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The map label for this gene is ycjP [C]

Identifier: 209551024

GI number: 209551024

Start: 3563545

End: 3564375

Strand: Reverse

Name: ycjP [C]

Synonym: Rleg2_3448

Alternate gene names: 209551024

Gene position: 3564375-3563545 (Counterclockwise)

Preceding gene: 209551025

Following gene: 209551023

Centisome position: 78.55

GC content: 60.17

Gene sequence:

>831_bases
ATGGCCAGAAAAGTCACAACCCGGCGCAAGGTCATCGTCACCGCGATCGCCTGGACGCTCGGCATCCTGATCTTCTTCCC
GATCCTCTGGACCTTCCTGACCAGCTTCAAGTCGGAAGCCGACGCCATCGCCTCACCGCCGCAGTTCCTGTTCTTCCACT
GGACGACGGAGAACTACGCGGAGGTGCAGAGCCGGTCGAACTACCTCAGCCACTTCATGAACTCGGTGATCATTTCCTTC
GGCTCGACACTGATCGGCCTGATCATCGCCATTCCGGCCGCCTGGGCGATGGCGTTTTCGCCGACCAAGCGGACCAAGGA
CGTGCTGATGTGGATGCTCTCGACCAAGATGATGCCGCCTGTGGGCGCATTGATCCCGATCTATCTGCTGTTCCGCAATT
CCGGCCTGCTCGACACGCGCACCGGTCTGGTGATCGTGCTGACGCTGATCAACCTGCCGATCATCGTCTGGATGCTCTAC
ACCTACTTCAAGGAAATTCCCGGTGAGATCCTCGAAGCGGCCCGCATGGACGGCGCATCGCTGATGAAGGAGATCGTCTA
CGTGCTGACGCCGATGGCGGTGCCCGGCATCGCCTCGACGCTGCTTCTGAACATCATCCTTGCCTGGAACGAGGCGTTCT
GGACCCTCAACCTCACCGCCTCCAAGGCGGCGCCGCTGACGGCCTTCATCGCTTCCTATTCCAGTCCGGAAGGCCTGTTC
TACGCCAAACTCTCGGCGGCATCGACGATGGCGATCGCGCCGATCCTGATCCTTGGCTGGTTCAGCCAGAAACAACTTGT
CCGCGGCCTGACCTTCGGCGCTGTGAAATAA

Upstream 100 bases:

>100_bases
ATCGGCGGCGCTTCGGCGGGCGGTATCGTCGCCGTCGTGCTTGCCAATATCGTCGCGATCTTCCTCGTCCGCCTCGTCGG
CAAGAATCTGGAGGCTTGAG

Downstream 100 bases:

>100_bases
GATAAAGGGAGACAAACATGGGCAGCATTACCCTTCAGAAGGTTTCCAAGGTCTTCGGCGAAGCCAAGGTCATCCCTTCG
ATTGATCTCGACATCAAGGA

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MARKVTTRRKVIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYAEVQSRSNYLSHFMNSVIISF
GSTLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPPVGALIPIYLLFRNSGLLDTRTGLVIVLTLINLPIIVWMLY
TYFKEIPGEILEAARMDGASLMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLF
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Sequences:

>Translated_276_residues
MARKVTTRRKVIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYAEVQSRSNYLSHFMNSVIISF
GSTLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPPVGALIPIYLLFRNSGLLDTRTGLVIVLTLINLPIIVWMLY
TYFKEIPGEILEAARMDGASLMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLF
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
>Mature_275_residues
ARKVTTRRKVIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYAEVQSRSNYLSHFMNSVIISFG
STLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPPVGALIPIYLLFRNSGLLDTRTGLVIVLTLINLPIIVWMLYT
YFKEIPGEILEAARMDGASLMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLFY
AKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=278, Percent_Identity=27.6978417266187, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790464, Length=274, Percent_Identity=30.6569343065693, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30627; Mature: 30496

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKVTTRRKVIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
EVQSRSNYLSHFMNSVIISFGSTLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
VGALIPIYLLFRNSGLLDTRTGLVIVLTLINLPIIVWMLYTYFKEIPGEILEAARMDGAS
HHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
LMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCCEE
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARKVTTRRKVIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
EVQSRSNYLSHFMNSVIISFGSTLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
VGALIPIYLLFRNSGLLDTRTGLVIVLTLINLPIIVWMLYTYFKEIPGEILEAARMDGAS
HHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
LMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLF
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCCEE
YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK
EEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]