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The map label for this gene is omp19 [H]

Identifier: 209551259

GI number: 209551259

Start: 3817957

End: 3818469

Strand: Reverse

Name: omp19 [H]

Synonym: Rleg2_3687

Alternate gene names: 209551259

Gene position: 3818469-3817957 (Counterclockwise)

Preceding gene: 209551260

Following gene: 209551258

Centisome position: 84.15

GC content: 65.5

Gene sequence:

>513_bases
ATGCAGTTGCGATATGCGATGACAGGTCTGGTGGTGGCTCTCGCTCTAGCCGGTTGTCAGCGTACGGCATATGATTACAA
CTCCAGCCCGAATGCCGGGCCGGCGCCGTTGACGGCGCAGCCGGTTCCCTCGGTTCAGGGTGGGCAGCTTCCGCCGGTCA
ACAACTCGCAGTTCCCCGCGGCGCCGGCATCGACGGCACCGATGCCGGGCGCGCAGTCCGGCGCCATGGCTGCGAATGCG
CTCGATGTCACCAAGGAATCGATGGTCGGAAGCTGGCGTGTCAATGGCAGCTGCGACATGTTCCTGACGCTCACCAATCT
CGGCAGCGGTTCGCGCGGCGGCACACGTGGCTGCGTCGGCGAGCTGACGGCGATGGGCTCCTGGGAGGTTGCCGGCAAGC
AGGTGCTGCTCAAGGACCGCTCGGGCAATCAGCTCGGCAGCGTTTACAAGACGGCCGACAACCGCTTCGAGGGCCAGACC
AGCACGGGCCAGCAGATCAGCCTCAGCCGGTAA

Upstream 100 bases:

>100_bases
ATTTATGCCGTCCGACTTGATTAACCAAAGCGAGTTACGATAATCGGACTTGTCTCACGCCCGTTTCTCTGCGGCGCTAG
CCGAAATCAGGAGTATGATG

Downstream 100 bases:

>100_bases
CAAGTACCGGCGCGGTAAAAGTGCCGGCGCGGTAACGATCCGGCGGGCCCCGCCGATGACTGACAGGCGGATATGCCCTC
ATGCAGCCAATGCCAGATTA

Product: outer membrane lipoprotein omp19

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQLRYAMTGLVVALALAGCQRTAYDYNSSPNAGPAPLTAQPVPSVQGGQLPPVNNSQFPAAPASTAPMPGAQSGAMAANA
LDVTKESMVGSWRVNGSCDMFLTLTNLGSGSRGGTRGCVGELTAMGSWEVAGKQVLLKDRSGNQLGSVYKTADNRFEGQT
STGQQISLSR

Sequences:

>Translated_170_residues
MQLRYAMTGLVVALALAGCQRTAYDYNSSPNAGPAPLTAQPVPSVQGGQLPPVNNSQFPAAPASTAPMPGAQSGAMAANA
LDVTKESMVGSWRVNGSCDMFLTLTNLGSGSRGGTRGCVGELTAMGSWEVAGKQVLLKDRSGNQLGSVYKTADNRFEGQT
STGQQISLSR
>Mature_170_residues
MQLRYAMTGLVVALALAGCQRTAYDYNSSPNAGPAPLTAQPVPSVQGGQLPPVNNSQFPAAPASTAPMPGAQSGAMAANA
LDVTKESMVGSWRVNGSCDMFLTLTNLGSGSRGGTRGCVGELTAMGSWEVAGKQVLLKDRSGNQLGSVYKTADNRFEGQT
STGQQISLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp19 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003086
- InterPro:   IPR021140
- InterPro:   IPR010571
- InterPro:   IPR016085 [H]

Pfam domain/function: PF02974 Inh [H]

EC number: NA

Molecular weight: Translated: 17513; Mature: 17513

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRYAMTGLVVALALAGCQRTAYDYNSSPNAGPAPLTAQPVPSVQGGQLPPVNNSQFPA
CCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APASTAPMPGAQSGAMAANALDVTKESMVGSWRVNGSCDMFLTLTNLGSGSRGGTRGCVG
CCCCCCCCCCCCCCCEEHHHHHHHHHHHCEEEEECCCCEEEEEEECCCCCCCCCCCCHHH
ELTAMGSWEVAGKQVLLKDRSGNQLGSVYKTADNRFEGQTSTGQQISLSR
HHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MQLRYAMTGLVVALALAGCQRTAYDYNSSPNAGPAPLTAQPVPSVQGGQLPPVNNSQFPA
CCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APASTAPMPGAQSGAMAANALDVTKESMVGSWRVNGSCDMFLTLTNLGSGSRGGTRGCVG
CCCCCCCCCCCCCCCEEHHHHHHHHHHHCEEEEECCCCEEEEEEECCCCCCCCCCCCHHH
ELTAMGSWEVAGKQVLLKDRSGNQLGSVYKTADNRFEGQTSTGQQISLSR
HHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]