| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is tal [H]
Identifier: 209551013
GI number: 209551013
Start: 3552003
End: 3552968
Strand: Reverse
Name: tal [H]
Synonym: Rleg2_3437
Alternate gene names: 209551013
Gene position: 3552968-3552003 (Counterclockwise)
Preceding gene: 209551015
Following gene: 209551012
Centisome position: 78.29
GC content: 61.39
Gene sequence:
>966_bases ATGACATCCAAGCTTGACCAACTCCGCGAGATTACCACCGTCGTCGCCGACACCGGCGATATCGAAGCCGTCGCCCGCCT GAAGCCTGTGGATTGCACGACGAACCCGAGCATCGTGCTGAAGGCCCTCGGCACGCCGATGTTTGCCGACGCCATCAAGG AAGCCGTTGCCTGGGGCAAGAAGCAGGGCGGCAATCCTGACGCCGTTTCGTCGGCCGTTGCCGACCGTCTCGCCATCTCC GTCGGCGCAGCCCTGGTGAAGCTCGTTCCGGGCCGTGTCTCGACCGAAGTCGACGCCGATCTTTCCTTCGATACGGAGGC TTCGCTTGCCAAGGCGCGGTCGATCATCGCCGCCTATAAGGATCGCGGCATCGATCAGGACCGCATCCTCATCAAGCTCG CTTCCACCTGGGAAGGCATCCGCGCTGCGGAAGTGCTGCAGAAGGAAGGCATCGACTGCAATCTGACACTGCTCTTCAGC AAGGCCCAGGCAATCGCCTGCGCGGACGCCAAGGTGTTCCTGATCTCGCCCTTCGTCGGCCGCATCCTCGACTGGTACAA GAAATCGACCGGCAAGGACTACACCGCCGAGGAAGATCCGGGCGTCATCTCCGTCCGTGAAATCTACAACTACTACAAGG CGAACGATATCAAGACGATCGTCATGGGCGCCTCCTTCCGCAGCGCCGGCGAAATTGAAGCGCTTGCCGGCTGCGACCGC CTGACCATCAGCCCGAACCTGCTCGACGAACTCGCCAAGGATGAAGGCAAGCTGGAGCGCAAGCTTTCGCCGGAAGGCCG CAAGCCGGATCCGAAGGTGTCTGTCGACGAGAAGACCTTCCGCTGGATGATGAACGAAGATGCGATGGCGACGGAAAAAC TCGCCGAAGGCATCCGCGCTTTCGCCAAGGATTTGGGAACGTTGCGCACCATGGTGCAGAAGGAACTGCAGCTCGCCGCC GCCTGA
Upstream 100 bases:
>100_bases GCATTCTCGCCTGCAGCATGCAGACAATCTGTCGGTAGATCACCTTTGCCGGGCGGAACTCGCGCCGGTCGCAGCCCAAG TTCAACAAGGATTATTGACC
Downstream 100 bases:
>100_bases TAGGGCGCGGCATGCAATCGAAGGCGCGGCTGCCGGCTGGCAGGCGCGCCTTTTTCGTGCTGTTATCAAAGACATATGCT GTCGGAGACTGGTATGGCGG
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTSKLDQLREITTVVADTGDIEAVARLKPVDCTTNPSIVLKALGTPMFADAIKEAVAWGKKQGGNPDAVSSAVADRLAIS VGAALVKLVPGRVSTEVDADLSFDTEASLAKARSIIAAYKDRGIDQDRILIKLASTWEGIRAAEVLQKEGIDCNLTLLFS KAQAIACADAKVFLISPFVGRILDWYKKSTGKDYTAEEDPGVISVREIYNYYKANDIKTIVMGASFRSAGEIEALAGCDR LTISPNLLDELAKDEGKLERKLSPEGRKPDPKVSVDEKTFRWMMNEDAMATEKLAEGIRAFAKDLGTLRTMVQKELQLAA A
Sequences:
>Translated_321_residues MTSKLDQLREITTVVADTGDIEAVARLKPVDCTTNPSIVLKALGTPMFADAIKEAVAWGKKQGGNPDAVSSAVADRLAIS VGAALVKLVPGRVSTEVDADLSFDTEASLAKARSIIAAYKDRGIDQDRILIKLASTWEGIRAAEVLQKEGIDCNLTLLFS KAQAIACADAKVFLISPFVGRILDWYKKSTGKDYTAEEDPGVISVREIYNYYKANDIKTIVMGASFRSAGEIEALAGCDR LTISPNLLDELAKDEGKLERKLSPEGRKPDPKVSVDEKTFRWMMNEDAMATEKLAEGIRAFAKDLGTLRTMVQKELQLAA A >Mature_320_residues TSKLDQLREITTVVADTGDIEAVARLKPVDCTTNPSIVLKALGTPMFADAIKEAVAWGKKQGGNPDAVSSAVADRLAISV GAALVKLVPGRVSTEVDADLSFDTEASLAKARSIIAAYKDRGIDQDRILIKLASTWEGIRAAEVLQKEGIDCNLTLLFSK AQAIACADAKVFLISPFVGRILDWYKKSTGKDYTAEEDPGVISVREIYNYYKANDIKTIVMGASFRSAGEIEALAGCDRL TISPNLLDELAKDEGKLERKLSPEGRKPDPKVSVDEKTFRWMMNEDAMATEKLAEGIRAFAKDLGTLRTMVQKELQLAAA
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=321, Percent_Identity=56.0747663551402, Blast_Score=348, Evalue=3e-96, Organism=Escherichia coli, GI1786189, Length=313, Percent_Identity=59.7444089456869, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1788807, Length=315, Percent_Identity=56.1904761904762, Blast_Score=355, Evalue=3e-99, Organism=Caenorhabditis elegans, GI25153750, Length=323, Percent_Identity=54.1795665634675, Blast_Score=337, Evalue=5e-93, Organism=Caenorhabditis elegans, GI25153752, Length=170, Percent_Identity=56.4705882352941, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=54.639175257732, Blast_Score=98, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=55.7632398753894, Blast_Score=324, Evalue=1e-89, Organism=Saccharomyces cerevisiae, GI6321480, Length=321, Percent_Identity=51.0903426791277, Blast_Score=321, Evalue=1e-88, Organism=Drosophila melanogaster, GI45549185, Length=320, Percent_Identity=55.625, Blast_Score=339, Evalue=2e-93,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 34801; Mature: 34670
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKLDQLREITTVVADTGDIEAVARLKPVDCTTNPSIVLKALGTPMFADAIKEAVAWGK CCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH KQGGNPDAVSSAVADRLAISVGAALVKLVPGRVSTEVDADLSFDTEASLAKARSIIAAYK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DRGIDQDRILIKLASTWEGIRAAEVLQKEGIDCNLTLLFSKAQAIACADAKVFLISPFVG HCCCCCHHEEEEEHHHHCHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCEEEEECHHHH RILDWYKKSTGKDYTAEEDPGVISVREIYNYYKANDIKTIVMGASFRSAGEIEALAGCDR HHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCC LTISPNLLDELAKDEGKLERKLSPEGRKPDPKVSVDEKTFRWMMNEDAMATEKLAEGIRA EEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH FAKDLGTLRTMVQKELQLAAA HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSKLDQLREITTVVADTGDIEAVARLKPVDCTTNPSIVLKALGTPMFADAIKEAVAWGK CCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH KQGGNPDAVSSAVADRLAISVGAALVKLVPGRVSTEVDADLSFDTEASLAKARSIIAAYK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DRGIDQDRILIKLASTWEGIRAAEVLQKEGIDCNLTLLFSKAQAIACADAKVFLISPFVG HCCCCCHHEEEEEHHHHCHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCEEEEECHHHH RILDWYKKSTGKDYTAEEDPGVISVREIYNYYKANDIKTIVMGASFRSAGEIEALAGCDR HHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCC LTISPNLLDELAKDEGKLERKLSPEGRKPDPKVSVDEKTFRWMMNEDAMATEKLAEGIRA EEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH FAKDLGTLRTMVQKELQLAAA HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA