| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is livM [H]
Identifier: 209550761
GI number: 209550761
Start: 3271733
End: 3272737
Strand: Direct
Name: livM [H]
Synonym: Rleg2_3185
Alternate gene names: 209550761
Gene position: 3271733-3272737 (Clockwise)
Preceding gene: 209550760
Following gene: 209550762
Centisome position: 72.1
GC content: 62.59
Gene sequence:
>1005_bases ATGGCGCTCGTAATGAACAACGAAAACGGACGTCTTCAGCGTCGGCGCGGGGCCCTCGCCCGCGATCTGATCGGAATAGC GGTGATGACGGCCATCGCCGCGATCGGCTACTTCGCCTTCCCCGATAATCTCGCCCTTCTGACCCGGATGATCACGATCG CGCTGCTCGTTCTGTCGCTCGATCTCGTGACCGGTTATTGCGGCGTCGCCACGCTCGGCCATGCCGCGCTCTTCGGCTCC GGCGCCTATGCCGCCGGGATCCTGTCGGCGCATTACGGCATCAATGATCCGCTGCTGATGATGCTAGCCGGCATTGCAGG CGGAGCCATTGCCGGGCTGCTCAGCGGTGCAATCATTCTGCGGGCGCATGGGCTGCCGCAGCTCGTGCTGTCGATTGCGC TCATCAACCTCTTCCACGAATTCGCCAACAAAGCGTCGTCATGGACAGGAGGCAGCGATGGGCTTTCCGGCATCGCGCCG GACCCGATTTTCGGCATTTTCGAATTCGATCTCTACGGTCAAACCGCCTTCTTCTTCGGAATGGCGCTGCTTCTTATTGT CTTCGTGCTGCTCAGATTCCTGGTCCGCTCGCCCTTCGGCATGCTCTGCCGCGGCATCAAGCAGGACCCGCTGCGCATCC GCGCCATGGGTGCTTCGCCGAAGGCGGCGCTCATCAGGATGTACGTCATTTCAGGCGCCGTGGCCGGGGTCGGCGGCGCC TTGAATGCGATCTCGACGCAGGTCGTCGGCCTCGACAGCCTGTCTTTCACCCAATCGGCCGAAGCGTTGGTCATGCTCGT GCTCGGCGGCACCGGCTCTCTCTTCGGTGCGCTCTCCGGCACGGTCATCTTCATGCTCTTCGAAGACTATGTCTCGGCCG CCAATCCCTTCCACTGGCTGACCATGGTCGGCGCGCTGTTGATTGCCGTCGTGCTTTTCGCGCCGAAAGGTCTCTACGGG ACCGCCGCGAGCCTTATCGGCCGCCGCAAGGAGCAGCGGTCATGA
Upstream 100 bases:
>100_bases CGTTATCTGATGCCTGAGTTCGGCGAATTCTTCTTCTACCTCGCGGTGATTGCGATCATCTGCGTCTTCCCGCGCGGCCT CGCCGGAAGGGCGAAGTGAG
Downstream 100 bases:
>100_bases GCCCGGTCTTCGAAGTCGCCAATCTCAAAAAAGCCTTCGGCGGCCTTGCCGTCACCAATGATGTCTCACTGGCGATGTCG CCGGGCGATCGTGTGGCGCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein M [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MALVMNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGS GAYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIILRAHGLPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAP DPIFGIFEFDLYGQTAFFFGMALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISGAVAGVGGA LNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVSAANPFHWLTMVGALLIAVVLFAPKGLYG TAASLIGRRKEQRS
Sequences:
>Translated_334_residues MALVMNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGS GAYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIILRAHGLPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAP DPIFGIFEFDLYGQTAFFFGMALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISGAVAGVGGA LNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVSAANPFHWLTMVGALLIAVVLFAPKGLYG TAASLIGRRKEQRS >Mature_333_residues ALVMNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSLDLVTGYCGVATLGHAALFGSG AYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIILRAHGLPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAPD PIFGIFEFDLYGQTAFFFGMALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISGAVAGVGGAL NAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVSAANPFHWLTMVGALLIAVVLFAPKGLYGT AASLIGRRKEQRS
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=298, Percent_Identity=27.5167785234899, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 34929; Mature: 34798
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVMNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSL CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DLVTGYCGVATLGHAALFGSGAYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIIL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAHGLPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAPDPIFGIFEFDLYGQTAFFFG HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH MALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISGAVAGVGGA HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHH LNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVSAANPFHWL HHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH TMVGALLIAVVLFAPKGLYGTAASLIGRRKEQRS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ALVMNNENGRLQRRRGALARDLIGIAVMTAIAAIGYFAFPDNLALLTRMITIALLVLSL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH DLVTGYCGVATLGHAALFGSGAYAAGILSAHYGINDPLLMMLAGIAGGAIAGLLSGAIIL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAHGLPQLVLSIALINLFHEFANKASSWTGGSDGLSGIAPDPIFGIFEFDLYGQTAFFFG HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH MALLLIVFVLLRFLVRSPFGMLCRGIKQDPLRIRAMGASPKAALIRMYVISGAVAGVGGA HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHH LNAISTQVVGLDSLSFTQSAEALVMLVLGGTGSLFGALSGTVIFMLFEDYVSAANPFHWL HHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH TMVGALLIAVVLFAPKGLYGTAASLIGRRKEQRS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2195019; 8041620; 9278503 [H]