| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is eda [H]
Identifier: 209550973
GI number: 209550973
Start: 3509057
End: 3509695
Strand: Reverse
Name: eda [H]
Synonym: Rleg2_3397
Alternate gene names: 209550973
Gene position: 3509695-3509057 (Counterclockwise)
Preceding gene: 209550978
Following gene: 209550972
Centisome position: 77.34
GC content: 65.88
Gene sequence:
>639_bases ATGGGCGAGAAAACAGAAAAGCTCCTTTCCATCCTGAAACTCCAGCCTGTCGTTCCGGTCCTGATCGTCGACGATGCCAA GTCGGCCGTGCTGCTGGCCCGTGCGCTTGTGGCGGGCGGTCTGAAGGCGATCGAGATCACCATGCGCACGCCGGCGGCAC TCGATGCCGTGCGCGCCGTCGCCGCCGAGGTCGAGGGCGCCGAAGTCGGTGCCGGCACGATCCTGAACGCCGCCCATTGG GAAGCCGCCGTCGAGGCCGGTTCGAAATTCATCGTCAGCCCGGGCACGACGCAGGAAATGCTCGATGCCGCTGCCGATTC CGATGTGCCGCTGCTTCCCGGTGCTGCGACCGCCAGCGAGGTCATGGCTTTGCGCGAAGAAGGCTATCAGGTGCTGAAGT TCTTCCCGGCAGAGCAGGCTGGCGGCGCCGCTCTGCTCAAGGCGCTCTCCTCGCCGCTGGCAGGCACGCTGTTCTGCCCG ACTGGCGGCATTTCGCTGAAGAACGCCAATGATTATCTGTCGCTGCCGAACGTCATCTGCGTCGGCGGCTCTTGGGTGGC GCCGAAGGAACTGGTCGCAGCCGGCGACTGGGCGGGGATCACCAAGCTCGCAGCAGAGGCCGCGGCGCTGAAGGCCTGA
Upstream 100 bases:
>100_bases TCATACCCACCCTATCGTAGGAATTGGTTTTATCTCGACAAGGTTCCATTAGGACGTTATTCGGGGTCGAATTCAATCGT TTCAAGGAAGTCGCACGGCT
Downstream 100 bases:
>100_bases GTTTGGGGAGGGGATGAGCCTCACGGCACAATTCCCGCTCCGCTGTTTGTATTCGAGTTGTCGCAAACCTATGTAGTCCT CCAGCTAACAGGGAGACGAC
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGEKTEKLLSILKLQPVVPVLIVDDAKSAVLLARALVAGGLKAIEITMRTPAALDAVRAVAAEVEGAEVGAGTILNAAHW EAAVEAGSKFIVSPGTTQEMLDAAADSDVPLLPGAATASEVMALREEGYQVLKFFPAEQAGGAALLKALSSPLAGTLFCP TGGISLKNANDYLSLPNVICVGGSWVAPKELVAAGDWAGITKLAAEAAALKA
Sequences:
>Translated_212_residues MGEKTEKLLSILKLQPVVPVLIVDDAKSAVLLARALVAGGLKAIEITMRTPAALDAVRAVAAEVEGAEVGAGTILNAAHW EAAVEAGSKFIVSPGTTQEMLDAAADSDVPLLPGAATASEVMALREEGYQVLKFFPAEQAGGAALLKALSSPLAGTLFCP TGGISLKNANDYLSLPNVICVGGSWVAPKELVAAGDWAGITKLAAEAAALKA >Mature_211_residues GEKTEKLLSILKLQPVVPVLIVDDAKSAVLLARALVAGGLKAIEITMRTPAALDAVRAVAAEVEGAEVGAGTILNAAHWE AAVEAGSKFIVSPGTTQEMLDAAADSDVPLLPGAATASEVMALREEGYQVLKFFPAEQAGGAALLKALSSPLAGTLFCPT GGISLKNANDYLSLPNVICVGGSWVAPKELVAAGDWAGITKLAAEAAALKA
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=181, Percent_Identity=49.7237569060773, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.2.14 [H]
Molecular weight: Translated: 21484; Mature: 21353
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00160 ALDOLASE_KDPG_KHG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEKTEKLLSILKLQPVVPVLIVDDAKSAVLLARALVAGGLKAIEITMRTPAALDAVRAV CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHH AAEVEGAEVGAGTILNAAHWEAAVEAGSKFIVSPGTTQEMLDAAADSDVPLLPGAATASE HHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHH VMALREEGYQVLKFFPAEQAGGAALLKALSSPLAGTLFCPTGGISLKNANDYLSLPNVIC HHHHHHCCHHEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCEEE VGGSWVAPKELVAAGDWAGITKLAAEAAALKA ECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GEKTEKLLSILKLQPVVPVLIVDDAKSAVLLARALVAGGLKAIEITMRTPAALDAVRAV CHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHH AAEVEGAEVGAGTILNAAHWEAAVEAGSKFIVSPGTTQEMLDAAADSDVPLLPGAATASE HHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHH VMALREEGYQVLKFFPAEQAGGAALLKALSSPLAGTLFCPTGGISLKNANDYLSLPNVIC HHHHHHCCHHEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCEEE VGGSWVAPKELVAAGDWAGITKLAAEAAALKA ECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]