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The map label for this gene is sdhD [H]

Identifier: 209551263

GI number: 209551263

Start: 3821782

End: 3822162

Strand: Reverse

Name: sdhD [H]

Synonym: Rleg2_3691

Alternate gene names: 209551263

Gene position: 3822162-3821782 (Counterclockwise)

Preceding gene: 209551264

Following gene: 209551262

Centisome position: 84.23

GC content: 57.22

Gene sequence:

>381_bases
ATGGATATGCGCACCCCCCTCGGCAAGGTTCGCGGGCTCGGCTCCGCCAAGGACGGCACGGACCATTTCTGGCGCCAGCG
TCTGACGGCCGTCGCCAATGTTCCGCTCATCCTTTTCTTTCTCTTCTTCATGATCACCTATGCCGGCGCACCCTATGCGG
ATGTGGTCCGCGCCCTGTCGAACCCGTTCGTTGCCGTGGTCATGGGGCTGATGGTGATTTCAGGCGTCATCCACATGAAG
CTCGGCATGCAGGTGATCATCGAGGATTACGTGCACGGCGAATTCGGCAAGATCGCTCTCTTAATGCTGAACACCTTCTT
TGCGATCCTGATCGCCGGCCTCTGTCTCTTCGCCATTCTGAAAATCGCATTCGTAGGATAA

Upstream 100 bases:

>100_bases
TTCTCGACCAAGCTCGCCATCGCCAACATCATCGGGTCGCTCTGTCTGACCGTGCTGGTCTGGGTGATCGGCTTCCTCAT
TCGCTTCTGAAGGTCCTCTC

Downstream 100 bases:

>100_bases
GCTCGATATGGCACCGACTTCACCCGCCCAGAACGGCAAGGCCTACAAATATGTCGATCACTCCTACGACGTGATCGTCG
TCGGCGCCGGCGGCGCCGGC

Product: succinate dehydrogenase, hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MDMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALSNPFVAVVMGLMVISGVIHMK
LGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAILKIAFVG

Sequences:

>Translated_126_residues
MDMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALSNPFVAVVMGLMVISGVIHMK
LGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAILKIAFVG
>Mature_126_residues
MDMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALSNPFVAVVMGLMVISGVIHMK
LGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAILKIAFVG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 13839; Mature: 13839

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALS
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
NPFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIAFVG
HHHHCC
>Mature Secondary Structure
MDMRTPLGKVRGLGSAKDGTDHFWRQRLTAVANVPLILFFLFFMITYAGAPYADVVRALS
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
NPFVAVVMGLMVISGVIHMKLGMQVIIEDYVHGEFGKIALLMLNTFFAILIAGLCLFAIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIAFVG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA