| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is hemA [H]
Identifier: 209551198
GI number: 209551198
Start: 3746407
End: 3747621
Strand: Reverse
Name: hemA [H]
Synonym: Rleg2_3624
Alternate gene names: 209551198
Gene position: 3747621-3746407 (Counterclockwise)
Preceding gene: 209551202
Following gene: 209551197
Centisome position: 82.58
GC content: 61.56
Gene sequence:
>1215_bases ATGGATTTCGAAGCGTTTTTCAAAAACGAGTTGGACGGGCTTCATGCCGAGGGCCGTTACCGCGTTTTTGCCGATCTCGA GCGTCACCGCGGCAATTTTCCGCGCGCGACGCGCCATACGGCCGATGGCGAAAAGGAAGTCACGGTCTGGTGCTCCAACG ACTATCTCGGCATGGGCCAGAACCCGAAGGTGATCGAGGCGATGAAAAACGCCATCGACCACTGTGGCGCGGGTGCGGGA GGCACCCGGAATATTTCTGGCACCAACCACTACCACGTCATGCTCGAGCGTGAGCTTGCCGATCTGCACGCCAAGGAAGC AGCGCTGATCTTCACCTCGGGCTATGTGTCCAACTGGGCAGCGCTCGGCACGCTTGGCGCCAAGATCCCCGGCCTGATCA TCTTCTCCGACGCGCTGAACCATGCCTCGATGATCGAGGGCATCCGCCATGCCAAATGCGACAAGGTGATCTGGAAGCAC AATGACGTCGCCGATCTCGAAGCCAAGCTTAAGGCCGCCGATCCGAAGGCGCCGAAGCTGATCGCCTTCGAAAGCGTCTA TTCGATGGACGGCGATATCGCCCCGATCAAGGAAATCTGCGACCTCGCCGATAAATACGGCGCGATGACCTATCTCGACG AAGTGCATGCGGTCGGCATGTACGGCCCGCGCGGCGGCGGCATAGCCGAACGCGAGGGGCTGATGGACCGGCTGACTGTC ATCGAGGGCACGCTCGGCAAGGCTTTCGGGGTGATGGGCGGTTATATCGCCGCGTCTTCAGCGCTTTGCGATTTCATCCG TTCCTTCGCCTCCGGCTTCATCTTCACTACGGCGCTGCCGCCGGCGCTTGCCGCCGGTGCCGTCGCCTCGATCCAGCATC TGAAGGTCAGCCAGTTCGAGCGCGCCCGCCATCAGGACCGGGTGCGCAAACTCCGGATGCTGCTCGATCAGAGCGGCATT CCGCATGTGCCCAATCCGAGCCATATCGTGCCGGTGCTTGTCGGCGATGCCGCCAAATGCAAGTGGATTTCCGACCTGCT GCTCGACAATTGCGGCGTCTACGTCCAGCCGATCAACTATCCCACCGTGCCGAAGAAGACCGAACGCTTGCGCATCACGC CGACGCCGCTGCATTCCGATGCCGACATCGCCCATCTGGTCGAGGCGCTGCATTCGCTCTGGTCGCGCTGCGCGCTGGCA AGACACGTCGCCTGA
Upstream 100 bases:
>100_bases AAACTGGGCCTTTTGCCGCAGTTGATGTTAAAGCAAAGGGTAAGCATTGACGCGCGGACGTCCGGTCGGCAAGAACGGCC GCGCGATACTGGAGCAGATG
Downstream 100 bases:
>100_bases TTTTTCGATGATCGCGCCGTTCAGGACCTCCCTTGGAGGTCCTGACGGTGATCGGCTGTGCGCCTCTGCGGCCGGCCAAC CTTCCCTATCCTGACCCAGA
Product: 5-aminolevulinate synthase
Products: NA
Alternate protein names: 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase [H]
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MDFEAFFKNELDGLHAEGRYRVFADLERHRGNFPRATRHTADGEKEVTVWCSNDYLGMGQNPKVIEAMKNAIDHCGAGAG GTRNISGTNHYHVMLERELADLHAKEAALIFTSGYVSNWAALGTLGAKIPGLIIFSDALNHASMIEGIRHAKCDKVIWKH NDVADLEAKLKAADPKAPKLIAFESVYSMDGDIAPIKEICDLADKYGAMTYLDEVHAVGMYGPRGGGIAEREGLMDRLTV IEGTLGKAFGVMGGYIAASSALCDFIRSFASGFIFTTALPPALAAGAVASIQHLKVSQFERARHQDRVRKLRMLLDQSGI PHVPNPSHIVPVLVGDAAKCKWISDLLLDNCGVYVQPINYPTVPKKTERLRITPTPLHSDADIAHLVEALHSLWSRCALA RHVA
Sequences:
>Translated_404_residues MDFEAFFKNELDGLHAEGRYRVFADLERHRGNFPRATRHTADGEKEVTVWCSNDYLGMGQNPKVIEAMKNAIDHCGAGAG GTRNISGTNHYHVMLERELADLHAKEAALIFTSGYVSNWAALGTLGAKIPGLIIFSDALNHASMIEGIRHAKCDKVIWKH NDVADLEAKLKAADPKAPKLIAFESVYSMDGDIAPIKEICDLADKYGAMTYLDEVHAVGMYGPRGGGIAEREGLMDRLTV IEGTLGKAFGVMGGYIAASSALCDFIRSFASGFIFTTALPPALAAGAVASIQHLKVSQFERARHQDRVRKLRMLLDQSGI PHVPNPSHIVPVLVGDAAKCKWISDLLLDNCGVYVQPINYPTVPKKTERLRITPTPLHSDADIAHLVEALHSLWSRCALA RHVA >Mature_404_residues MDFEAFFKNELDGLHAEGRYRVFADLERHRGNFPRATRHTADGEKEVTVWCSNDYLGMGQNPKVIEAMKNAIDHCGAGAG GTRNISGTNHYHVMLERELADLHAKEAALIFTSGYVSNWAALGTLGAKIPGLIIFSDALNHASMIEGIRHAKCDKVIWKH NDVADLEAKLKAADPKAPKLIAFESVYSMDGDIAPIKEICDLADKYGAMTYLDEVHAVGMYGPRGGGIAEREGLMDRLTV IEGTLGKAFGVMGGYIAASSALCDFIRSFASGFIFTTALPPALAAGAVASIQHLKVSQFERARHQDRVRKLRMLLDQSGI PHVPNPSHIVPVLVGDAAKCKWISDLLLDNCGVYVQPINYPTVPKKTERLRITPTPLHSDADIAHLVEALHSLWSRCALA RHVA
Specific function: Unknown
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI83977442, Length=403, Percent_Identity=48.3870967741936, Blast_Score=404, Evalue=1e-112, Organism=Homo sapiens, GI83977440, Length=403, Percent_Identity=48.3870967741936, Blast_Score=403, Evalue=1e-112, Organism=Homo sapiens, GI83977444, Length=403, Percent_Identity=48.3870967741936, Blast_Score=403, Evalue=1e-112, Organism=Homo sapiens, GI4502025, Length=403, Percent_Identity=49.6277915632754, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI40316939, Length=403, Percent_Identity=49.6277915632754, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI7657118, Length=392, Percent_Identity=35.969387755102, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI284448556, Length=343, Percent_Identity=38.7755102040816, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI4758668, Length=373, Percent_Identity=30.8310991957105, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI119220554, Length=391, Percent_Identity=28.9002557544757, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI5454084, Length=259, Percent_Identity=30.1158301158301, Blast_Score=119, Evalue=4e-27, Organism=Escherichia coli, GI1790046, Length=393, Percent_Identity=35.3689567430025, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI1786993, Length=363, Percent_Identity=32.7823691460055, Blast_Score=165, Evalue=5e-42, Organism=Caenorhabditis elegans, GI71994529, Length=397, Percent_Identity=34.7607052896725, Blast_Score=232, Evalue=2e-61, Organism=Caenorhabditis elegans, GI32566772, Length=386, Percent_Identity=29.7927461139896, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17560914, Length=363, Percent_Identity=29.2011019283747, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17560912, Length=363, Percent_Identity=29.2011019283747, Blast_Score=130, Evalue=9e-31, Organism=Caenorhabditis elegans, GI71982617, Length=263, Percent_Identity=26.615969581749, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71982625, Length=263, Percent_Identity=26.615969581749, Blast_Score=98, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6320438, Length=424, Percent_Identity=49.2924528301887, Blast_Score=399, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6320267, Length=354, Percent_Identity=27.4011299435028, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323954, Length=285, Percent_Identity=25.9649122807018, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI17137420, Length=405, Percent_Identity=47.1604938271605, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI24662918, Length=358, Percent_Identity=34.9162011173184, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI17136286, Length=330, Percent_Identity=28.1818181818182, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24653280, Length=261, Percent_Identity=26.8199233716475, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653276, Length=261, Percent_Identity=26.8199233716475, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653278, Length=261, Percent_Identity=26.8199233716475, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010961 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.37 [H]
Molecular weight: Translated: 44099; Mature: 44099
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFEAFFKNELDGLHAEGRYRVFADLERHRGNFPRATRHTADGEKEVTVWCSNDYLGMGQ CCHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC NPKVIEAMKNAIDHCGAGAGGTRNISGTNHYHVMLERELADLHAKEAALIFTSGYVSNWA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCEEEEEECCHHHHHH ALGTLGAKIPGLIIFSDALNHASMIEGIRHAKCDKVIWKHNDVADLEAKLKAADPKAPKL HHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCE IAFESVYSMDGDIAPIKEICDLADKYGAMTYLDEVHAVGMYGPRGGGIAEREGLMDRLTV EEEHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH IEGTLGKAFGVMGGYIAASSALCDFIRSFASGFIFTTALPPALAAGAVASIQHLKVSQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHH RARHQDRVRKLRMLLDQSGIPHVPNPSHIVPVLVGDAAKCKWISDLLLDNCGVYVQPINY HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCC PTVPKKTERLRITPTPLHSDADIAHLVEALHSLWSRCALARHVA CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFEAFFKNELDGLHAEGRYRVFADLERHRGNFPRATRHTADGEKEVTVWCSNDYLGMGQ CCHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC NPKVIEAMKNAIDHCGAGAGGTRNISGTNHYHVMLERELADLHAKEAALIFTSGYVSNWA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCEEEEEECCHHHHHH ALGTLGAKIPGLIIFSDALNHASMIEGIRHAKCDKVIWKHNDVADLEAKLKAADPKAPKL HHHHHCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCE IAFESVYSMDGDIAPIKEICDLADKYGAMTYLDEVHAVGMYGPRGGGIAEREGLMDRLTV EEEHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH IEGTLGKAFGVMGGYIAASSALCDFIRSFASGFIFTTALPPALAAGAVASIQHLKVSQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHH RARHQDRVRKLRMLLDQSGIPHVPNPSHIVPVLVGDAAKCKWISDLLLDNCGVYVQPINY HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCC PTVPKKTERLRITPTPLHSDADIAHLVEALHSLWSRCALARHVA CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2034217 [H]