| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yieH [H]
Identifier: 209551021
GI number: 209551021
Start: 3560178
End: 3560867
Strand: Reverse
Name: yieH [H]
Synonym: Rleg2_3445
Alternate gene names: 209551021
Gene position: 3560867-3560178 (Counterclockwise)
Preceding gene: 209551022
Following gene: 209551020
Centisome position: 78.47
GC content: 61.45
Gene sequence:
>690_bases ATGGCTGATGCTGAACCGCAGCTGATCATCTTCGATTGCGACGGCGTGCTCGTCGACAGCGAGCCGATCTCGATCAGCGT GCTGGTCGCCGCGATGAACGATCTCGGCGTCTCGATCACCGAGGACCAAGCCTATGAGCGCTTTCTCGGCCGCAGCCTGT CGACGATGGTCGACACGCTGGACACCGAATTCAACGTTCATGCCGGCGAGGAATTTCTCGAGCGCATCCGCACCGATCTC TACGCCCGTTTTCGCACCGAATTGAAGCCGATCGACGGTATCGCCGCAGCGATCGATGGGCTCGGCGTTCGCTGCTGCGT CGCCTCCTCAAGCCAGATGGAGCGGATCCGGCTGTCGCTGTCCGTCACCGGGCTGCTCGGCAGGCTGCCCGACATCTTCA GTGCGACGATGGTCAAGCGCGGCAAACCGGCGCCCGATCTTTTCCTGCATGCAGCGCGTGAAATGCAGGTAGAGCCTGCG CACTGCATTGTCGTCGAGGACAGCCCGGCCGGCATTGCCGCCGCCAAGGCGGCGGGTATGACGGTGTTTGCCTTCACCGG CGGATCGCATGCCAACTTCGCCGGTTATCGCGCCGAACTCGACCGGCTTTCGCCTGATGTGGTGTTTGACGCCATGCCTG AATTGATACACCTTGTCCGCAACCATAAGCTGGACGGGATCAAGATTTGA
Upstream 100 bases:
>100_bases TAGTGAATCCGGATGGCGGCATTCATTGCCGCCGTCCATCCGGCCTTGCGAGGAAGCGGGACGGTCGTGCGTCCGAAATT GAACTCAGGTTGGGTCCTCC
Downstream 100 bases:
>100_bases TGCGGGATCATGTGGTTGCGGTGGATGTCGGCACCGGCAGTGCGCGCGCCGGCGTCTTCGATGCCCGTGGCCGCCTGCTC GCCAAGGCCGAACATCCGAT
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MADAEPQLIIFDCDGVLVDSEPISISVLVAAMNDLGVSITEDQAYERFLGRSLSTMVDTLDTEFNVHAGEEFLERIRTDL YARFRTELKPIDGIAAAIDGLGVRCCVASSSQMERIRLSLSVTGLLGRLPDIFSATMVKRGKPAPDLFLHAAREMQVEPA HCIVVEDSPAGIAAAKAAGMTVFAFTGGSHANFAGYRAELDRLSPDVVFDAMPELIHLVRNHKLDGIKI
Sequences:
>Translated_229_residues MADAEPQLIIFDCDGVLVDSEPISISVLVAAMNDLGVSITEDQAYERFLGRSLSTMVDTLDTEFNVHAGEEFLERIRTDL YARFRTELKPIDGIAAAIDGLGVRCCVASSSQMERIRLSLSVTGLLGRLPDIFSATMVKRGKPAPDLFLHAAREMQVEPA HCIVVEDSPAGIAAAKAAGMTVFAFTGGSHANFAGYRAELDRLSPDVVFDAMPELIHLVRNHKLDGIKI >Mature_228_residues ADAEPQLIIFDCDGVLVDSEPISISVLVAAMNDLGVSITEDQAYERFLGRSLSTMVDTLDTEFNVHAGEEFLERIRTDLY ARFRTELKPIDGIAAAIDGLGVRCCVASSSQMERIRLSLSVTGLLGRLPDIFSATMVKRGKPAPDLFLHAAREMQVEPAH CIVVEDSPAGIAAAKAAGMTVFAFTGGSHANFAGYRAELDRLSPDVVFDAMPELIHLVRNHKLDGIKI
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=186, Percent_Identity=32.7956989247312, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1788021, Length=188, Percent_Identity=28.1914893617021, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789046, Length=178, Percent_Identity=29.7752808988764, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24819; Mature: 24688
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAEPQLIIFDCDGVLVDSEPISISVLVAAMNDLGVSITEDQAYERFLGRSLSTMVDTL CCCCCCCEEEEECCCEEECCCCCEEEEEEEEHHHCCCEEEHHHHHHHHHCCHHHHHHHHH DTEFNVHAGEEFLERIRTDLYARFRTELKPIDGIAAAIDGLGVRCCVASSSQMERIRLSL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCHHHHHEEEEE SVTGLLGRLPDIFSATMVKRGKPAPDLFLHAAREMQVEPAHCIVVEDSPAGIAAAKAAGM EHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCE TVFAFTGGSHANFAGYRAELDRLSPDVVFDAMPELIHLVRNHKLDGIKI EEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADAEPQLIIFDCDGVLVDSEPISISVLVAAMNDLGVSITEDQAYERFLGRSLSTMVDTL CCCCCCEEEEECCCEEECCCCCEEEEEEEEHHHCCCEEEHHHHHHHHHCCHHHHHHHHH DTEFNVHAGEEFLERIRTDLYARFRTELKPIDGIAAAIDGLGVRCCVASSSQMERIRLSL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCHHHHHEEEEE SVTGLLGRLPDIFSATMVKRGKPAPDLFLHAAREMQVEPAHCIVVEDSPAGIAAAKAAGM EHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCE TVFAFTGGSHANFAGYRAELDRLSPDVVFDAMPELIHLVRNHKLDGIKI EEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]