Click here to switch to the map view.

The map label for this gene is araB [H]

Identifier: 209551020

GI number: 209551020

Start: 3558595

End: 3560178

Strand: Reverse

Name: araB [H]

Synonym: Rleg2_3444

Alternate gene names: 209551020

Gene position: 3560178-3558595 (Counterclockwise)

Preceding gene: 209551021

Following gene: 209551018

Centisome position: 78.45

GC content: 64.71

Gene sequence:

>1584_bases
ATGCGGGATCATGTGGTTGCGGTGGATGTCGGCACCGGCAGTGCGCGCGCCGGCGTCTTCGATGCCCGTGGCCGCCTGCT
CGCCAAGGCCGAACATCCGATCGTGATGAACCGGCCGCGCGAAAACCATGCCGAGCACGATTCCGAAGACATCTGGTCCG
CTGCCTGCACGGCGGTGCGGAGCGCCATGGCGCAATCCGGCATCGCTGCAGCCGCGGTCGGCGCGATCGGCTTCGACGCC
ACCTGTTCGCTTGTCGTCCGCGATGCCGAGGGCCGGCAGCTCAGCGTTTCCACCGGCGGCGAGAAGCGGTTCGACACGAT
CGTCTGGCTCGATCACCGGGCGCTGAAGGAAGCGGATTTCTGCACGGCGACGGAGCACGCTGTGCTTGAACATTCCGGGC
ATGTCATGTCGCCCGAAATGGAGATGCCGAAGCTGATGTGGCTGAAGAAGAAGCTGCCCTCCACATGGGAAAAGGCCGGC
TACTTCTTCGATCTCGCCGATTTCATGACGTGGAAATCGACCGGATCGGCTGCCCGGTCGCGCTGCACGCTGACGGCGAA
ATGGAACTATCTCGCTCATCTCGAAAAGGGCTGGCAGCAGGATTTCCTGGAGCGGATCGGTCTCGAGGACCTTCAGGCGC
GCGGCCAGCTGCCGGATGAGACAGTGCCGGTCGGCGGCAGCGTCGGCCGGCTGACGCCTGGTGCGGCAGAGGCGCTGGGG
CTGACCGCGGATTGCCATGTCTCGGCCGGGATGATCGACGCCTATGCCGGCGCGCTCGGTGCACTCGGCCAATATGCCGC
CGATCCTGCAAAGCGCGAGCACCAGCTGGCGCTGATTGCCGGCACGTCGAGCTGTATTGTCACCTTCTCCAGGGAACGCA
AGCCGAGCCATGGCATGTGGGGCCCCTATTACGAGGCGGTCTTTCCACAATCTTGGCTGGTGGAGGCCGGGCAATCGGCG
ACCGGTGCGCTGCTCGACCACATCGTGCGTATGCATGCCGCCGGCGGCGAGCCGACGGCGGCGCTACATCAGAGGATCGT
CGCACGCATTGCCGAATTGCGCGCCGAGGAAGGTGATGCCTTCGGGGCGCGCATTTTCGTGCTGCCGGATTTCCACGGCA
ATCGCTCGCCGCTTGCCGATCCGCATGCTGTCGGCGTCGTCAGCGGCCTGAGCCTCGATACGTCCTTCGATGGCCTCTGC
ACGCTTTACTGGCGCACCGCTGTCGCGATCGCGCTCGGGATCCGCCATATCCTCGAAATGATGAAGGAATACGGTTACGT
GCCCGATACGCTGCATATTGCCGGCGGGCATGTGAAGAACCCGGTGCTGATGGAGCTCTACAGCGATGCCACCGGCTGCA
AGGTCGTGGTGCCGAAGATGAACGAGGCGGTGCTGCTCGGCACGGCGATCGCCGCATCCGTCGCCTGCGGCTTGCACGGG
GATTTGGCGGCGGCGGGCGAGGCGATGTATCCGGGCGGCGACGTACGGTTTCCCGACAAGGCAAAACAGGCGCTCTACGA
TCGCGACTACCGCCGCCTTCTTGCCATGCACCGGCATCGCGCCGAGCTGGAAACGATGCAATAA

Upstream 100 bases:

>100_bases
GCGCCGAACTCGACCGGCTTTCGCCTGATGTGGTGTTTGACGCCATGCCTGAATTGATACACCTTGTCCGCAACCATAAG
CTGGACGGGATCAAGATTTG

Downstream 100 bases:

>100_bases
CGGTTCAGTGGTTGGCCGTCTCGCCAAGGACGGTCGCAAATTCCAGCATGCGGCGGCGGCGAAGGGCCGCCTCTTCCCCG
ACTTCGAGGACCACGGATTC

Product: FGGY-family pentulose kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRDHVVAVDVGTGSARAGVFDARGRLLAKAEHPIVMNRPRENHAEHDSEDIWSAACTAVRSAMAQSGIAAAAVGAIGFDA
TCSLVVRDAEGRQLSVSTGGEKRFDTIVWLDHRALKEADFCTATEHAVLEHSGHVMSPEMEMPKLMWLKKKLPSTWEKAG
YFFDLADFMTWKSTGSAARSRCTLTAKWNYLAHLEKGWQQDFLERIGLEDLQARGQLPDETVPVGGSVGRLTPGAAEALG
LTADCHVSAGMIDAYAGALGALGQYAADPAKREHQLALIAGTSSCIVTFSRERKPSHGMWGPYYEAVFPQSWLVEAGQSA
TGALLDHIVRMHAAGGEPTAALHQRIVARIAELRAEEGDAFGARIFVLPDFHGNRSPLADPHAVGVVSGLSLDTSFDGLC
TLYWRTAVAIALGIRHILEMMKEYGYVPDTLHIAGGHVKNPVLMELYSDATGCKVVVPKMNEAVLLGTAIAASVACGLHG
DLAAAGEAMYPGGDVRFPDKAKQALYDRDYRRLLAMHRHRAELETMQ

Sequences:

>Translated_527_residues
MRDHVVAVDVGTGSARAGVFDARGRLLAKAEHPIVMNRPRENHAEHDSEDIWSAACTAVRSAMAQSGIAAAAVGAIGFDA
TCSLVVRDAEGRQLSVSTGGEKRFDTIVWLDHRALKEADFCTATEHAVLEHSGHVMSPEMEMPKLMWLKKKLPSTWEKAG
YFFDLADFMTWKSTGSAARSRCTLTAKWNYLAHLEKGWQQDFLERIGLEDLQARGQLPDETVPVGGSVGRLTPGAAEALG
LTADCHVSAGMIDAYAGALGALGQYAADPAKREHQLALIAGTSSCIVTFSRERKPSHGMWGPYYEAVFPQSWLVEAGQSA
TGALLDHIVRMHAAGGEPTAALHQRIVARIAELRAEEGDAFGARIFVLPDFHGNRSPLADPHAVGVVSGLSLDTSFDGLC
TLYWRTAVAIALGIRHILEMMKEYGYVPDTLHIAGGHVKNPVLMELYSDATGCKVVVPKMNEAVLLGTAIAASVACGLHG
DLAAAGEAMYPGGDVRFPDKAKQALYDRDYRRLLAMHRHRAELETMQ
>Mature_527_residues
MRDHVVAVDVGTGSARAGVFDARGRLLAKAEHPIVMNRPRENHAEHDSEDIWSAACTAVRSAMAQSGIAAAAVGAIGFDA
TCSLVVRDAEGRQLSVSTGGEKRFDTIVWLDHRALKEADFCTATEHAVLEHSGHVMSPEMEMPKLMWLKKKLPSTWEKAG
YFFDLADFMTWKSTGSAARSRCTLTAKWNYLAHLEKGWQQDFLERIGLEDLQARGQLPDETVPVGGSVGRLTPGAAEALG
LTADCHVSAGMIDAYAGALGALGQYAADPAKREHQLALIAGTSSCIVTFSRERKPSHGMWGPYYEAVFPQSWLVEAGQSA
TGALLDHIVRMHAAGGEPTAALHQRIVARIAELRAEEGDAFGARIFVLPDFHGNRSPLADPHAVGVVSGLSLDTSFDGLC
TLYWRTAVAIALGIRHILEMMKEYGYVPDTLHIAGGHVKNPVLMELYSDATGCKVVVPKMNEAVLLGTAIAASVACGLHG
DLAAAGEAMYPGGDVRFPDKAKQALYDRDYRRLLAMHRHRAELETMQ

Specific function: L-lyxose utilization. [C]

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=537, Percent_Identity=41.8994413407821, Blast_Score=392, Evalue=1e-109,
Organism=Homo sapiens, GI164663830, Length=561, Percent_Identity=40.1069518716578, Blast_Score=379, Evalue=1e-105,
Organism=Escherichia coli, GI1790005, Length=531, Percent_Identity=22.7871939736347, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786249, Length=555, Percent_Identity=25.4054054054054, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787789, Length=537, Percent_Identity=24.2085661080074, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789987, Length=472, Percent_Identity=22.0338983050847, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320314, Length=512, Percent_Identity=35.15625, Blast_Score=296, Evalue=5e-81,
Organism=Saccharomyces cerevisiae, GI6324080, Length=491, Percent_Identity=25.2545824847251, Blast_Score=117, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24657106, Length=534, Percent_Identity=36.8913857677903, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI24657102, Length=534, Percent_Identity=36.8913857677903, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI21356323, Length=424, Percent_Identity=36.3207547169811, Blast_Score=251, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 56917; Mature: 56917

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHVVAVDVGTGSARAGVFDARGRLLAKAEHPIVMNRPRENHAEHDSEDIWSAACTAVR
CCCCEEEEEECCCCCCCCEECCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
SAMAQSGIAAAAVGAIGFDATCSLVVRDAEGRQLSVSTGGEKRFDTIVWLDHRALKEADF
HHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEECCHHHHCCCC
CTATEHAVLEHSGHVMSPEMEMPKLMWLKKKLPSTWEKAGYFFDLADFMTWKSTGSAARS
CCHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCHHHHCCCEEEHHHHHHHCCCCHHHHC
RCTLTAKWNYLAHLEKGWQQDFLERIGLEDLQARGQLPDETVPVGGSVGRLTPGAAEALG
EEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHC
LTADCHVSAGMIDAYAGALGALGQYAADPAKREHQLALIAGTSSCIVTFSRERKPSHGMW
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCC
GPYYEAVFPQSWLVEAGQSATGALLDHIVRMHAAGGEPTAALHQRIVARIAELRAEEGDA
CCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
FGARIFVLPDFHGNRSPLADPHAVGVVSGLSLDTSFDGLCTLYWRTAVAIALGIRHILEM
CCEEEEEEECCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MKEYGYVPDTLHIAGGHVKNPVLMELYSDATGCKVVVPKMNEAVLLGTAIAASVACGLHG
HHHCCCCCCEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHCCCC
DLAAAGEAMYPGGDVRFPDKAKQALYDRDYRRLLAMHRHRAELETMQ
CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDHVVAVDVGTGSARAGVFDARGRLLAKAEHPIVMNRPRENHAEHDSEDIWSAACTAVR
CCCCEEEEEECCCCCCCCEECCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
SAMAQSGIAAAAVGAIGFDATCSLVVRDAEGRQLSVSTGGEKRFDTIVWLDHRALKEADF
HHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEECCHHHHCCCC
CTATEHAVLEHSGHVMSPEMEMPKLMWLKKKLPSTWEKAGYFFDLADFMTWKSTGSAARS
CCHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCHHHHCCCEEEHHHHHHHCCCCHHHHC
RCTLTAKWNYLAHLEKGWQQDFLERIGLEDLQARGQLPDETVPVGGSVGRLTPGAAEALG
EEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHC
LTADCHVSAGMIDAYAGALGALGQYAADPAKREHQLALIAGTSSCIVTFSRERKPSHGMW
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCC
GPYYEAVFPQSWLVEAGQSATGALLDHIVRMHAAGGEPTAALHQRIVARIAELRAEEGDA
CCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
FGARIFVLPDFHGNRSPLADPHAVGVVSGLSLDTSFDGLCTLYWRTAVAIALGIRHILEM
CCEEEEEEECCCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MKEYGYVPDTLHIAGGHVKNPVLMELYSDATGCKVVVPKMNEAVLLGTAIAASVACGLHG
HHHCCCCCCEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHCCCC
DLAAAGEAMYPGGDVRFPDKAKQALYDRDYRRLLAMHRHRAELETMQ
CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA