| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is arcB [H]
Identifier: 209551203
GI number: 209551203
Start: 3757616
End: 3758551
Strand: Direct
Name: arcB [H]
Synonym: Rleg2_3629
Alternate gene names: 209551203
Gene position: 3757616-3758551 (Clockwise)
Preceding gene: 209551201
Following gene: 209551204
Centisome position: 82.8
GC content: 64.85
Gene sequence:
>936_bases ATGAATGCCCAATCGCAATCTGTCACCCTTATCGGCGCGCCGCTGGAAGAAGGCTCCGGCCGCAGGGGCGCGGCCATGGG CCCGGCGGCCCTGCGCATCGCCGGCGTCGATCAGACGTTGATCGAGCTCGGCCACGACGTCGCCGATCTCGGCGATCTCA GGATCGTACCGGCGATGGATCTACCGAATCATCCGAAGGCCCATAATCTGAGAACCGTCGGCGCCTTCACGCGGGCGCTC GAAAGCAGCGTCCATGACGTCGCCGCCTCGGGCCGCTTTCCGCTCATTCTCGGCGGCGACCACAGCCTCTCCATGGGCAG TGTCTCCGGCATGGCGCGTTACGCCGCCGGCAAGGGCCGCCCGCTTTTCGTGCTCTGGCTCGATGCCCATGCCGATTTCA ACTCTCCGGCCACTTCGCCTTCCGGCAATATTCACGGCATGCCCGTCGCGTTCTTCTGCGGCGAGGCGGAGTTCGCCGAG ATCCTGCCGAGGGATCGTGCCTTCGTCGACCCGAAGAATGTCTTCCAGGTCGGCATCCGTTCGGTCGATGCGCGTGAGCG CGAGGAAATCCACGAACACGGCGTCAACGTCTTCGATATGCGCGCGATCGACGAGCAGGGCATCGGCGCCATCATGCGTG AGATCCTCGATGTGGTCGCCAAGGCGAACGGCCTGCTGCATGTCAGCCTCGATCTCGATTTCCTCGATCCCGAAATTGCC CCCGGCGTCGGCACGACGGTGCCTGGCGGCGCGACCTTCCGCGAGGCGCATCTGGTGATGGAAATGCTGTCCGACAGCGG CCTCGTCTCGTCGCTCGATCTCGTCGAACTCAATCCGTTTCTCGACGATCGCGGCAAGAGCGCCCGCGTCCTGGTGGAAC TGACGGCAAGCCTCTTCGGCCGCCGCATCTTCGATCGCCCAACCCGCGCCGCATAG
Upstream 100 bases:
>100_bases ATTTGCGCAATCATAATCCATTTCTGACACTTTTCCATCTTTTTGCCGTCAGCCCTTTATCCCACTATCAGCCAAACCGG CCTCACCACGGAGCCCTCGA
Downstream 100 bases:
>100_bases TAGGCGCGCCCGCCTATCGGCATCATGATCTAGAGGGGGAAGAACCATGAACACTTCGGAAAAACTGATCGCCACCGAAC AGCGTCTCGGCGCCCACAAT
Product: arginase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MNAQSQSVTLIGAPLEEGSGRRGAAMGPAALRIAGVDQTLIELGHDVADLGDLRIVPAMDLPNHPKAHNLRTVGAFTRAL ESSVHDVAASGRFPLILGGDHSLSMGSVSGMARYAAGKGRPLFVLWLDAHADFNSPATSPSGNIHGMPVAFFCGEAEFAE ILPRDRAFVDPKNVFQVGIRSVDAREREEIHEHGVNVFDMRAIDEQGIGAIMREILDVVAKANGLLHVSLDLDFLDPEIA PGVGTTVPGGATFREAHLVMEMLSDSGLVSSLDLVELNPFLDDRGKSARVLVELTASLFGRRIFDRPTRAA
Sequences:
>Translated_311_residues MNAQSQSVTLIGAPLEEGSGRRGAAMGPAALRIAGVDQTLIELGHDVADLGDLRIVPAMDLPNHPKAHNLRTVGAFTRAL ESSVHDVAASGRFPLILGGDHSLSMGSVSGMARYAAGKGRPLFVLWLDAHADFNSPATSPSGNIHGMPVAFFCGEAEFAE ILPRDRAFVDPKNVFQVGIRSVDAREREEIHEHGVNVFDMRAIDEQGIGAIMREILDVVAKANGLLHVSLDLDFLDPEIA PGVGTTVPGGATFREAHLVMEMLSDSGLVSSLDLVELNPFLDDRGKSARVLVELTASLFGRRIFDRPTRAA >Mature_311_residues MNAQSQSVTLIGAPLEEGSGRRGAAMGPAALRIAGVDQTLIELGHDVADLGDLRIVPAMDLPNHPKAHNLRTVGAFTRAL ESSVHDVAASGRFPLILGGDHSLSMGSVSGMARYAAGKGRPLFVLWLDAHADFNSPATSPSGNIHGMPVAFFCGEAEFAE ILPRDRAFVDPKNVFQVGIRSVDAREREEIHEHGVNVFDMRAIDEQGIGAIMREILDVVAKANGLLHVSLDLDFLDPEIA PGVGTTVPGGATFREAHLVMEMLSDSGLVSSLDLVELNPFLDDRGKSARVLVELTASLFGRRIFDRPTRAA
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family [H]
Homologues:
Organism=Homo sapiens, GI10947139, Length=316, Percent_Identity=37.3417721518987, Blast_Score=201, Evalue=5e-52, Organism=Homo sapiens, GI4502215, Length=316, Percent_Identity=37.6582278481013, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI37537722, Length=305, Percent_Identity=28.5245901639344, Blast_Score=78, Evalue=8e-15, Organism=Escherichia coli, GI1789306, Length=278, Percent_Identity=24.8201438848921, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71996843, Length=254, Percent_Identity=29.9212598425197, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6325146, Length=306, Percent_Identity=31.6993464052288, Blast_Score=154, Evalue=1e-38, Organism=Drosophila melanogaster, GI24638886, Length=322, Percent_Identity=34.1614906832298, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014033 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.1 [H]
Molecular weight: Translated: 33198; Mature: 33198
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQSQSVTLIGAPLEEGSGRRGAAMGPAALRIAGVDQTLIELGHDVADLGDLRIVPAMD CCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHCCCCEEEEECCC LPNHPKAHNLRTVGAFTRALESSVHDVAASGRFPLILGGDHSLSMGSVSGMARYAAGKGR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCC PLFVLWLDAHADFNSPATSPSGNIHGMPVAFFCGEAEFAEILPRDRAFVDPKNVFQVGIR EEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHH SVDAREREEIHEHGVNVFDMRAIDEQGIGAIMREILDVVAKANGLLHVSLDLDFLDPEIA CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECEECCCCCC PGVGTTVPGGATFREAHLVMEMLSDSGLVSSLDLVELNPFLDDRGKSARVLVELTASLFG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCEEHHHHHHHHHH RRIFDRPTRAA HHHHCCCCCCC >Mature Secondary Structure MNAQSQSVTLIGAPLEEGSGRRGAAMGPAALRIAGVDQTLIELGHDVADLGDLRIVPAMD CCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHHCCCCEEEEECCC LPNHPKAHNLRTVGAFTRALESSVHDVAASGRFPLILGGDHSLSMGSVSGMARYAAGKGR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCC PLFVLWLDAHADFNSPATSPSGNIHGMPVAFFCGEAEFAEILPRDRAFVDPKNVFQVGIR EEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHHH SVDAREREEIHEHGVNVFDMRAIDEQGIGAIMREILDVVAKANGLLHVSLDLDFLDPEIA CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECEECCCCCC PGVGTTVPGGATFREAHLVMEMLSDSGLVSSLDLVELNPFLDDRGKSARVLVELTASLFG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCEEHHHHHHHHHH RRIFDRPTRAA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9375792 [H]