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The map label for this gene is yjiA [H]

Identifier: 209551181

GI number: 209551181

Start: 3730386

End: 3731570

Strand: Reverse

Name: yjiA [H]

Synonym: Rleg2_3607

Alternate gene names: 209551181

Gene position: 3731570-3730386 (Counterclockwise)

Preceding gene: 209551182

Following gene: 209551180

Centisome position: 82.23

GC content: 62.11

Gene sequence:

>1185_bases
ATGAGCGCGCTCAACGACAGGATTCCGGTCACCATCCTGACCGGCTTTCTCGGCGCCGGCAAATCGACGCTGCTCAACCG
CATCCTCAAAGATCCCGCAATGAAGGATGCGGCCGTCGTCATCAATGAATTCGGCGATGTCGGCATCGATCATCTCCTGG
TCGAAAGCTCGGGCGATTCGATCATCGAACTCTCGGACGGCTGCCTCTGCTGCACCGTGCGCGGCGAGCTTGTGGATACA
CTGGCAAACCTGATGGATGCGGTTCAGACGGGCCGGGTCAAGCCGGTGAAGCGTGTCGTCATCGAAACGACCGGCCTTGC
CGATCCCGCTCCGGTCATGCAGGCGATCATGGGCAATCCCATCATCGCCACGAATTTCGAGCTCGACGGCGTCGTGACTG
TGGTGGATGCGGTGAACGGGCTGCAAACCCTCGACAATCACGAGGAAGCGCGCAAGCAGGCGGCGGTCGCCGATCGGCTG
ATCGTCTCGAAGAAGGCGATGGCCGCGGCAACGGACGAGCTGGAACAGCGGCTGCGGGCGCTCAATCCACGCGCCGCGAT
GATGGATGCCGACAGTGCTGAGGCCGGCAGCGCCGCGGTGCTCGTCAACGGGCTCTACGATCCGGCGACGAAGATCGCCG
ATGTCGGCCGCTGGCTGCAGGACGAGGATGCGCACGAGGCGCATCCCCACCACGATCATACTCATCATCATGATGGGGAT
CACCACGGCCACCACCATCATGATCATCACAATCATGATCATGATGGCGATCACGCGCATCAGGACCCGCACGACGTCAA
CCGTCACGATGCCTCGATCCGCTCTTTCTCGATCATCGAGGAGAAGCCGATCGATCCGATGGCGCTCGACATGTTCATCG
ATCTGCTACGCTCCGCCCATGGCGAGAAGCTGCTCAGGATGAAGGCGATCGTTTCCGTCTCCGACCGGCCGGATCGGCCG
CTGGTGCTGCATGGCGTGCAAAGCATCTTCCATCCGCCGGTGCGGCTTGCCGCCTGGCCGGATCCCAGCGACCGGCGCAC
GCGCATGGTGTTGATCACCAAGGATCTGCCGGAAGCCTTCGTGAAGGATCTGTTCGACGCCTTTCTCGGCAAGCCACGCA
TCGACATGCCGGATCGCGCGGCGCTGTCCGATAATCCGCTCGCCATTCCCGGCATGCGGATTTAG

Upstream 100 bases:

>100_bases
AAAAGGTGGCGACCGGCGATACGGCGGGCGGCATCGCCAACGTGCCGGTGCCGATGCCGCGCCCGACATCTTTCTAAGAT
AAGTTTCAAGGTCAAACGAC

Downstream 100 bases:

>100_bases
CTGTGGAACTGATCTTATCGCGCCCGCCGATTTTCCTGTTGAGTAGTCATGCGGCGTGGACATGGCGAAGCCGAGCGACT
GAAGACGGTCGAGGACGAGG

Product: cobalamin synthesis protein P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MSALNDRIPVTILTGFLGAGKSTLLNRILKDPAMKDAAVVINEFGDVGIDHLLVESSGDSIIELSDGCLCCTVRGELVDT
LANLMDAVQTGRVKPVKRVVIETTGLADPAPVMQAIMGNPIIATNFELDGVVTVVDAVNGLQTLDNHEEARKQAAVADRL
IVSKKAMAAATDELEQRLRALNPRAAMMDADSAEAGSAAVLVNGLYDPATKIADVGRWLQDEDAHEAHPHHDHTHHHDGD
HHGHHHHDHHNHDHDGDHAHQDPHDVNRHDASIRSFSIIEEKPIDPMALDMFIDLLRSAHGEKLLRMKAIVSVSDRPDRP
LVLHGVQSIFHPPVRLAAWPDPSDRRTRMVLITKDLPEAFVKDLFDAFLGKPRIDMPDRAALSDNPLAIPGMRI

Sequences:

>Translated_394_residues
MSALNDRIPVTILTGFLGAGKSTLLNRILKDPAMKDAAVVINEFGDVGIDHLLVESSGDSIIELSDGCLCCTVRGELVDT
LANLMDAVQTGRVKPVKRVVIETTGLADPAPVMQAIMGNPIIATNFELDGVVTVVDAVNGLQTLDNHEEARKQAAVADRL
IVSKKAMAAATDELEQRLRALNPRAAMMDADSAEAGSAAVLVNGLYDPATKIADVGRWLQDEDAHEAHPHHDHTHHHDGD
HHGHHHHDHHNHDHDGDHAHQDPHDVNRHDASIRSFSIIEEKPIDPMALDMFIDLLRSAHGEKLLRMKAIVSVSDRPDRP
LVLHGVQSIFHPPVRLAAWPDPSDRRTRMVLITKDLPEAFVKDLFDAFLGKPRIDMPDRAALSDNPLAIPGMRI
>Mature_393_residues
SALNDRIPVTILTGFLGAGKSTLLNRILKDPAMKDAAVVINEFGDVGIDHLLVESSGDSIIELSDGCLCCTVRGELVDTL
ANLMDAVQTGRVKPVKRVVIETTGLADPAPVMQAIMGNPIIATNFELDGVVTVVDAVNGLQTLDNHEEARKQAAVADRLI
VSKKAMAAATDELEQRLRALNPRAAMMDADSAEAGSAAVLVNGLYDPATKIADVGRWLQDEDAHEAHPHHDHTHHHDGDH
HGHHHHDHHNHDHDGDHAHQDPHDVNRHDASIRSFSIIEEKPIDPMALDMFIDLLRSAHGEKLLRMKAIVSVSDRPDRPL
VLHGVQSIFHPPVRLAAWPDPSDRRTRMVLITKDLPEAFVKDLFDAFLGKPRIDMPDRAALSDNPLAIPGMRI

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=394, Percent_Identity=27.4111675126904, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI33469141, Length=391, Percent_Identity=27.6214833759591, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI148727351, Length=391, Percent_Identity=27.6214833759591, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI146231952, Length=392, Percent_Identity=28.3163265306122, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI223941779, Length=205, Percent_Identity=34.6341463414634, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI223941776, Length=375, Percent_Identity=26.4, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI119120938, Length=148, Percent_Identity=39.8648648648649, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI87082430, Length=362, Percent_Identity=29.0055248618785, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788499, Length=173, Percent_Identity=34.6820809248555, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6324356, Length=208, Percent_Identity=32.2115384615385, Blast_Score=102, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 43113; Mature: 42982

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALNDRIPVTILTGFLGAGKSTLLNRILKDPAMKDAAVVINEFGDVGIDHLLVESSGDS
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEECCCCC
IIELSDGCLCCTVRGELVDTLANLMDAVQTGRVKPVKRVVIETTGLADPAPVMQAIMGNP
EEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCC
IIATNFELDGVVTVVDAVNGLQTLDNHEEARKQAAVADRLIVSKKAMAAATDELEQRLRA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNPRAAMMDADSAEAGSAAVLVNGLYDPATKIADVGRWLQDEDAHEAHPHHDHTHHHDGD
CCCCHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
HHGHHHHDHHNHDHDGDHAHQDPHDVNRHDASIRSFSIIEEKPIDPMALDMFIDLLRSAH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHEEHHHCCCCCHHHHHHHHHHHHHHC
GEKLLRMKAIVSVSDRPDRPLVLHGVQSIFHPPVRLAAWPDPSDRRTRMVLITKDLPEAF
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCHHHHH
VKDLFDAFLGKPRIDMPDRAALSDNPLAIPGMRI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SALNDRIPVTILTGFLGAGKSTLLNRILKDPAMKDAAVVINEFGDVGIDHLLVESSGDS
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEECCCCC
IIELSDGCLCCTVRGELVDTLANLMDAVQTGRVKPVKRVVIETTGLADPAPVMQAIMGNP
EEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCC
IIATNFELDGVVTVVDAVNGLQTLDNHEEARKQAAVADRLIVSKKAMAAATDELEQRLRA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNPRAAMMDADSAEAGSAAVLVNGLYDPATKIADVGRWLQDEDAHEAHPHHDHTHHHDGD
CCCCHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
HHGHHHHDHHNHDHDGDHAHQDPHDVNRHDASIRSFSIIEEKPIDPMALDMFIDLLRSAH
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHEEHHHCCCCCHHHHHHHHHHHHHHC
GEKLLRMKAIVSVSDRPDRPLVLHGVQSIFHPPVRLAAWPDPSDRRTRMVLITKDLPEAF
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCHHHHH
VKDLFDAFLGKPRIDMPDRAALSDNPLAIPGMRI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]