| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is tauC [C]
Identifier: 209551217
GI number: 209551217
Start: 3774131
End: 3774937
Strand: Direct
Name: tauC [C]
Synonym: Rleg2_3645
Alternate gene names: 209551217
Gene position: 3774131-3774937 (Clockwise)
Preceding gene: 209551206
Following gene: 209551218
Centisome position: 83.17
GC content: 62.83
Gene sequence:
>807_bases ATGACATCGCCGCAACCATCGGATTCGCGCCTTGCCGCGCTCCGCGCCGCTCTCTACCGGGGGTTACCCGCTTTGCTCGC GGGCTGCGCCTTTTTGGCAGCATGGGAACTCTATGTCGATCTTTCCGGCATCAAGCCTTCCATTCTGCCGGCGCCTTCGC GCATCGTCATCCAGGGCTGGCTGAACCGTGAGGCGCTGATATCAAACACCTGGCCGACGCTTGGTGCGACACTCGGCGGT TTCGCGCTGTCACTTGCCTTCGCCTTCACCGCGTCGATCCTCATGGATTTCATGCCTTTCATGCGCCGGGCATTGCTGCC GATCTTCATCGCCAGCCAGACCCTGCCGCTGGTGGCGATCGCGCCGCTCGTCGTCTTATGGTTCGGTTTCGGCCTTTTGC CGAAGATCCTGCTGGTGGCGCTCGTCACCTTCTTCCCGCTGCTCGTCGCCCTGCTGCAGGGCTATGAATCGACCGACCGC GACATTGCCGAATTGCTGCATTCGATGAAGGCGAGCCGCTGGCGCATCTTCCGCCTGGCACGGCTTCCCTCGGCGCTGCC CTATTTCTTCGCCGGCCTGAGGATCTCGATCACCTATGCCGTCGTCGGCGCGATCTTTGCCGAATATGCCGGCGCCGCAA GCGGCCTCGGCATTTATATCCTCAACGCCAAAAACAATTTCCGTCCCGATCTCGTGCTCGCCGCCGTCGTCGTCAGCGCT GTGCTGACCCTCTGCCTGTTCGGCCTGACGCTCGTCATCCAGCGCCTCCTCATGCCCTGGCAGCCCATCGCGGAGCGGCG CCGATGA
Upstream 100 bases:
>100_bases ATCCGATGTCCGGCAATGTCGTCGGCATCATTCGCGATGCCGTCAAGACGCTCGATCCCTATCGCGACCGGCTGGACATC GAGACCGAAATCAAACGCTG
Downstream 100 bases:
>100_bases GCGACAAGATGGTTGAGCTGCGCAATATCTCCAAGTCCTTCGACGGCATGCAGGTGCTCGGCGATATTTCGCTCAGCGTC GCCAACGGCGAATTCGTTTC
Product: binding-protein-dependent transporters inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTSPQPSDSRLAALRAALYRGLPALLAGCAFLAAWELYVDLSGIKPSILPAPSRIVIQGWLNREALISNTWPTLGATLGG FALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGLLPKILLVALVTFFPLLVALLQGYESTDR DIAELLHSMKASRWRIFRLARLPSALPYFFAGLRISITYAVVGAIFAEYAGAASGLGIYILNAKNNFRPDLVLAAVVVSA VLTLCLFGLTLVIQRLLMPWQPIAERRR
Sequences:
>Translated_268_residues MTSPQPSDSRLAALRAALYRGLPALLAGCAFLAAWELYVDLSGIKPSILPAPSRIVIQGWLNREALISNTWPTLGATLGG FALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGLLPKILLVALVTFFPLLVALLQGYESTDR DIAELLHSMKASRWRIFRLARLPSALPYFFAGLRISITYAVVGAIFAEYAGAASGLGIYILNAKNNFRPDLVLAAVVVSA VLTLCLFGLTLVIQRLLMPWQPIAERRR >Mature_267_residues TSPQPSDSRLAALRAALYRGLPALLAGCAFLAAWELYVDLSGIKPSILPAPSRIVIQGWLNREALISNTWPTLGATLGGF ALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAIAPLVVLWFGFGLLPKILLVALVTFFPLLVALLQGYESTDRD IAELLHSMKASRWRIFRLARLPSALPYFFAGLRISITYAVVGAIFAEYAGAASGLGIYILNAKNNFRPDLVLAAVVVSAV LTLCLFGLTLVIQRLLMPWQPIAERRR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=27.7310924369748, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1786564, Length=245, Percent_Identity=30.6122448979592, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29274; Mature: 29143
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPQPSDSRLAALRAALYRGLPALLAGCAFLAAWELYVDLSGIKPSILPAPSRIVIQGW CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHH LNREALISNTWPTLGATLGGFALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAI CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH APLVVLWFGFGLLPKILLVALVTFFPLLVALLQGYESTDRDIAELLHSMKASRWRIFRLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLPSALPYFFAGLRISITYAVVGAIFAEYAGAASGLGIYILNAKNNFRPDLVLAAVVVSA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH VLTLCLFGLTLVIQRLLMPWQPIAERRR HHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure TSPQPSDSRLAALRAALYRGLPALLAGCAFLAAWELYVDLSGIKPSILPAPSRIVIQGW CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHH LNREALISNTWPTLGATLGGFALSLAFAFTASILMDFMPFMRRALLPIFIASQTLPLVAI CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH APLVVLWFGFGLLPKILLVALVTFFPLLVALLQGYESTDRDIAELLHSMKASRWRIFRLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLPSALPYFFAGLRISITYAVVGAIFAEYAGAASGLGIYILNAKNNFRPDLVLAAVVVSA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH VLTLCLFGLTLVIQRLLMPWQPIAERRR HHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]