| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550559
Identifier: 209550559
GI number: 209550559
Start: 3046236
End: 3046934
Strand: Reverse
Name: 209550559
Synonym: Rleg2_2983
Alternate gene names: NA
Gene position: 3046934-3046236 (Counterclockwise)
Preceding gene: 209550560
Following gene: 209550558
Centisome position: 67.14
GC content: 61.8
Gene sequence:
>699_bases ATGGCAAGAATTGGTGTTTATCGTAAGCTTGCATATAGCGGAATTGCCGTGGCGATGTTTGCCGGCATGAATTCAAGCGC CTTTGCGGCTGCTTGCCTGGGCCCGGCAAATCTCACTTCTGTTGATGTCAGCGGGTTTACGGCCAACCCCGCCGTTCTGC TCGACATGTCCGATCCATTGATTTTGTCGTCGCGTGTTCGCGCCCTGGTCGGGACCAGCAATGACGCGCTGTCGCCGGTG ATCGAACAGGCCAAGGCGGCCACTGCCGCGCAGATGGCGGCAATCGGCTCCGGTCTTGGGCGGGCCGCAAACAGCTGCCA GGTGTCGGATCCGCAGTTCAAGCTGGCGATCGAAAAGGCCGTTGCCGATGCGGCAAGTGCCGATCCCAACCTTGCGCCGC TGCTCGCAGCCTTTGCAAAGGTCCTCGCAGAAGGTGGGACCGCAGCGCTCGGCCCGGGTGGCGCTGCCGCTGCAGCATCC GGTATCGGCAACACGGGATCGATTGGGCAGACAGGTCCTGGATCGGACGATGGCACGCCTTATGACGGCGCCGCGACGAC TGCGGGTACGTTGAAGGTGTCGAATGCCAGCGACGACTCGTCTTCGACGACCACGACGATCGTCAGCACAAGTGGGGGCG GTCAATCCTCTTCCGACACGACGCAATCGACGAGCCCGAGCGTCGCGGTCATACAATAG
Upstream 100 bases:
>100_bases GTCCAAGATCTCGGAAATTGATTGAAATAGGCAAGCCGGCATCGATCGCGAGTCATCGATGCCGGCGGCCTATATAGCGG ATTTGATGAAGGACTATGTT
Downstream 100 bases:
>100_bases CTGGAATTGCCCTTAGATCTTAGCGCTTGATTTGTTGGAGATCGAAATTGCTATCGCCAGATAAACTTACGCCGCGTATC GACCCCTCCCGCGATACGGG
Product: exopolysaccharide inner membrane protein
Products: NA
Alternate protein names: Polysaccharide Transport Outer Membrane Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MARIGVYRKLAYSGIAVAMFAGMNSSAFAAACLGPANLTSVDVSGFTANPAVLLDMSDPLILSSRVRALVGTSNDALSPV IEQAKAATAAQMAAIGSGLGRAANSCQVSDPQFKLAIEKAVADAASADPNLAPLLAAFAKVLAEGGTAALGPGGAAAAAS GIGNTGSIGQTGPGSDDGTPYDGAATTAGTLKVSNASDDSSSTTTTIVSTSGGGQSSSDTTQSTSPSVAVIQ
Sequences:
>Translated_232_residues MARIGVYRKLAYSGIAVAMFAGMNSSAFAAACLGPANLTSVDVSGFTANPAVLLDMSDPLILSSRVRALVGTSNDALSPV IEQAKAATAAQMAAIGSGLGRAANSCQVSDPQFKLAIEKAVADAASADPNLAPLLAAFAKVLAEGGTAALGPGGAAAAAS GIGNTGSIGQTGPGSDDGTPYDGAATTAGTLKVSNASDDSSSTTTTIVSTSGGGQSSSDTTQSTSPSVAVIQ >Mature_231_residues ARIGVYRKLAYSGIAVAMFAGMNSSAFAAACLGPANLTSVDVSGFTANPAVLLDMSDPLILSSRVRALVGTSNDALSPVI EQAKAATAAQMAAIGSGLGRAANSCQVSDPQFKLAIEKAVADAASADPNLAPLLAAFAKVLAEGGTAALGPGGAAAAASG IGNTGSIGQTGPGSDDGTPYDGAATTAGTLKVSNASDDSSSTTTTIVSTSGGGQSSSDTTQSTSPSVAVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22374; Mature: 22243
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIGVYRKLAYSGIAVAMFAGMNSSAFAAACLGPANLTSVDVSGFTANPAVLLDMSDPL CCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCC ILSSRVRALVGTSNDALSPVIEQAKAATAAQMAAIGSGLGRAANSCQVSDPQFKLAIEKA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VADAASADPNLAPLLAAFAKVLAEGGTAALGPGGAAAAASGIGNTGSIGQTGPGSDDGTP HHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC YDGAATTAGTLKVSNASDDSSSTTTTIVSTSGGGQSSSDTTQSTSPSVAVIQ CCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure ARIGVYRKLAYSGIAVAMFAGMNSSAFAAACLGPANLTSVDVSGFTANPAVLLDMSDPL CCCHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCC ILSSRVRALVGTSNDALSPVIEQAKAATAAQMAAIGSGLGRAANSCQVSDPQFKLAIEKA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VADAASADPNLAPLLAAFAKVLAEGGTAALGPGGAAAAASGIGNTGSIGQTGPGSDDGTP HHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC YDGAATTAGTLKVSNASDDSSSTTTTIVSTSGGGQSSSDTTQSTSPSVAVIQ CCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA