATGCCGCCGGCCTTGCCTATGACGCCTTCGAA
CAGGCGAAAGCCCGGAAATGCGACGTGCTGATCGTCGATACCGCCGGCCGGCTGCAGAACAAGGCCGAGCTGATGGCCGA
GCTCGAGAAGATCGTGCGCGTGCTCGGCAAGCTCGATCCCGATGCGCCGCACACGGTGCTGCAGACGCTCGATGCGACGA
CGGGGCAGAATGCGCTGAGCCAGGTCGAGATCTTCCGCAACGTCGCCGGCGTCAACGGCCTCATCATGACCAAGCTCGAC
GGCACGGCACGCGGCGGCATCCTCGTCGCCATTTCCGCCAAGCACAAGCTGCCGGTCTATTTCATCGGGGTCGGCGAGGG
TGTCGAGGATCTGGAGCCGTTCGAGGCCGAGGATTTCGCGCACGCCATTGCCGGACTTCCCCAATGA

Upstream 100 bases:

>100_bases
CCCGGTGAACTTGTGCCGGCCACGATCACCGGCCACAATGGCAAACATCTTGACATGCAATTGACGGCCGCAGCCGCGGC
CTGACTTTCACGGAATCCCC

Downstream 100 bases:

>100_bases
TGCCACAGATATGCCGCCGAAAGCCTGCAAGGCACGGGCGACCAGGTTTTCAGGAATAGCAGGTTTGAAGAACGCATGAC
CACCGAAAGCGATATCACCC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MALSFIKKVFTFGKDKPAEEPVPEAVARELEPRSRAEDLPVAADPVLPEEMDTAGGPAADVGEGEIEEPGILDEVLPLPP
ADQMSDFGLVPLSLLEIEAEAETQASDESEAEAPPSVPSGHLPHKGGDRSEADAPASVEETAEVAEALSEEIPAEIDVEE
DISIQPISPLVGEMPGRAEGGITPTEPSDLTAEQPKPEFPVLPKGFATGPAIVEQQPIVPQPKLSWFQRLRNGLARTSSQ
LTGQITALFTKRKLDDETLQDLEDLLIQADLGVETALRVTDTLASERYGKDVTGEDVSRIMASEIAKVLKPVAKPLQLDL
SHKPHVILVVGVNGTGKTTTIGKLAAKLSGAGLKVMLAAGDTFRAAAIEQLKIWAERTNSEFIGTKLGADAAGLAYDAFE
QAKARKCDVLIVDTAGRLQNKAELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNALSQVEIFRNVAGVNGLIMTKLD
GTARGGILVAISAKHKLPVYFIGVGEGVEDLEPFEAEDFAHAIAGLPQ

Sequences:

>Translated_528_residues
MALSFIKKVFTFGKDKPAEEPVPEAVARELEPRSRAEDLPVAADPVLPEEMDTAGGPAADVGEGEIEEPGILDEVLPLPP
ADQMSDFGLVPLSLLEIEAEAETQASDESEAEAPPSVPSGHLPHKGGDRSEADAPASVEETAEVAEALSEEIPAEIDVEE
DISIQPISPLVGEMPGRAEGGITPTEPSDLTAEQPKPEFPVLPKGFATGPAIVEQQPIVPQPKLSWFQRLRNGLARTSSQ
LTGQITALFTKRKLDDETLQDLEDLLIQADLGVETALRVTDTLASERYGKDVTGEDVSRIMASEIAKVLKPVAKPLQLDL
SHKPHVILVVGVNGTGKTTTIGKLAAKLSGAGLKVMLAAGDTFRAAAIEQLKIWAERTNSEFIGTKLGADAAGLAYDAFE
QAKARKCDVLIVDTAGRLQNKAELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNALSQVEIFRNVAGVNGLIMTKLD
GTARGGILVAISAKHKLPVYFIGVGEGVEDLEPFEAEDFAHAIAGLPQ
>Mature_527_residues
ALSFIKKVFTFGKDKPAEEPVPEAVARELEPRSRAEDLPVAADPVLPEEMDTAGGPAADVGEGEIEEPGILDEVLPLPPA
DQMSDFGLVPLSLLEIEAEAETQASDESEAEAPPSVPSGHLPHKGGDRSEADAPASVEETAEVAEALSEEIPAEIDVEED
ISIQPISPLVGEMPGRAEGGITPTEPSDLTAEQPKPEFPVLPKGFATGPAIVEQQPIVPQPKLSWFQRLRNGLARTSSQL
TGQITALFTKRKLDDETLQDLEDLLIQADLGVETALRVTDTLASERYGKDVTGEDVSRIMASEIAKVLKPVAKPLQLDLS
HKPHVILVVGVNGTGKTTTIGKLAAKLSGAGLKVMLAAGDTFRAAAIEQLKIWAERTNSEFIGTKLGADAAGLAYDAFEQ
AKARKCDVLIVDTAGRLQNKAELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNALSQVEIFRNVAGVNGLIMTKLDG
TARGGILVAISAKHKLPVYFIGVGEGVEDLEPFEAEDFAHAIAGLPQ

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=204, Percent_Identity=36.2745098039216, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI4507215, Length=204, Percent_Identity=36.2745098039216, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI295424842, Length=322, Percent_Identity=26.7080745341615, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI23308697, Length=322, Percent_Identity=26.7080745341615, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI89061728, Length=133, Percent_Identity=33.0827067669173, Blast_Score=81, Evalue=3e-15,
Organism=Escherichia coli, GI1789874, Length=304, Percent_Identity=48.3552631578947, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1788963, Length=307, Percent_Identity=31.5960912052117, Blast_Score=135, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=276, Percent_Identity=29.7101449275362, Blast_Score=122, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=323, Percent_Identity=28.7925696594427, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=205, Percent_Identity=38.0487804878049, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=223, Percent_Identity=28.2511210762332, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17647949, Length=276, Percent_Identity=30.4347826086957, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24641198, Length=290, Percent_Identity=28.9655172413793, Blast_Score=114, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 56015; Mature: 55884

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSFIKKVFTFGKDKPAEEPVPEAVARELEPRSRAEDLPVAADPVLPEEMDTAGGPAAD
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCC
VGEGEIEEPGILDEVLPLPPADQMSDFGLVPLSLLEIEAEAETQASDESEAEAPPSVPSG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHEEEEHHHHHCCCCCCCCCCCCCCCCC
HLPHKGGDRSEADAPASVEETAEVAEALSEEIPAEIDVEEDISIQPISPLVGEMPGRAEG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GITPTEPSDLTAEQPKPEFPVLPKGFATGPAIVEQQPIVPQPKLSWFQRLRNGLARTSSQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LTGQITALFTKRKLDDETLQDLEDLLIQADLGVETALRVTDTLASERYGKDVTGEDVSRI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MASEIAKVLKPVAKPLQLDLSHKPHVILVVGVNGTGKTTTIGKLAAKLSGAGLKVMLAAG
HHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECC
DTFRAAAIEQLKIWAERTNSEFIGTKLGADAAGLAYDAFEQAKARKCDVLIVDTAGRLQN
CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHH
KAELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNALSQVEIFRNVAGVNGLIMTKLD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECC
GTARGGILVAISAKHKLPVYFIGVGEGVEDLEPFEAEDFAHAIAGLPQ
CCCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ALSFIKKVFTFGKDKPAEEPVPEAVARELEPRSRAEDLPVAADPVLPEEMDTAGGPAAD
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCC
VGEGEIEEPGILDEVLPLPPADQMSDFGLVPLSLLEIEAEAETQASDESEAEAPPSVPSG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHEEEEHHHHHCCCCCCCCCCCCCCCCC
HLPHKGGDRSEADAPASVEETAEVAEALSEEIPAEIDVEEDISIQPISPLVGEMPGRAEG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
GITPTEPSDLTAEQPKPEFPVLPKGFATGPAIVEQQPIVPQPKLSWFQRLRNGLARTSSQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LTGQITALFTKRKLDDETLQDLEDLLIQADLGVETALRVTDTLASERYGKDVTGEDVSRI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MASEIAKVLKPVAKPLQLDLSHKPHVILVVGVNGTGKTTTIGKLAAKLSGAGLKVMLAAG
HHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECC
DTFRAAAIEQLKIWAERTNSEFIGTKLGADAAGLAYDAFEQAKARKCDVLIVDTAGRLQN
CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHH
KAELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNALSQVEIFRNVAGVNGLIMTKLD
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECC
GTARGGILVAISAKHKLPVYFIGVGEGVEDLEPFEAEDFAHAIAGLPQ
CCCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]