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The map label for this gene is ureF

Identifier: 209550623

GI number: 209550623

Start: 3108953

End: 3109624

Strand: Reverse

Name: ureF

Synonym: Rleg2_3047

Alternate gene names: 209550623

Gene position: 3109624-3108953 (Counterclockwise)

Preceding gene: 209550624

Following gene: 209550622

Centisome position: 68.52

GC content: 67.86

Gene sequence:

>672_bases
ATGACGGGAGATCGTGAGCTGCAGGCATTGCTGCGTCTGACGGCATGGCTCTCGCCGGCCTTTCCGGTCGGCAGCTTTGC
CTATTCGGGCGGGCTGGAGCGGGCGGTGGCGGACGGGCTGGTCACCGATGCCGTCTCGCTGGCGGCTTGGATCGGCACGC
TAATCGGCTATGGTTCGGTTTGGAACGATGCGGTGCTTTTGGCCGAAAGCCACAGGTGGCAGGCAGAGCCCGCACGCCTT
TTCGAGATTGCCGCGCTTGCGGAGGCGCTTGCCGGATCGCGCGAGCGCCATCAGGAAACCATGCTGCTCGGCGACGCCTT
CCTGACGGCGGCACGCGCCTGGCCGGATGGCGTGTTCGAAAGACTGCCTGACAAGGCGGCCTATCCCGTCGCGGTCGGGG
CGGTCACTGGCGCGCACGGCATCGGGCCTGAGAAGGCGCTCGCCGTCTTCCTGCATGCCTATGCCTCGCAGGCGGTTTCC
TCAGGCATCCGCCTCGGCGTGACCGGCCAGAGGGACGGTGTTGCCGTGCTTGCCGGTCTCGAAGAGTGCATCACGGAGGT
CGCGCGGCGGGCAGCGGCCTCGACGCTCGACGATCTCGGCTCGGCGACGGTGCAGGCCGATATTGCCGGCCTGCGGCATG
AGACGCAGGCGACGCGGCTGTTCCGTTCGTGA

Upstream 100 bases:

>100_bases
ACATGATCACGGCCACGACCATGTGCATGGGCCGGGATGTGATCACGACCATGACCATGACCACGGACATCATCACGACC
ATAAGCACGACTGAGGCTCG

Downstream 100 bases:

>100_bases
TGGCGTAAATTATCCGACCATCTGCGTCATTTGACGGTGGCGTGCGCCCTCGGCGTCGCTATCATCGGGTTCGATTGGAG
TAAGGCATATGAAATCTAGA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTGDRELQALLRLTAWLSPAFPVGSFAYSGGLERAVADGLVTDAVSLAAWIGTLIGYGSVWNDAVLLAESHRWQAEPARL
FEIAALAEALAGSRERHQETMLLGDAFLTAARAWPDGVFERLPDKAAYPVAVGAVTGAHGIGPEKALAVFLHAYASQAVS
SGIRLGVTGQRDGVAVLAGLEECITEVARRAAASTLDDLGSATVQADIAGLRHETQATRLFRS

Sequences:

>Translated_223_residues
MTGDRELQALLRLTAWLSPAFPVGSFAYSGGLERAVADGLVTDAVSLAAWIGTLIGYGSVWNDAVLLAESHRWQAEPARL
FEIAALAEALAGSRERHQETMLLGDAFLTAARAWPDGVFERLPDKAAYPVAVGAVTGAHGIGPEKALAVFLHAYASQAVS
SGIRLGVTGQRDGVAVLAGLEECITEVARRAAASTLDDLGSATVQADIAGLRHETQATRLFRS
>Mature_222_residues
TGDRELQALLRLTAWLSPAFPVGSFAYSGGLERAVADGLVTDAVSLAAWIGTLIGYGSVWNDAVLLAESHRWQAEPARLF
EIAALAEALAGSRERHQETMLLGDAFLTAARAWPDGVFERLPDKAAYPVAVGAVTGAHGIGPEKALAVFLHAYASQAVSS
GIRLGVTGQRDGVAVLAGLEECITEVARRAAASTLDDLGSATVQADIAGLRHETQATRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_RHILW (B5ZMN6)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002282540.1
- GeneID:   6981792
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_3047
- HOGENOM:   HBG709295
- OMA:   WLSPAFP
- ProtClustDB:   CLSK2486785
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 23423; Mature: 23292

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDRELQALLRLTAWLSPAFPVGSFAYSGGLERAVADGLVTDAVSLAAWIGTLIGYGSV
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WNDAVLLAESHRWQAEPARLFEIAALAEALAGSRERHQETMLLGDAFLTAARAWPDGVFE
HCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
RLPDKAAYPVAVGAVTGAHGIGPEKALAVFLHAYASQAVSSGIRLGVTGQRDGVAVLAGL
HCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
EECITEVARRAAASTLDDLGSATVQADIAGLRHETQATRLFRS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGDRELQALLRLTAWLSPAFPVGSFAYSGGLERAVADGLVTDAVSLAAWIGTLIGYGSV
CCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WNDAVLLAESHRWQAEPARLFEIAALAEALAGSRERHQETMLLGDAFLTAARAWPDGVFE
HCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
RLPDKAAYPVAVGAVTGAHGIGPEKALAVFLHAYASQAVSSGIRLGVTGQRDGVAVLAGL
HCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
EECITEVARRAAASTLDDLGSATVQADIAGLRHETQATRLFRS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA