| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ubiG
Identifier: 209551103
GI number: 209551103
Start: 3658076
End: 3658834
Strand: Direct
Name: ubiG
Synonym: Rleg2_3527
Alternate gene names: 209551103
Gene position: 3658076-3658834 (Clockwise)
Preceding gene: 209551096
Following gene: 209551109
Centisome position: 80.61
GC content: 61.92
Gene sequence:
>759_bases ATGACGGAAGGCGCCAGAAGCACGATCGACCAGGGCGAAGTGGACCGCTTCTCGGCGATGGCGGCGGAATGGTGGAGCCC GACGGGCAAGTTCCGGCCGCTGCACAAATTCAATCCCGTCCGCCTGACCTATATAAGAGACAAGGCCTGCGAGAATTTCG GCCGTGATCCGAAAAGCGCGCGTCCGCTGGAAGGTCTGCGCGTGCTCGATATCGGCTGCGGCGGCGGCCTTTTGTCCGAA CCCGTCGCCCGCATGGGCGCCACCGTCACTGGCGCCGATCCCTCCGAAAAGAATATCGGCATCGCCTCGACGCATGCCAA GGCCTCCGGCGTTTCGGTCGACTACCGCGCCGTCACCGCCGAGGAACTGGCGGACGCCGGCGAAACCTTCGACATCGTCC TGAACATGGAAGTGGTCGAACACGTCGCCGACGTCGAGTTCTTCATGACGACCTGCGCAAAAATGGTCCGCCCCGGCGGC CTGATCTTCGTTGCCACCATCAACCGCACGATGAAAGCAGCGGCCCTTGCCATCTTCGCCGCCGAAAACATCCTGCGCTG GCTGCCGCGCGGCACCCACCAATATGAGAAACTGGTGCGCCCGGAAGAGCTGGAAAAGCCATTGACGGCAAGCGGCCTCG AGATCACCGACCGCACCGGCGTCTTCTTCAATCCGCTGTCGAACCAGTGGAACCTGTCCAAGGATATGGACGTGAATTAT ATGCTGCTGGCCAAGCGGTCTGCACAGCTCGACCGATAA
Upstream 100 bases:
>100_bases TTGGCGAGCGGCTCCACGCTCACCGGTCCTCTGCTCCGCGCCCCTTGACTTATGCCCGCGATCGTCCGACTTCACGTGTC ACGAACGCAAGGAGTGGACG
Downstream 100 bases:
>100_bases TAAGCCGGCTACACTTTCAGGGTTTGAACGTGTGCAAGCAGATCCCTTTGGGTTTCTGCGTTGCGAACGGCAAGTTCCTT CACCCGGTCGCGATCGATTG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARPLEGLRVLDIGCGGGLLSE PVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAEELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGG LIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY MLLAKRSAQLDR
Sequences:
>Translated_252_residues MTEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARPLEGLRVLDIGCGGGLLSE PVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAEELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGG LIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY MLLAKRSAQLDR >Mature_251_residues TEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARPLEGLRVLDIGCGGGLLSEP VARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAEELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGL IFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNYM LLAKRSAQLDR
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=247, Percent_Identity=40.8906882591093, Blast_Score=216, Evalue=1e-56, Organism=Escherichia coli, GI1788564, Length=237, Percent_Identity=42.1940928270042, Blast_Score=199, Evalue=1e-52, Organism=Caenorhabditis elegans, GI115533050, Length=249, Percent_Identity=34.9397590361446, Blast_Score=153, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6324476, Length=230, Percent_Identity=30, Blast_Score=110, Evalue=2e-25, Organism=Drosophila melanogaster, GI281365311, Length=247, Percent_Identity=32.7935222672065, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24585589, Length=268, Percent_Identity=31.3432835820896, Blast_Score=137, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_RHILW (B5ZRR7)
Other databases:
- EMBL: CP001191 - RefSeq: YP_002283020.1 - ProteinModelPortal: B5ZRR7 - GeneID: 6982287 - GenomeReviews: CP001191_GR - KEGG: rlt:Rleg2_3527 - HOGENOM: HBG738842 - OMA: KFITPDE - ProtClustDB: PRK05134 - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 27750; Mature: 27619
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCC RPLEGLRVLDIGCGGGLLSEPVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTA CCCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCEEEHHEHHH EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA HHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY HHHHHHHCCCCHHHHHHCCCHHHHCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCE MLLAKRSAQLDR EEEEECHHCCCC >Mature Secondary Structure TEGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCC RPLEGLRVLDIGCGGGLLSEPVARMGATVTGADPSEKNIGIASTHAKASGVSVDYRAVTA CCCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCCCEEECCCCCCCCEEEHHEHHH EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA HHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY HHHHHHHCCCCHHHHHHCCCHHHHCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCE MLLAKRSAQLDR EEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA