| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is aroK
Identifier: 209551172
GI number: 209551172
Start: 3721906
End: 3722496
Strand: Reverse
Name: aroK
Synonym: Rleg2_3596
Alternate gene names: 209551172
Gene position: 3722496-3721906 (Counterclockwise)
Preceding gene: 209551179
Following gene: 209551171
Centisome position: 82.03
GC content: 62.27
Gene sequence:
>591_bases ATGAGTGAACCACTGCTGACCGTTGCTGACAGCTTGAAAGACAGAGCTCGCGCCGCGCTCGGTTCACGCAATCTGATCCT CGTCGGCCTGATGGGTGCGGGAAAATCCGCCGTCGGCCGCATCGTCGCCAGTCAGCTCGGCATTCCCTTCATCGACAGCG ACCACGAAATAGAGCGCGTGTCGCGCATGACGATCCCCGAACTTTTCGCGGCCTATGGCGAGGACGAATTCCGGGCGCTG GAAACGCGGGTGATGAAGCGGCTCTTAAAGGGCGGGCCGCGGGTCGTCTCCACCGGCGGCGGCGCCTTCATCAACGAGCG GACGCGCAGGCATATCATCAAGGGCGGCGTCTCCGTCTGGCTGAAGGCCGATCTCGACGTGCTCTGGGAGCGGGTCAACA AGCGCGACAACCGCCCCTTGCTCAAGACCGAAAACCCCAAGCAGACGCTCGAAGGCCTGATGAATGCGCGCTACCCGATC TATGCGCAGGCCGACCTCACCGTGCTCTCGCGCGACGTGCGCAAGGAAATCATGGCCGACGAGGTGCTGAAGGCGATGAT CGAAGCTCAGAAGGAAAGTGCAGCGTCATGA
Upstream 100 bases:
>100_bases AGTGCAAGAAGCGGTATTCAAGCCATGATTCCCTTGTCCGCGACTTGACGCTCCAGCTGCATTTGTCGATACGGTTTGCA AACAAAGTGTGAATGGACCG
Downstream 100 bases:
>100_bases ATGCGATACCCTCCGCCTCATCAGTCCAGACGGTGCACGTGCCGCTCGGCGAGCGCGCCTACGATATCCTGATCGGGCCG GGGCTGATCGCGCGGGCCGG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSEPLLTVADSLKDRARAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERVSRMTIPELFAAYGEDEFRAL ETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDVLWERVNKRDNRPLLKTENPKQTLEGLMNARYPI YAQADLTVLSRDVRKEIMADEVLKAMIEAQKESAAS
Sequences:
>Translated_196_residues MSEPLLTVADSLKDRARAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERVSRMTIPELFAAYGEDEFRAL ETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDVLWERVNKRDNRPLLKTENPKQTLEGLMNARYPI YAQADLTVLSRDVRKEIMADEVLKAMIEAQKESAAS >Mature_195_residues SEPLLTVADSLKDRARAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERVSRMTIPELFAAYGEDEFRALE TRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDVLWERVNKRDNRPLLKTENPKQTLEGLMNARYPIY AQADLTVLSRDVRKEIMADEVLKAMIEAQKESAAS
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=169, Percent_Identity=37.2781065088757, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1786587, Length=143, Percent_Identity=28.6713286713287, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_RHILW (B5ZSI5)
Other databases:
- EMBL: CP001191 - RefSeq: YP_002283089.1 - ProteinModelPortal: B5ZSI5 - SMR: B5ZSI5 - GeneID: 6982357 - GenomeReviews: CP001191_GR - KEGG: rlt:Rleg2_3596 - HOGENOM: HBG335815 - OMA: VIYLRAN - ProtClustDB: PRK13946 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 21713; Mature: 21581
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 54-54 BINDING 78-78 BINDING 100-100 BINDING 138-138 BINDING 157-157 BINDING 174-174
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLLTVADSLKDRARAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHH SRMTIPELFAAYGEDEFRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVW HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHE LKADLDVLWERVNKRDNRPLLKTENPKQTLEGLMNARYPIYAQADLTVLSRDVRKEIMAD EHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH EVLKAMIEAQKESAAS HHHHHHHHHHHHHCCC >Mature Secondary Structure SEPLLTVADSLKDRARAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIERV CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHH SRMTIPELFAAYGEDEFRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVW HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHE LKADLDVLWERVNKRDNRPLLKTENPKQTLEGLMNARYPIYAQADLTVLSRDVRKEIMAD EHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH EVLKAMIEAQKESAAS HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA