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The map label for this gene is nrdF [H]

Identifier: 209551073

GI number: 209551073

Start: 3614240

End: 3615214

Strand: Reverse

Name: nrdF [H]

Synonym: Rleg2_3497

Alternate gene names: 209551073

Gene position: 3615214-3614240 (Counterclockwise)

Preceding gene: 209551074

Following gene: 209551072

Centisome position: 79.67

GC content: 58.77

Gene sequence:

>975_bases
ATGAACATGCAGATCAAACCGGTGTCCCGCGTGCGTGCCATCAACTGGAACCGCATCGAGGACGACAAGGATCTCGAAGT
CTGGAATCGGCTGACCGGCAATTTCTGGCTGCCGGAGAAAGTGCCGCTGTCCAACGACATTCCCTCCTGGGCGACGCTGA
CGGCGGCCGAGCAGCAGCTGACGATCCGGGTCTTCACCGGGCTGACGCTGCTCGACACGATCCAGAACGGCGTCGGCGCC
GTCGGGTTGATGGAGGATGCGGTCACCCCGCATGAGGAGGCAGTGCTTTCCAACGTCTCCTTCATGGAGGCGGTGCATGC
GCGCTCCTACTCCTCGATCTTTTCGACGCTCTGCTCGACGCCCGACGTCGACGATGCCTATCGCTGGTCCGAGGAGAACG
AATTCCTGCAGCGCAAGTCGACGCTGATCATCGAGCAGTATCGCTGCGGCGATCCCTTGAAGAAGAAGGTCGCCAGCGTC
TTCCTCGAAAGCTTCCTGTTCTATTCCGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTCACCAACACGGC
AGACATGATCCGGCTGATCATCCGCGACGAGGCGGTGCACGGCTATTATATCGGCTATAAATTCCAGCGCGGACTGGAGC
GGCTTTCCGAGGAGAGAAAGCAGGAGATCAAGGATTTCGCCTTCGACCTGCTGCTCGAACTCTACGACAATGAGGCGAGA
TATACCGAAGCGCTCTATGACGGCGTCGGGCTTACCGAGGACGTCAAGAAATTCCTGCATTACAATGCCAACAAGGCGCT
GATGAACCTCGGCTACGAGGCGCTTTTCCCGGCCGAGGCTTGCAAGGTCAATCCGGCGATCCTGTCGGCGCTTTCGCCGA
ATGCCGACGAGAACCACGATTTCTTCTCGGGCTCCGGTTCCTCTTATGTGATCGGCAAGGCTGTCGCGACAGAAGATGAG
GACTGGGATTTCTGA

Upstream 100 bases:

>100_bases
ATCAAGACGATCTACTACATCCGCCTTCGCCAGATGGCGCTGTCCGGCACCGAGGTGCAGGGCTGCGTGTCTTGCACGCT
GTAACCGATCGGGGAACATC

Downstream 100 bases:

>100_bases
GGCTTTATCGCAGTCGGCCCTTATCATTTGCATCCCCATCGCCCACATTCAGCGGAAATCAAGTCGATCCTCGCCGATTG
TGGCGCAGCGGAGTTTTTAA

Product: ribonucleotide-diphosphate reductase subunit beta

Products: NA

Alternate protein names: Ribonucleotide reductase small subunit [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNMQIKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNGVGA
VGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDDAYRWSEENEFLQRKSTLIIEQYRCGDPLKKKVASV
FLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEAR
YTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYVIGKAVATEDE
DWDF

Sequences:

>Translated_324_residues
MNMQIKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNGVGA
VGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDDAYRWSEENEFLQRKSTLIIEQYRCGDPLKKKVASV
FLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEAR
YTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYVIGKAVATEDE
DWDF
>Mature_324_residues
MNMQIKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNGVGA
VGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDDAYRWSEENEFLQRKSTLIIEQYRCGDPLKKKVASV
FLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEAR
YTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHDFFSGSGSSYVIGKAVATEDE
DWDF

Specific function: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [H]

COG id: COG0208

COG function: function code F; Ribonucleotide reductase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonucleoside diphosphate reductase small chain family [H]

Homologues:

Organism=Escherichia coli, GI1789031, Length=317, Percent_Identity=77.2870662460568, Blast_Score=516, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009078
- InterPro:   IPR012348
- InterPro:   IPR000358 [H]

Pfam domain/function: PF00268 Ribonuc_red_sm [H]

EC number: =1.17.4.1 [H]

Molecular weight: Translated: 36966; Mature: 36966

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00368 RIBORED_SMALL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMQIKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQL
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHE
TIRVFTGLTLLDTIQNGVGAVGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCST
EEEHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDVDDAYRWSEENEFLQRKSTLIIEQYRCGDPLKKKVASVFLESFLFYSGFYLPMYWSSR
CCCCHHHCCCCHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEAR
CCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHD
HHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCHHHHCCHHHHCCCHHHHHHCCCCCCCCCC
FFSGSGSSYVIGKAVATEDEDWDF
CCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MNMQIKPVSRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWATLTAAEQQL
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHE
TIRVFTGLTLLDTIQNGVGAVGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCST
EEEHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDVDDAYRWSEENEFLQRKSTLIIEQYRCGDPLKKKVASVFLESFLFYSGFYLPMYWSSR
CCCCHHHCCCCHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
AKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEAR
CCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENHD
HHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCHHHHCCHHHHCCCHHHHHHCCCCCCCCCC
FFSGSGSSYVIGKAVATEDEDWDF
CCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]