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The map label for this gene is 209550581

Identifier: 209550581

GI number: 209550581

Start: 3070151

End: 3070588

Strand: Reverse

Name: 209550581

Synonym: Rleg2_3005

Alternate gene names: NA

Gene position: 3070588-3070151 (Counterclockwise)

Preceding gene: 209550582

Following gene: 209550574

Centisome position: 67.66

GC content: 62.1

Gene sequence:

>438_bases
ATGAAAAGCCTTCTGACAAGCTGGCCGCTTTGGGCGCTTCTTTCCGCCGGCTTTGCAGCGCTCACGGCGATTTTCGCCAA
GGTCGGCGTCGAGAACGTCAATTCCGACTTCGCGACCTTCATTCGCACCATCGTTATCCTGCTGGCGGCGGGAATGATGG
TCTACATCACCGGCAGCTGGCAGGAACCGTCTTCGGTATCGAGCCGGAGCTGGCTCTTCCTGGCGCTCTCCGGCCTTGCC
ACCGGCGCATCCTGGATCTGCTATTTCCGGGCTCTGAAGCTCGGGGATGCTGCCCGGGTCGCCCCGATCGACAAGCTCTC
CGTCGTCTTCGTGGCCGTCTTTGCGGTGCTGTTCCTGGGTGAACGCCTGACGCTTCCGAACTGGCTTGGCGTTATCATGA
TCGCCGGCGGCGCCGTGCTCGTCGCTTACAGGGCCTGA

Upstream 100 bases:

>100_bases
GTGCTGGATCTCGCCATGGTGACCGAGCGCGAGCGGCGCGAGCTGAAAGTCTGATCTGCCTTACGATCAGGTGTAGATGT
AACGGGGCAAGGAACGCGGC

Downstream 100 bases:

>100_bases
ACCGGCGCAAGGATAATGCGTTTTCCCAGTCCCACGACAAGAGGCCCCGCCGAGGCGGGGCCGAAAGTTGCCGAGCCGCA
GCAGGCGGCCTCGGTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKSLLTSWPLWALLSAGFAALTAIFAKVGVENVNSDFATFIRTIVILLAAGMMVYITGSWQEPSSVSSRSWLFLALSGLA
TGASWICYFRALKLGDAARVAPIDKLSVVFVAVFAVLFLGERLTLPNWLGVIMIAGGAVLVAYRA

Sequences:

>Translated_145_residues
MKSLLTSWPLWALLSAGFAALTAIFAKVGVENVNSDFATFIRTIVILLAAGMMVYITGSWQEPSSVSSRSWLFLALSGLA
TGASWICYFRALKLGDAARVAPIDKLSVVFVAVFAVLFLGERLTLPNWLGVIMIAGGAVLVAYRA
>Mature_145_residues
MKSLLTSWPLWALLSAGFAALTAIFAKVGVENVNSDFATFIRTIVILLAAGMMVYITGSWQEPSSVSSRSWLFLALSGLA
TGASWICYFRALKLGDAARVAPIDKLSVVFVAVFAVLFLGERLTLPNWLGVIMIAGGAVLVAYRA

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 15532; Mature: 15532

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLTSWPLWALLSAGFAALTAIFAKVGVENVNSDFATFIRTIVILLAAGMMVYITGSW
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
QEPSSVSSRSWLFLALSGLATGASWICYFRALKLGDAARVAPIDKLSVVFVAVFAVLFLG
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
ERLTLPNWLGVIMIAGGAVLVAYRA
CCCCCCHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MKSLLTSWPLWALLSAGFAALTAIFAKVGVENVNSDFATFIRTIVILLAAGMMVYITGSW
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
QEPSSVSSRSWLFLALSGLATGASWICYFRALKLGDAARVAPIDKLSVVFVAVFAVLFLG
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
ERLTLPNWLGVIMIAGGAVLVAYRA
CCCCCCHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]