| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pyk [H]
Identifier: 209550865
GI number: 209550865
Start: 3376521
End: 3377960
Strand: Reverse
Name: pyk [H]
Synonym: Rleg2_3289
Alternate gene names: 209550865
Gene position: 3377960-3376521 (Counterclockwise)
Preceding gene: 209550866
Following gene: 209550864
Centisome position: 74.44
GC content: 64.65
Gene sequence:
>1440_bases ATGAAGCGTAATCGCAAAATTAAAATCCTCGCCACCCTCGGGCCCGCCTCCGCTGAGGAATCGATGATCGAGAAGCTGCA TCAGGCCGGTGCCGATGTCTTCCGCATCAATATGAGCCATGCGAGCCACGACGTGATGCGTACGCTCATCCAGCGCATCC GCTCGGTCGAGGCGCGCTCCGGCCGGCCGATCGGCATTCTTGCCGACCTGCAGGGACCGAAACTGCGAGTCGGCAAGTTC GTCGACAGCAAGGTCGACCTGAAACCCGGCCAGACCTTCACGCTCGACAACAACGAAGCGCTCGGCGATCAGAACCGCGT CTATCTGCCGCACCCCGAGATCCTGGAATCGGTGCAGCCCGGCCACCGCCTGCTGATCGACGACGGCAAGCTCGCGCTGC GCGCCGAAAAATGCGACGGCAAGAGCATCGTCACGACGGTTATTTCGGGCACGCGCATTTCCGACCGCAAGGGCGTCAGC CTTCCCGACACGCTGCTCGGCGTCGGCGCGCTGACGGACAAGGACCGCGCCGATCTCGACGCTGTGCTTGCCACCGACGA TGTCGACTGGGTGGCGCTGTCCTTCGTCCAGCGTCCTGATGACCTTGCCGAAGTGCGCAAGATCGCCCGTGGCCGTGTCG GCCTGATGTCGAAGATCGAAAAACCGCAGGCTCTCGAGCGTATCGAGGAAATCATCGAGCTTTCCGACGCCTTGATGGTC GCTCGTGGCGATCTCGGCGTCGAAATGCCGCTCGAATCGGTTCCCGGCATCCAGAAGCAGCTGATCCGCGCTTGCCGCCG TTCGGGCAAGCCGGTGGTCGTCGCCACGCAGATGCTGGAATCGATGATCTCTGCGCCGGTGCCGACGCGCGCGGAAGTTT CCGACGTCGCAACCGCCGTCTTCGAAGGCGCCGATGCCGTCATGCTCTCGGCCGAGTCGGCCTCGGGCGACTATCCGGTC GAAGCCGTTTCGACCATGGCGTCGATTGCCACCGCCATCGAGCGCGAGCCGCATTATCCGGGCATCATCTATGCCCAGCG CGCCCAGCCGGAAGCGACCGGTGCCGATGCGATTTCGCTCGCTGCGCGCCAGATCGCCGAGACGCTGAAGCTGTCGGCGA TCGTCTGTTACACCTCGTCCGGCACGACAGGCCTTCGCGCCTCGCGTGAGCGTCCGCAGGTGCCGATCCTGGCGCTGTCG CCGATCATCAAGACGGCACGCCGCCTTGCCGTCGTCTGGGGTCTGCATTGCGTCGTCACGCATGACGCGACCGATCTCGA CGACATGGTCAACCGCGCCTGCCGCATCGTCGCCGACGAAGGCTTCGGCAAGCCCGGCGACCGCATCATCATCTCGGCCG GCGTGCCGCTCGGCACACCCGGCGCCACCAATATGATCCGCATCGCCTATATCGGCTCCGACGGCCAGAGCGGCATCTGA
Upstream 100 bases:
>100_bases GTTACCAGAAGATGGGTTTCAAGGAATATGACACGGGCCGCCAGGGCAGCTGGATGGTCCAACTCTCCGACACCCCAGGG ACGCAAGAAAGCCAGAATTG
Downstream 100 bases:
>100_bases TCCGATCGCATCCCTTCGAAACCCCGCCGCCTCAACGAAGCGGCGGGGTTTTTCGTTGATGGCCCGGGCATTGCCAAGGG CGGCGGTGCATGCAAGTTTC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MKRNRKIKILATLGPASAEESMIEKLHQAGADVFRINMSHASHDVMRTLIQRIRSVEARSGRPIGILADLQGPKLRVGKF VDSKVDLKPGQTFTLDNNEALGDQNRVYLPHPEILESVQPGHRLLIDDGKLALRAEKCDGKSIVTTVISGTRISDRKGVS LPDTLLGVGALTDKDRADLDAVLATDDVDWVALSFVQRPDDLAEVRKIARGRVGLMSKIEKPQALERIEEIIELSDALMV ARGDLGVEMPLESVPGIQKQLIRACRRSGKPVVVATQMLESMISAPVPTRAEVSDVATAVFEGADAVMLSAESASGDYPV EAVSTMASIATAIEREPHYPGIIYAQRAQPEATGADAISLAARQIAETLKLSAIVCYTSSGTTGLRASRERPQVPILALS PIIKTARRLAVVWGLHCVVTHDATDLDDMVNRACRIVADEGFGKPGDRIIISAGVPLGTPGATNMIRIAYIGSDGQSGI
Sequences:
>Translated_479_residues MKRNRKIKILATLGPASAEESMIEKLHQAGADVFRINMSHASHDVMRTLIQRIRSVEARSGRPIGILADLQGPKLRVGKF VDSKVDLKPGQTFTLDNNEALGDQNRVYLPHPEILESVQPGHRLLIDDGKLALRAEKCDGKSIVTTVISGTRISDRKGVS LPDTLLGVGALTDKDRADLDAVLATDDVDWVALSFVQRPDDLAEVRKIARGRVGLMSKIEKPQALERIEEIIELSDALMV ARGDLGVEMPLESVPGIQKQLIRACRRSGKPVVVATQMLESMISAPVPTRAEVSDVATAVFEGADAVMLSAESASGDYPV EAVSTMASIATAIEREPHYPGIIYAQRAQPEATGADAISLAARQIAETLKLSAIVCYTSSGTTGLRASRERPQVPILALS PIIKTARRLAVVWGLHCVVTHDATDLDDMVNRACRIVADEGFGKPGDRIIISAGVPLGTPGATNMIRIAYIGSDGQSGI >Mature_479_residues MKRNRKIKILATLGPASAEESMIEKLHQAGADVFRINMSHASHDVMRTLIQRIRSVEARSGRPIGILADLQGPKLRVGKF VDSKVDLKPGQTFTLDNNEALGDQNRVYLPHPEILESVQPGHRLLIDDGKLALRAEKCDGKSIVTTVISGTRISDRKGVS LPDTLLGVGALTDKDRADLDAVLATDDVDWVALSFVQRPDDLAEVRKIARGRVGLMSKIEKPQALERIEEIIELSDALMV ARGDLGVEMPLESVPGIQKQLIRACRRSGKPVVVATQMLESMISAPVPTRAEVSDVATAVFEGADAVMLSAESASGDYPV EAVSTMASIATAIEREPHYPGIIYAQRAQPEATGADAISLAARQIAETLKLSAIVCYTSSGTTGLRASRERPQVPILALS PIIKTARRLAVVWGLHCVVTHDATDLDDMVNRACRIVADEGFGKPGDRIIISAGVPLGTPGATNMIRIAYIGSDGQSGI
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=487, Percent_Identity=36.3449691991786, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI33286420, Length=487, Percent_Identity=36.3449691991786, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI33286418, Length=487, Percent_Identity=36.5503080082135, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=36.2903225806452, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI32967597, Length=496, Percent_Identity=36.2903225806452, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=35.4166666666667, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=35.4166666666667, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=31.0924369747899, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=31.0924369747899, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI310128738, Length=213, Percent_Identity=30.9859154929577, Blast_Score=99, Evalue=7e-21, Organism=Escherichia coli, GI1788160, Length=476, Percent_Identity=38.8655462184874, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1787965, Length=464, Percent_Identity=35.7758620689655, Blast_Score=273, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17544584, Length=485, Percent_Identity=35.0515463917526, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI71984406, Length=483, Percent_Identity=35.1966873706004, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI71984413, Length=483, Percent_Identity=35.1966873706004, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17506829, Length=483, Percent_Identity=35.1966873706004, Blast_Score=248, Evalue=7e-66, Organism=Caenorhabditis elegans, GI17506831, Length=483, Percent_Identity=35.1966873706004, Blast_Score=247, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6319279, Length=484, Percent_Identity=33.2644628099174, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=33.0612244897959, Blast_Score=234, Evalue=2e-62, Organism=Drosophila melanogaster, GI28571814, Length=485, Percent_Identity=36.0824742268041, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24648964, Length=485, Percent_Identity=36.0824742268041, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24648966, Length=387, Percent_Identity=36.6925064599483, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=30.6584362139918, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24646914, Length=241, Percent_Identity=39.4190871369295, Blast_Score=159, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51400; Mature: 51400
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNRKIKILATLGPASAEESMIEKLHQAGADVFRINMSHASHDVMRTLIQRIRSVEARS CCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC GRPIGILADLQGPKLRVGKFVDSKVDLKPGQTFTLDNNEALGDQNRVYLPHPEILESVQP CCCEEEEECCCCCCEEECHHCCCCCCCCCCCEEEECCCCCCCCCCCEECCCHHHHHHCCC GHRLLIDDGKLALRAEKCDGKSIVTTVISGTRISDRKGVSLPDTLLGVGALTDKDRADLD CCEEEEECCCEEEEEECCCCCEEEHHHCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCE AVLATDDVDWVALSFVQRPDDLAEVRKIARGRVGLMSKIEKPQALERIEEIIELSDALMV EEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEE ARGDLGVEMPLESVPGIQKQLIRACRRSGKPVVVATQMLESMISAPVPTRAEVSDVATAV EECCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHH FEGADAVMLSAESASGDYPVEAVSTMASIATAIEREPHYPGIIYAQRAQPEATGADAISL HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHH AARQIAETLKLSAIVCYTSSGTTGLRASRERPQVPILALSPIIKTARRLAVVWGLHCVVT HHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCEEEEEE HDATDLDDMVNRACRIVADEGFGKPGDRIIISAGVPLGTPGATNMIRIAYIGSDGQSGI CCCCCHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MKRNRKIKILATLGPASAEESMIEKLHQAGADVFRINMSHASHDVMRTLIQRIRSVEARS CCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC GRPIGILADLQGPKLRVGKFVDSKVDLKPGQTFTLDNNEALGDQNRVYLPHPEILESVQP CCCEEEEECCCCCCEEECHHCCCCCCCCCCCEEEECCCCCCCCCCCEECCCHHHHHHCCC GHRLLIDDGKLALRAEKCDGKSIVTTVISGTRISDRKGVSLPDTLLGVGALTDKDRADLD CCEEEEECCCEEEEEECCCCCEEEHHHCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCE AVLATDDVDWVALSFVQRPDDLAEVRKIARGRVGLMSKIEKPQALERIEEIIELSDALMV EEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEE ARGDLGVEMPLESVPGIQKQLIRACRRSGKPVVVATQMLESMISAPVPTRAEVSDVATAV EECCCCCCCCHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHH FEGADAVMLSAESASGDYPVEAVSTMASIATAIEREPHYPGIIYAQRAQPEATGADAISL HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHH AARQIAETLKLSAIVCYTSSGTTGLRASRERPQVPILALSPIIKTARRLAVVWGLHCVVT HHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCEEEEEE HDATDLDDMVNRACRIVADEGFGKPGDRIIISAGVPLGTPGATNMIRIAYIGSDGQSGI CCCCCHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA