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The map label for this gene is bexD [H]

Identifier: 209550560

GI number: 209550560

Start: 3047014

End: 3048225

Strand: Reverse

Name: bexD [H]

Synonym: Rleg2_2984

Alternate gene names: 209550560

Gene position: 3048225-3047014 (Counterclockwise)

Preceding gene: 209550561

Following gene: 209550559

Centisome position: 67.17

GC content: 56.77

Gene sequence:

>1212_bases
ATGGGTTGTTCTCGTATCGGTAGTACACGCGTCGCCATTGTTGTAGCGCTAACCACTATATTGGCAAGCTGCACATCGTT
GCCAAGATCCGGTCCCGATCACAAAGATGTTGATCGAGATGCCGCAGTGAAAGTGACAACGAAGGAGCGTCGCGTCGGCA
TCGACTACGCCCTGATCGATCTCAGCAAGAACGTTCTGCCCTATTTTACCTCTCCCCAGCCGACGTCCTTCAAGGGGTTT
GGCGGCGGTCGTGGTGGAGCGCCTGAAATTCCGCTTGGTTATGGCGACGTCGTCCAGGTTGCCATCTTCGAAGCTCAGTC
CGGCGGTCTCTTCATTCCGTCCGATGCCGGCAGCCGACCCGGCAATTACATTTCCCTGCCAGAGCAGACCATCGATAGAA
ACGGGACGATTACGATTCCGTATGCGGGTCGGGTTCCGGCTGCCGGTCGCTTGAAGGAGACCGTCGAGCAGGACGTCGAG
GATCGCCTGGCGAGCCGCGCGATCGAGCCGCAGGTGGTTATTACCACAACGTCGAGCCGCTCCAGTCAGGTTGCCGTGCT
CGGTGATGTCAATAATCCCCAGCGCGTCGAGATCAGCCCGGCCGGCGAGCGTGTTCTCGATGTCATTTCAGCCGCGGGCG
GTTTGACGACAAATAATATCGAAACGAATGTGACGTTGCAGCGTCGCGGCAAGACGGCGACCGTCGCCTACAATACGCTG
TTGAAGAACCCGGCGGAAAATATCTATGTTGCGCCTGACGATACAATCTCGATTGATCATGAGCGCCGCACCTATCTTGC
GCTCGGCGCCGCAGGCGTCAGCGGCCGCTTCGATTTCGAAGAGTCTAACCTGACACTTGGAGAGGCAATCGCTAAAGCGG
GCGGCCTGCGCGACGACCGCGCCGATCCTGCTCAGGTCCTGCTCTATCGCCTTGTTCCGAAGAAAACGGTTGAGGCGATG
CACGTCGACACGACGAGATTTGCAGGTGATGCGGTTCCGGTGATCGTCCGCGCGAATATGCGCGATCCGGCAACCTTGTT
CGCCGTTCAGCAATTCAAGATGGAAGACAAGGACATTATCTATATTTCCAATTCGGACTCGGTTGAATTGGTCAAGTTCC
TTGACATCGTAAACTCGGTATCGTCCACTGTTTCCGGTGTGACGGACGACGCGCGTGATACTCGCAACGCGGTCCAAGAT
CTCGGAAATTGA

Upstream 100 bases:

>100_bases
GGGAATGTTAATCGGCTTTCAGTGTTATTGATCGGGGTTTGTCTTGTATTTTGTCAGATTGCGGGGCAGTAGCTTCAGGG
GCGTCAACACAGGTTATTCT

Downstream 100 bases:

>100_bases
TTGAAATAGGCAAGCCGGCATCGATCGCGAGTCATCGATGCCGGCGGCCTATATAGCGGATTTGATGAAGGACTATGTTA
TGGCAAGAATTGGTGTTTAT

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MGCSRIGSTRVAIVVALTTILASCTSLPRSGPDHKDVDRDAAVKVTTKERRVGIDYALIDLSKNVLPYFTSPQPTSFKGF
GGGRGGAPEIPLGYGDVVQVAIFEAQSGGLFIPSDAGSRPGNYISLPEQTIDRNGTITIPYAGRVPAAGRLKETVEQDVE
DRLASRAIEPQVVITTTSSRSSQVAVLGDVNNPQRVEISPAGERVLDVISAAGGLTTNNIETNVTLQRRGKTATVAYNTL
LKNPAENIYVAPDDTISIDHERRTYLALGAAGVSGRFDFEESNLTLGEAIAKAGGLRDDRADPAQVLLYRLVPKKTVEAM
HVDTTRFAGDAVPVIVRANMRDPATLFAVQQFKMEDKDIIYISNSDSVELVKFLDIVNSVSSTVSGVTDDARDTRNAVQD
LGN

Sequences:

>Translated_403_residues
MGCSRIGSTRVAIVVALTTILASCTSLPRSGPDHKDVDRDAAVKVTTKERRVGIDYALIDLSKNVLPYFTSPQPTSFKGF
GGGRGGAPEIPLGYGDVVQVAIFEAQSGGLFIPSDAGSRPGNYISLPEQTIDRNGTITIPYAGRVPAAGRLKETVEQDVE
DRLASRAIEPQVVITTTSSRSSQVAVLGDVNNPQRVEISPAGERVLDVISAAGGLTTNNIETNVTLQRRGKTATVAYNTL
LKNPAENIYVAPDDTISIDHERRTYLALGAAGVSGRFDFEESNLTLGEAIAKAGGLRDDRADPAQVLLYRLVPKKTVEAM
HVDTTRFAGDAVPVIVRANMRDPATLFAVQQFKMEDKDIIYISNSDSVELVKFLDIVNSVSSTVSGVTDDARDTRNAVQD
LGN
>Mature_402_residues
GCSRIGSTRVAIVVALTTILASCTSLPRSGPDHKDVDRDAAVKVTTKERRVGIDYALIDLSKNVLPYFTSPQPTSFKGFG
GGRGGAPEIPLGYGDVVQVAIFEAQSGGLFIPSDAGSRPGNYISLPEQTIDRNGTITIPYAGRVPAAGRLKETVEQDVED
RLASRAIEPQVVITTTSSRSSQVAVLGDVNNPQRVEISPAGERVLDVISAAGGLTTNNIETNVTLQRRGKTATVAYNTLL
KNPAENIYVAPDDTISIDHERRTYLALGAAGVSGRFDFEESNLTLGEAIAKAGGLRDDRADPAQVLLYRLVPKKTVEAMH
VDTTRFAGDAVPVIVRANMRDPATLFAVQQFKMEDKDIIYISNSDSVELVKFLDIVNSVSSTVSGVTDDARDTRNAVQDL
GN

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=313, Percent_Identity=25.2396166134185, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788376, Length=321, Percent_Identity=23.98753894081, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 43105; Mature: 42974

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCSRIGSTRVAIVVALTTILASCTSLPRSGPDHKDVDRDAAVKVTTKERRVGIDYALID
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCCCEEEEEE
LSKNVLPYFTSPQPTSFKGFGGGRGGAPEIPLGYGDVVQVAIFEAQSGGLFIPSDAGSRP
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCC
GNYISLPEQTIDRNGTITIPYAGRVPAAGRLKETVEQDVEDRLASRAIEPQVVITTTSSR
CCEEECCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
SSQVAVLGDVNNPQRVEISPAGERVLDVISAAGGLTTNNIETNVTLQRRGKTATVAYNTL
CCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCEECCEEEEEEEEECCCEEEEEHHHH
LKNPAENIYVAPDDTISIDHERRTYLALGAAGVSGRFDFEESNLTLGEAIAKAGGLRDDR
HCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHCCCCCCC
ADPAQVLLYRLVPKKTVEAMHVDTTRFAGDAVPVIVRANMRDPATLFAVQQFKMEDKDII
CCHHHHHHHHHCCHHHHHHEECCCHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEE
YISNSDSVELVKFLDIVNSVSSTVSGVTDDARDTRNAVQDLGN
EEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GCSRIGSTRVAIVVALTTILASCTSLPRSGPDHKDVDRDAAVKVTTKERRVGIDYALID
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCCCEEEEEE
LSKNVLPYFTSPQPTSFKGFGGGRGGAPEIPLGYGDVVQVAIFEAQSGGLFIPSDAGSRP
CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCC
GNYISLPEQTIDRNGTITIPYAGRVPAAGRLKETVEQDVEDRLASRAIEPQVVITTTSSR
CCEEECCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
SSQVAVLGDVNNPQRVEISPAGERVLDVISAAGGLTTNNIETNVTLQRRGKTATVAYNTL
CCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCEECCEEEEEEEEECCCEEEEEHHHH
LKNPAENIYVAPDDTISIDHERRTYLALGAAGVSGRFDFEESNLTLGEAIAKAGGLRDDR
HCCCCCCEEECCCCCEEECCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHCCCCCCC
ADPAQVLLYRLVPKKTVEAMHVDTTRFAGDAVPVIVRANMRDPATLFAVQQFKMEDKDII
CCHHHHHHHHHCCHHHHHHEECCCHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEE
YISNSDSVELVKFLDIVNSVSSTVSGVTDDARDTRNAVQDLGN
EEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]