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The map label for this gene is 209551129

Identifier: 209551129

GI number: 209551129

Start: 3682753

End: 3683310

Strand: Reverse

Name: 209551129

Synonym: Rleg2_3553

Alternate gene names: NA

Gene position: 3683310-3682753 (Counterclockwise)

Preceding gene: 209551130

Following gene: 209551126

Centisome position: 81.17

GC content: 59.5

Gene sequence:

>558_bases
TTGACGATTGCAGTCTCCCCCCAGGCCCTGCCAGCGCTCGTTCTGAACGCTGACTACCGGCCACTGAGTTATTACCCCTT
GTCGCTGTGGTCCTGGCAGGACGCGATCAAGGCGGTATTTCTCGACCGTGTGAACATCATCGCAGAATACGAGCATTCGG
TTTCCTCGCCGAGTTTTTCGATGCGGCTTCCGAGTGTCGTATGCCTCAAGACCTATGTTCAGCCGTCCCGCAATCCCGCC
TTCACCCGGTTCAACGTCTTCCTGCGCGACCGGTTCGAATGCCAGTATTGCGGCGCTCATGACGATCTGACCTTCGATCA
CGTCATCCCGCGCGCGCATGGCGGCGAGACGACCTGGGAGAATGTCGTGGCCGCCTGTTCGCCCTGCAATCTGCGCAAGG
GCAGCAAGTTGCCGAAGCAGGCCAGCATGTTCCCGGCGCAGAAGCCCTATCAGCCGACGGTGCAGGATCTGCACAATAAC
GGCCGGCTGTTCCCGCCGAACTATCTGCACGACAGCTGGCTCGACTATCTCTACTGGGATACCGAACTTCAGCCCTGA

Upstream 100 bases:

>100_bases
CTTCAAATTGCCTTTATCCTCTGAATTTATTGGACTTCACAATCCTGTAACAACCGGCCTAATATACAGGTGCAGATGCC
GAATCGATCAGGAGAGTCCC

Downstream 100 bases:

>100_bases
TCAAACCGCCTTAGGCCGCCTTGCGAACGCCGACGAAAGCGAAGGCGGCAAGCAGGATTCCGGCAATCACGTTCCAGCCC
GCAAAAGACAGGCCGAGCAC

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIIAEYEHSVSSPSFSMRLPSVVCLKTYVQPSRNPA
FTRFNVFLRDRFECQYCGAHDDLTFDHVIPRAHGGETTWENVVAACSPCNLRKGSKLPKQASMFPAQKPYQPTVQDLHNN
GRLFPPNYLHDSWLDYLYWDTELQP

Sequences:

>Translated_185_residues
MTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIIAEYEHSVSSPSFSMRLPSVVCLKTYVQPSRNPA
FTRFNVFLRDRFECQYCGAHDDLTFDHVIPRAHGGETTWENVVAACSPCNLRKGSKLPKQASMFPAQKPYQPTVQDLHNN
GRLFPPNYLHDSWLDYLYWDTELQP
>Mature_184_residues
TIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIIAEYEHSVSSPSFSMRLPSVVCLKTYVQPSRNPAF
TRFNVFLRDRFECQYCGAHDDLTFDHVIPRAHGGETTWENVVAACSPCNLRKGSKLPKQASMFPAQKPYQPTVQDLHNNG
RLFPPNYLHDSWLDYLYWDTELQP

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21240; Mature: 21109

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIIAEYEHSVSSPSFS
CEEECCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
MRLPSVVCLKTYVQPSRNPAFTRFNVFLRDRFECQYCGAHDDLTFDHVIPRAHGGETTWE
EECCHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCHHHHCCCCCCCCCCHH
NVVAACSPCNLRKGSKLPKQASMFPAQKPYQPTVQDLHNNGRLFPPNYLHDSWLDYLYWD
HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHEEEC
TELQP
CCCCC
>Mature Secondary Structure 
TIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIIAEYEHSVSSPSFS
EEECCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
MRLPSVVCLKTYVQPSRNPAFTRFNVFLRDRFECQYCGAHDDLTFDHVIPRAHGGETTWE
EECCHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCHHHHCCCCCCCCCCHH
NVVAACSPCNLRKGSKLPKQASMFPAQKPYQPTVQDLHNNGRLFPPNYLHDSWLDYLYWD
HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHEEEC
TELQP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA