| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ureE [H]
Identifier: 209550624
GI number: 209550624
Start: 3109631
End: 3110212
Strand: Reverse
Name: ureE [H]
Synonym: Rleg2_3048
Alternate gene names: 209550624
Gene position: 3110212-3109631 (Counterclockwise)
Preceding gene: 209550625
Following gene: 209550623
Centisome position: 68.54
GC content: 61.68
Gene sequence:
>582_bases ATGCAGCGCGTTACCTCCTATCTTCCCGCCGGAACCCCGTCCTCCCATCCGACCGCCCAGGTCAAGCTGCCGCACGATCT GCGCCATCTGCGCCGCAAGCTGCTGCATCTGGAAAATGGCGAGATGGTCATGCTCGATCTCAAGGACCCGGTGCTTTTCG CCAATGGCGACCTGCTGGTGCGCGACGACGGCGAACTGATCGAGATTCTCGCGGCCGATGAGAAACTGTTTGAAATTCGC GGCCGTGACCGCACCCATCTGGTCGAGCTTGCCTGGCATCTCGGCAACCGCCATCTCGCGGCCCAGATCGAGGAAGACCG TATCGTCATCCTGCGCGACCACGTCATTCGCAGCATGCTGCAGGGGCTCGGCGCCACCGTCCTCGACATCGACGAACCCT TCCAGCCGGCGCGCGGCGCCTATCATTCCCATGGCGCGCATTCGCACGATCAGGGTCATGCGGCGCATGACCACGGGAAT GAGCACAAACATGATCACGGCCACGACCATGTGCATGGGCCGGGATGTGATCACGACCATGACCATGACCACGGACATCA TCACGACCATAAGCACGACTGA
Upstream 100 bases:
>100_bases GGCTTACGGAATATAAAAGCCCGAAGCGAGCACAAAGGCCATTGGTGCTTGCATCGGGAAAGGCTATTTTGCATGGTCGC CTCAGCAAAACGGACATATC
Downstream 100 bases:
>100_bases GGCTCGATGACGGGAGATCGTGAGCTGCAGGCATTGCTGCGTCTGACGGCATGGCTCTCGCCGGCCTTTCCGGTCGGCAG CTTTGCCTATTCGGGCGGGC
Product: UreE urease accessory domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MQRVTSYLPAGTPSSHPTAQVKLPHDLRHLRRKLLHLENGEMVMLDLKDPVLFANGDLLVRDDGELIEILAADEKLFEIR GRDRTHLVELAWHLGNRHLAAQIEEDRIVILRDHVIRSMLQGLGATVLDIDEPFQPARGAYHSHGAHSHDQGHAAHDHGN EHKHDHGHDHVHGPGCDHDHDHDHGHHHDHKHD
Sequences:
>Translated_193_residues MQRVTSYLPAGTPSSHPTAQVKLPHDLRHLRRKLLHLENGEMVMLDLKDPVLFANGDLLVRDDGELIEILAADEKLFEIR GRDRTHLVELAWHLGNRHLAAQIEEDRIVILRDHVIRSMLQGLGATVLDIDEPFQPARGAYHSHGAHSHDQGHAAHDHGN EHKHDHGHDHVHGPGCDHDHDHDHGHHHDHKHD >Mature_193_residues MQRVTSYLPAGTPSSHPTAQVKLPHDLRHLRRKLLHLENGEMVMLDLKDPVLFANGDLLVRDDGELIEILAADEKLFEIR GRDRTHLVELAWHLGNRHLAAQIEEDRIVILRDHVIRSMLQGLGATVLDIDEPFQPARGAYHSHGAHSHDQGHAAHDHGN EHKHDHGHDHVHGPGCDHDHDHDHGHHHDHKHD
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 21904; Mature: 21904
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRVTSYLPAGTPSSHPTAQVKLPHDLRHLRRKLLHLENGEMVMLDLKDPVLFANGDLLV CCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCEEE RDDGELIEILAADEKLFEIRGRDRTHLVELAWHLGNRHLAAQIEEDRIVILRDHVIRSML ECCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHH QGLGATVLDIDEPFQPARGAYHSHGAHSHDQGHAAHDHGNEHKHDHGHDHVHGPGCDHDH HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHDHGHHHDHKHD CCCCCCCCCCCCC >Mature Secondary Structure MQRVTSYLPAGTPSSHPTAQVKLPHDLRHLRRKLLHLENGEMVMLDLKDPVLFANGDLLV CCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCEEE RDDGELIEILAADEKLFEIRGRDRTHLVELAWHLGNRHLAAQIEEDRIVILRDHVIRSML ECCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHH QGLGATVLDIDEPFQPARGAYHSHGAHSHDQGHAAHDHGNEHKHDHGHDHVHGPGCDHDH HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHDHGHHHDHKHD CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA