| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550742
Identifier: 209550742
GI number: 209550742
Start: 3250028
End: 3251533
Strand: Reverse
Name: 209550742
Synonym: Rleg2_3166
Alternate gene names: NA
Gene position: 3251533-3250028 (Counterclockwise)
Preceding gene: 209550743
Following gene: 209550741
Centisome position: 71.65
GC content: 62.95
Gene sequence:
>1506_bases ATGGATCTTTTCAGCAATCTCGCGCTCGGTTTTGCGACAGCCGGCACTCTGGATAACCTGCTCTTCTGCTTGATCGGCGT GCTGCTCGGCACGCTGATCGGCGTGCTGCCCGGCATCGGCGCCACGGCGACGATCGCCATGCTTTTGCCGATCACCTTCC AGCTTGAGCCGGTCTCCTCGCTGATCATGCTGGCCGGCATCTATTACGGCGCCCAGTACGGCGGTTCGACGACGGCGATT CTCATCAACATGCCGGGCGAATCCTCCTCCGCCGTCACCGCGATCGACGGTTACCAGATGGCCCGCAAGGGCAGGGCGGG AGCAGCGCTTGCGATCGCCGCACTCGGCTCATTCTTTGCCGGCACGGTCTCGACCTTCCTCGTTGCGATTTTCGCGCCGC CGCTGACCGCCATCGCGCTGCAATTCGGCTCGGCGGAATATTTCTCGCTGATGATCGTCGGCCTTGTTTCGTCGATTGCG CTCGCGCACGGCTCCGTCGTCAAAGCGCTGGCGATGGTGGCGCTCGGGCTGCTGCTCGGCCTCGTCGGCACCGACATCTA TACCGGCACGCCGCGCTTCACGCTCGGCATCCGCGAATATGCCGACGGGCTGAATTTTGTGGCGCTCGCGGTCGGGGTCT TCGGCGTGGCAGAAATTCTCCGCAACCTCGAAGGTGAATCGACACGCTCAGTACTGATGGCCAAGGTGTCCGGTCTTTTG CCGTCTCGTCAGGAATTCAAGGAGATGATCGCGCCGATCATTCGCGGCACGGCGATCGGTTCGGCGCTCGGCATCCTGCC GGGTGGTGGGGCGATCCTTGCCTCCTTTGCCTCCTATACGGTGGAGAAACGCCTGTCGAAGACGCCGGAGGAATTCGGCA AGGGCGCCGTCGCCGGCGTGGCGGGTCCGGAATCGGCCAACAATGCCGGGGCGCAGACCTCGTTCATTCCGCTTTTGACA CTCGGCATTCCGGCCAATCCCGTCATGGCGCTGATGGTCGGCGCCATGATCATTCAGGGCATCGTGCCGGGACCGAATGT CGCCACCGAGCAGCCGGCGCTGTTTTGGGGCATCATCGCCTCGATGTGGATCGGCAATTTGATGCTGGTCATCCTCAACC TGCCGCTGATCGGGCTCTGGGTGAAACTGCTGACCGTGCCCTATTATGTGCTCTTCCCCATCATCATGGCCTTCTGCTCG ATCGGGGTCTACAGCGTCAACGCCAACGTCTACGACCTCTATGCCGTCGCCTTCTTCGGGCTGATCGGCTACGTGCTGGC AAAGCTTCGCTGCGAGCCGGCGCCGCTCCTGCTCGGCTTCGTGCTCGGGCCGCTGCTCGAAGAGAACCTGCGGCGCGCGA TGATCCTGTCGCGCGGCGATCCCACTACCTTCATCACGCGGCCGATCAGCGCCACGCTTCTGGCGATCGCGGTCGCCGTG CTCATCGTGGTCTTCCTGCCGAGCGTCAAGAAGAAGCGCGAAGAGGTGTTCGTCGAGGAGACTTGA
Upstream 100 bases:
>100_bases TTCGCTGCTGTTGACGGTCTTTTCGGTGGCGGTCTTCAGCTATGGGCTCGGCCTGCCGTTCGAGCGCTTCGGCCCCTGGG TCCGGTTCTAGGAGGCGATG
Downstream 100 bases:
>100_bases TGGTTGAACTTGCGGGCTGTTTGATCAACAAAGGATGATCTGACGAGGGCGCCGATGGGCGCCCGCTACGCTTGACAGGA TATCCAGGCTCATGAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MDLFSNLALGFATAGTLDNLLFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSSLIMLAGIYYGAQYGGSTTAI LINMPGESSSAVTAIDGYQMARKGRAGAALAIAALGSFFAGTVSTFLVAIFAPPLTAIALQFGSAEYFSLMIVGLVSSIA LAHGSVVKALAMVALGLLLGLVGTDIYTGTPRFTLGIREYADGLNFVALAVGVFGVAEILRNLEGESTRSVLMAKVSGLL PSRQEFKEMIAPIIRGTAIGSALGILPGGGAILASFASYTVEKRLSKTPEEFGKGAVAGVAGPESANNAGAQTSFIPLLT LGIPANPVMALMVGAMIIQGIVPGPNVATEQPALFWGIIASMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCS IGVYSVNANVYDLYAVAFFGLIGYVLAKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFITRPISATLLAIAVAV LIVVFLPSVKKKREEVFVEET
Sequences:
>Translated_501_residues MDLFSNLALGFATAGTLDNLLFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSSLIMLAGIYYGAQYGGSTTAI LINMPGESSSAVTAIDGYQMARKGRAGAALAIAALGSFFAGTVSTFLVAIFAPPLTAIALQFGSAEYFSLMIVGLVSSIA LAHGSVVKALAMVALGLLLGLVGTDIYTGTPRFTLGIREYADGLNFVALAVGVFGVAEILRNLEGESTRSVLMAKVSGLL PSRQEFKEMIAPIIRGTAIGSALGILPGGGAILASFASYTVEKRLSKTPEEFGKGAVAGVAGPESANNAGAQTSFIPLLT LGIPANPVMALMVGAMIIQGIVPGPNVATEQPALFWGIIASMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCS IGVYSVNANVYDLYAVAFFGLIGYVLAKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFITRPISATLLAIAVAV LIVVFLPSVKKKREEVFVEET >Mature_501_residues MDLFSNLALGFATAGTLDNLLFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSSLIMLAGIYYGAQYGGSTTAI LINMPGESSSAVTAIDGYQMARKGRAGAALAIAALGSFFAGTVSTFLVAIFAPPLTAIALQFGSAEYFSLMIVGLVSSIA LAHGSVVKALAMVALGLLLGLVGTDIYTGTPRFTLGIREYADGLNFVALAVGVFGVAEILRNLEGESTRSVLMAKVSGLL PSRQEFKEMIAPIIRGTAIGSALGILPGGGAILASFASYTVEKRLSKTPEEFGKGAVAGVAGPESANNAGAQTSFIPLLT LGIPANPVMALMVGAMIIQGIVPGPNVATEQPALFWGIIASMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCS IGVYSVNANVYDLYAVAFFGLIGYVLAKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFITRPISATLLAIAVAV LIVVFLPSVKKKREEVFVEET
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52270; Mature: 52270
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLFSNLALGFATAGTLDNLLFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHH LIMLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMARKGRAGAALAIAALGSFFA HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHH GTVSTFLVAIFAPPLTAIALQFGSAEYFSLMIVGLVSSIALAHGSVVKALAMVALGLLLG HHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGTDIYTGTPRFTLGIREYADGLNFVALAVGVFGVAEILRNLEGESTRSVLMAKVSGLL HHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC PSRQEFKEMIAPIIRGTAIGSALGILPGGGAILASFASYTVEKRLSKTPEEFGKGAVAGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEC AGPESANNAGAQTSFIPLLTLGIPANPVMALMVGAMIIQGIVPGPNVATEQPALFWGIIA CCCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH SMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCSIGVYSVNANVYDLYAVAFFG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH LIGYVLAKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFITRPISATLLAIAVAV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHH LIVVFLPSVKKKREEVFVEET HHHHHHCCHHHHHHHCCCCCC >Mature Secondary Structure MDLFSNLALGFATAGTLDNLLFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHH LIMLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMARKGRAGAALAIAALGSFFA HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHH GTVSTFLVAIFAPPLTAIALQFGSAEYFSLMIVGLVSSIALAHGSVVKALAMVALGLLLG HHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGTDIYTGTPRFTLGIREYADGLNFVALAVGVFGVAEILRNLEGESTRSVLMAKVSGLL HHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC PSRQEFKEMIAPIIRGTAIGSALGILPGGGAILASFASYTVEKRLSKTPEEFGKGAVAGV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEC AGPESANNAGAQTSFIPLLTLGIPANPVMALMVGAMIIQGIVPGPNVATEQPALFWGIIA CCCCCCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH SMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCSIGVYSVNANVYDLYAVAFFG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH LIGYVLAKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFITRPISATLLAIAVAV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHH LIVVFLPSVKKKREEVFVEET HHHHHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]