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The map label for this gene is ycjS [C]

Identifier: 209550582

GI number: 209550582

Start: 3070635

End: 3071678

Strand: Reverse

Name: ycjS [C]

Synonym: Rleg2_3006

Alternate gene names: 209550582

Gene position: 3071678-3070635 (Counterclockwise)

Preceding gene: 209550583

Following gene: 209550581

Centisome position: 67.69

GC content: 62.74

Gene sequence:

>1044_bases
ATGCGACTACTCGTTCTTGGCACGGGCGTGATGGCGAAAAACCAGCTCGCCCGCTTTTCCCTCATCGATGGCGTGACGGT
GGTCGGCGCCGTCGACACCGATCCCGAACGGCTTTCCGCCTTCGCCGACAAGTTCAACATCGAAAAGCGGTTTCTGTCCC
TGGAAGAGGCGATCGCCTGGGGTGAATTCGATGCGGCGACAAATGTCACGCCCGACCGGATCCATCACCCGACGACCATG
GCGCTGATTGCCGCCGGCAAACATGTGTTCTGCGAAAAGCCGCTGGCGGAGAACTATGCGAAGGCGCTGGAGATGACGGA
GGCAGCGGAAAAGGCCGGCGTCATCAACATGGTGAACCTGACCTACCGCAATGTCGCGCCGTTGCAGCGGGCCCGCGAGA
TGGTACTATCAGGCGAACTCGGCACGATCAGGCATGTGGAAGCCTCCTATCTGCAGAGCTGGCTCGTGTCGCGCGCCTGG
GGCGATTGGCGGACGGAATCGACCTGGCTGTGGCGGCTTTCCACTGGCCACGGCTCGAACGGCGTGCTTGGCGACGTCGG
CATCCATATCCTCGATTTCGCCGCCTATGGCGCAGCGACCGACATCGACCACGTCTTTGCGCGGCTGAAGACCTTCAACA
AGGCGCCGGGCGGCCAGATCGGCGAATATATGCTGGATGCCAATGACAGCTTCACCATGTCGGTCGATTTCGCCAACGGC
GCGCTCGGCGTCATCCACGCCAGCCGCTGGGCCACGGGCCATCTGAACGAGCTGAAGCTGCGCATCTACGGCGAAAAAGG
CAGCCTCGAGGTCATCCATCGTCCCAACGGTTCCGAGCTGCATGGCTGCCTCGGCGAAGGTGTCGAAACCGCCACCTGGA
CGCAGATCGAGGTTGAACCGGTGGCGACCAACTACGAGCGTTTTGCCGAGGCGGTGGCAACCGGCGTCCAGCCGGACCCG
AACTTCCGCCACGCCGCCAACCTGCAGAAGGTGCTGGATCTCGCCATGGTGACCGAGCGCGAGCGGCGCGAGCTGAAAGT
CTGA

Upstream 100 bases:

>100_bases
CGCCCCAAATGTGCCGGTAGAAAAGGCACTGGAGCCGATCGTCGAACGCGGCCCGAGACTGCACCAGGCCGGCGAAGCCG
GTTACCGCTGAGGAGCATCC

Downstream 100 bases:

>100_bases
TCTGCCTTACGATCAGGTGTAGATGTAACGGGGCAAGGAACGCGGCATGAAAAGCCTTCTGACAAGCTGGCCGCTTTGGG
CGCTTCTTTCCGCCGGCTTT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRLLVLGTGVMAKNQLARFSLIDGVTVVGAVDTDPERLSAFADKFNIEKRFLSLEEAIAWGEFDAATNVTPDRIHHPTTM
ALIAAGKHVFCEKPLAENYAKALEMTEAAEKAGVINMVNLTYRNVAPLQRAREMVLSGELGTIRHVEASYLQSWLVSRAW
GDWRTESTWLWRLSTGHGSNGVLGDVGIHILDFAAYGAATDIDHVFARLKTFNKAPGGQIGEYMLDANDSFTMSVDFANG
ALGVIHASRWATGHLNELKLRIYGEKGSLEVIHRPNGSELHGCLGEGVETATWTQIEVEPVATNYERFAEAVATGVQPDP
NFRHAANLQKVLDLAMVTERERRELKV

Sequences:

>Translated_347_residues
MRLLVLGTGVMAKNQLARFSLIDGVTVVGAVDTDPERLSAFADKFNIEKRFLSLEEAIAWGEFDAATNVTPDRIHHPTTM
ALIAAGKHVFCEKPLAENYAKALEMTEAAEKAGVINMVNLTYRNVAPLQRAREMVLSGELGTIRHVEASYLQSWLVSRAW
GDWRTESTWLWRLSTGHGSNGVLGDVGIHILDFAAYGAATDIDHVFARLKTFNKAPGGQIGEYMLDANDSFTMSVDFANG
ALGVIHASRWATGHLNELKLRIYGEKGSLEVIHRPNGSELHGCLGEGVETATWTQIEVEPVATNYERFAEAVATGVQPDP
NFRHAANLQKVLDLAMVTERERRELKV
>Mature_347_residues
MRLLVLGTGVMAKNQLARFSLIDGVTVVGAVDTDPERLSAFADKFNIEKRFLSLEEAIAWGEFDAATNVTPDRIHHPTTM
ALIAAGKHVFCEKPLAENYAKALEMTEAAEKAGVINMVNLTYRNVAPLQRAREMVLSGELGTIRHVEASYLQSWLVSRAW
GDWRTESTWLWRLSTGHGSNGVLGDVGIHILDFAAYGAATDIDHVFARLKTFNKAPGGQIGEYMLDANDSFTMSVDFANG
ALGVIHASRWATGHLNELKLRIYGEKGSLEVIHRPNGSELHGCLGEGVETATWTQIEVEPVATNYERFAEAVATGVQPDP
NFRHAANLQKVLDLAMVTERERRELKV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=251, Percent_Identity=27.4900398406374, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38214; Mature: 38214

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVLGTGVMAKNQLARFSLIDGVTVVGAVDTDPERLSAFADKFNIEKRFLSLEEAIAW
CEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GEFDAATNVTPDRIHHPTTMALIAAGKHVFCEKPLAENYAKALEMTEAAEKAGVINMVNL
CCCCCCCCCCHHHCCCCHHEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEE
TYRNVAPLQRAREMVLSGELGTIRHVEASYLQSWLVSRAWGDWRTESTWLWRLSTGHGSN
HHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
GVLGDVGIHILDFAAYGAATDIDHVFARLKTFNKAPGGQIGEYMLDANDSFTMSVDFANG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEECCC
ALGVIHASRWATGHLNELKLRIYGEKGSLEVIHRPNGSELHGCLGEGVETATWTQIEVEP
CEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCEEEEEEEEE
VATNYERFAEAVATGVQPDPNFRHAANLQKVLDLAMVTERERRELKV
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLLVLGTGVMAKNQLARFSLIDGVTVVGAVDTDPERLSAFADKFNIEKRFLSLEEAIAW
CEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GEFDAATNVTPDRIHHPTTMALIAAGKHVFCEKPLAENYAKALEMTEAAEKAGVINMVNL
CCCCCCCCCCHHHCCCCHHEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEE
TYRNVAPLQRAREMVLSGELGTIRHVEASYLQSWLVSRAWGDWRTESTWLWRLSTGHGSN
HHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
GVLGDVGIHILDFAAYGAATDIDHVFARLKTFNKAPGGQIGEYMLDANDSFTMSVDFANG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEECCC
ALGVIHASRWATGHLNELKLRIYGEKGSLEVIHRPNGSELHGCLGEGVETATWTQIEVEP
CEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCEEEEEEEEE
VATNYERFAEAVATGVQPDPNFRHAANLQKVLDLAMVTERERRELKV
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]