| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551179
Identifier: 209551179
GI number: 209551179
Start: 3727846
End: 3729075
Strand: Reverse
Name: 209551179
Synonym: Rleg2_3603
Alternate gene names: NA
Gene position: 3729075-3727846 (Counterclockwise)
Preceding gene: 209551180
Following gene: 209551172
Centisome position: 82.18
GC content: 51.87
Gene sequence:
>1230_bases ATGTTGCGGAAGCTGCCGCCATTAATGGGATGGAGTATCTTGACAGTCTCTAAACCGCTTCAATTTACAATCTTCTTCTG TATTTCGTTGCTCACTCTTGCGGCTAAATCGGATGGTCAACAATCGGTCCCTAATCGTTGTTATCCGGGCATCGCTTGTC CGGACCGTGCAGGACAATCGTATGATTCAGATGACGTGATTGGGCCCGCTAAGCCAGACTTCGGTTTCACTCAGAACTTC GTTATCGACGGAGGTCAGAACCTTCTTTGGGCCCGCAATCTATACGCAGTCGGAGATACTACAAAGCTGTTCAAAGATGC CGCTTCCGGCAATCAGTCAGTGCGAGACGCATACTCAAATTTGAGTGAGAACGCCCACGGCTCTACCATCGGAGGTTTGA AGGGTTGGAGATTGGCGACCAAATCTGAAGTAGACACCTTGCTGGATAGCCTCGATGCGACGACCATATACGCTTACTTC CGTCCTAGAGTGGCGCAGATTCCGTACAGGTGGGTTTTTGCTACCTTTGACAATGAAGTCGGCTCGCAATCAATTCCGGT GGACGGTGTCGATTACGCGAATACTTCGCTCGGGCGATTGCCCGAGGGACGGCAACCAGGTTCACCGGAATTGAACCCAT ATGGGGTTTGGCTAGTAAAGGAAATGACGTCTGACGTTGAACGTGCAATGAAGCCGATAAAGGAGCCTCTACGTCAATTT CGCGAGCCGATCGAAGAGCGACGGGTAAAACCCTTAGCCACTTATTCGGTCTCGAAGACAGACGATCTGCTGAATCTCGA CGAAAGTTCGCGAATTGTTGCTACTGTAGTCACCAGACGAGCTCTCAATAGCCGATTTTATACGCGCTACAGCCTGAGGC CATTGCCGAGAGGCGCGCTCGTGACCGCTGAAGTGCCGATGAGCGCTCTGTCGTGGTCGGGCAGTCCTATGCCGACCATA AAAGTCGCAGTGCGGTCCGGATCAAACCAGTCAACGTCGGTGGAACAACTTTGGGAATTCGGAGGGAGTGATACCGTCGG TGTTTGGCAGCCTGCCAACCGCGCCAGATTGGAGTTGCCGGAACAGGTAGCTAGGAACGCCTACAATGTTGGCGACGATC TCGTATTAAGCTTCTCCGCCGACTTCAATGACTGCCAGTTCGCCGCTCCGGAGTTAATCATCCGGTATGTTCGAGAAGCT AACATTCTGTTCTTAAGACAGTTGCCATGA
Upstream 100 bases:
>100_bases ACAAGGGGAGATAACAACCCGGATATCAGGATCCATCACGGGACCAAGTCGGATCGAATGGGTTCTGTACTAAAGGGCTA TCTGAGTGGAGGAACTACCG
Downstream 100 bases:
>100_bases GTATGTCATCATTGCGGTTCAACGAGAGGAATGCGATTGGGATTCTGGAAATAACGGCCTCTTGCAGTGTCGGCCTGTAC CTCAAAACCGCGTTCACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQSYDSDDVIGPAKPDFGFTQNF VIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSNLSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYF RPRVAQIPYRWVFATFDNEVGSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGALVTAEVPMSALSWSGSPMPTI KVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELPEQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREA NILFLRQLP
Sequences:
>Translated_409_residues MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQSYDSDDVIGPAKPDFGFTQNF VIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSNLSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYF RPRVAQIPYRWVFATFDNEVGSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGALVTAEVPMSALSWSGSPMPTI KVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELPEQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREA NILFLRQLP >Mature_409_residues MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQSYDSDDVIGPAKPDFGFTQNF VIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSNLSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYF RPRVAQIPYRWVFATFDNEVGSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGALVTAEVPMSALSWSGSPMPTI KVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELPEQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREA NILFLRQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45376; Mature: 45376
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQS CCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC YDSDDVIGPAKPDFGFTQNFVIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSN CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEECCHHHHHHHHHCCCHHHHHHHHH LSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYFRPRVAQIPYRWVFATFDNEV HCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEEEEEECCCC GSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGAL HHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCE VTAEVPMSALSWSGSPMPTIKVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELP EEECCCHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCH EQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREANILFLRQLP HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCC >Mature Secondary Structure MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQS CCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC YDSDDVIGPAKPDFGFTQNFVIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSN CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEECCHHHHHHHHHCCCHHHHHHHHH LSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYFRPRVAQIPYRWVFATFDNEV HCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEEEEEECCCC GSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGAL HHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCE VTAEVPMSALSWSGSPMPTIKVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELP EEECCCHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCH EQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREANILFLRQLP HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA