Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is 209551179

Identifier: 209551179

GI number: 209551179

Start: 3727846

End: 3729075

Strand: Reverse

Name: 209551179

Synonym: Rleg2_3603

Alternate gene names: NA

Gene position: 3729075-3727846 (Counterclockwise)

Preceding gene: 209551180

Following gene: 209551172

Centisome position: 82.18

GC content: 51.87

Gene sequence:

>1230_bases
ATGTTGCGGAAGCTGCCGCCATTAATGGGATGGAGTATCTTGACAGTCTCTAAACCGCTTCAATTTACAATCTTCTTCTG
TATTTCGTTGCTCACTCTTGCGGCTAAATCGGATGGTCAACAATCGGTCCCTAATCGTTGTTATCCGGGCATCGCTTGTC
CGGACCGTGCAGGACAATCGTATGATTCAGATGACGTGATTGGGCCCGCTAAGCCAGACTTCGGTTTCACTCAGAACTTC
GTTATCGACGGAGGTCAGAACCTTCTTTGGGCCCGCAATCTATACGCAGTCGGAGATACTACAAAGCTGTTCAAAGATGC
CGCTTCCGGCAATCAGTCAGTGCGAGACGCATACTCAAATTTGAGTGAGAACGCCCACGGCTCTACCATCGGAGGTTTGA
AGGGTTGGAGATTGGCGACCAAATCTGAAGTAGACACCTTGCTGGATAGCCTCGATGCGACGACCATATACGCTTACTTC
CGTCCTAGAGTGGCGCAGATTCCGTACAGGTGGGTTTTTGCTACCTTTGACAATGAAGTCGGCTCGCAATCAATTCCGGT
GGACGGTGTCGATTACGCGAATACTTCGCTCGGGCGATTGCCCGAGGGACGGCAACCAGGTTCACCGGAATTGAACCCAT
ATGGGGTTTGGCTAGTAAAGGAAATGACGTCTGACGTTGAACGTGCAATGAAGCCGATAAAGGAGCCTCTACGTCAATTT
CGCGAGCCGATCGAAGAGCGACGGGTAAAACCCTTAGCCACTTATTCGGTCTCGAAGACAGACGATCTGCTGAATCTCGA
CGAAAGTTCGCGAATTGTTGCTACTGTAGTCACCAGACGAGCTCTCAATAGCCGATTTTATACGCGCTACAGCCTGAGGC
CATTGCCGAGAGGCGCGCTCGTGACCGCTGAAGTGCCGATGAGCGCTCTGTCGTGGTCGGGCAGTCCTATGCCGACCATA
AAAGTCGCAGTGCGGTCCGGATCAAACCAGTCAACGTCGGTGGAACAACTTTGGGAATTCGGAGGGAGTGATACCGTCGG
TGTTTGGCAGCCTGCCAACCGCGCCAGATTGGAGTTGCCGGAACAGGTAGCTAGGAACGCCTACAATGTTGGCGACGATC
TCGTATTAAGCTTCTCCGCCGACTTCAATGACTGCCAGTTCGCCGCTCCGGAGTTAATCATCCGGTATGTTCGAGAAGCT
AACATTCTGTTCTTAAGACAGTTGCCATGA

Upstream 100 bases:

>100_bases
ACAAGGGGAGATAACAACCCGGATATCAGGATCCATCACGGGACCAAGTCGGATCGAATGGGTTCTGTACTAAAGGGCTA
TCTGAGTGGAGGAACTACCG

Downstream 100 bases:

>100_bases
GTATGTCATCATTGCGGTTCAACGAGAGGAATGCGATTGGGATTCTGGAAATAACGGCCTCTTGCAGTGTCGGCCTGTAC
CTCAAAACCGCGTTCACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQSYDSDDVIGPAKPDFGFTQNF
VIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSNLSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYF
RPRVAQIPYRWVFATFDNEVGSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF
REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGALVTAEVPMSALSWSGSPMPTI
KVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELPEQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREA
NILFLRQLP

Sequences:

>Translated_409_residues
MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQSYDSDDVIGPAKPDFGFTQNF
VIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSNLSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYF
RPRVAQIPYRWVFATFDNEVGSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF
REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGALVTAEVPMSALSWSGSPMPTI
KVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELPEQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREA
NILFLRQLP
>Mature_409_residues
MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQSYDSDDVIGPAKPDFGFTQNF
VIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSNLSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYF
RPRVAQIPYRWVFATFDNEVGSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF
REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGALVTAEVPMSALSWSGSPMPTI
KVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELPEQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREA
NILFLRQLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45376; Mature: 45376

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQS
CCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
YDSDDVIGPAKPDFGFTQNFVIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSN
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEECCHHHHHHHHHCCCHHHHHHHHH
LSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYFRPRVAQIPYRWVFATFDNEV
HCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEEEEEECCCC
GSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGAL
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCE
VTAEVPMSALSWSGSPMPTIKVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELP
EEECCCHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCH
EQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREANILFLRQLP
HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCC
>Mature Secondary Structure
MLRKLPPLMGWSILTVSKPLQFTIFFCISLLTLAAKSDGQQSVPNRCYPGIACPDRAGQS
CCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
YDSDDVIGPAKPDFGFTQNFVIDGGQNLLWARNLYAVGDTTKLFKDAASGNQSVRDAYSN
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCEEEECCHHHHHHHHHCCCHHHHHHHHH
LSENAHGSTIGGLKGWRLATKSEVDTLLDSLDATTIYAYFRPRVAQIPYRWVFATFDNEV
HCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEEEEEECCCC
GSQSIPVDGVDYANTSLGRLPEGRQPGSPELNPYGVWLVKEMTSDVERAMKPIKEPLRQF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
REPIEERRVKPLATYSVSKTDDLLNLDESSRIVATVVTRRALNSRFYTRYSLRPLPRGAL
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCE
VTAEVPMSALSWSGSPMPTIKVAVRSGSNQSTSVEQLWEFGGSDTVGVWQPANRARLELP
EEECCCHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCH
EQVARNAYNVGDDLVLSFSADFNDCQFAAPELIIRYVREANILFLRQLP
HHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA