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The map label for this gene is ynbD [H]

Identifier: 209550454

GI number: 209550454

Start: 2926875

End: 2928218

Strand: Reverse

Name: ynbD [H]

Synonym: Rleg2_2877

Alternate gene names: 209550454

Gene position: 2928218-2926875 (Counterclockwise)

Preceding gene: 209550455

Following gene: 209550453

Centisome position: 64.53

GC content: 62.95

Gene sequence:

>1344_bases
GTGAGGGCAAAGCCGTTGGGGCAGGCACGTTCAACGCTTTCTGAGGCAGCGCCGGTCCTGAGGCGGGCAGCGCTCTGGCT
CGTCTTCCTGGCGCCGTTCTTCTATCTGACTTATGGCGGCGCCAATTGGGTGGCGTCGCAACGCGCTGATGTGCCGAACA
TTGCCTTCGCATGGGAAAGCGCCATTCCGTTCTTCGCGTGGACGATCATTCCCTATTGGTCGATCAATCTGTTCTACGCA
CTCTGCCTGTTCATCAACACGACGCCGCGCGATGTGGATAGGCTCGCGAGGCGTTATCTGACGATCCAGCTAGTAGCCGT
CGCCTGCTTTGTCGCGTTTCCGCTCGAAGCAACCTTCGTGCGGCCGGCCACGAGCGGCCTGCCCGGTTTCATGTTCGCCG
TCCTCGGTGGCTTCGATAAGCCGTTCAACCAGGCGCCGTCGCTGCATATCGCGCTCCTGGTGGTGATCTGGGACCATCTG
CGCGGCCGGCTGTCGCGGAAGGGGCGGCTTCTCTGGCACTTCTGGTGCTTCCTGATTGGCGCCTCGGTGATGACGACGTG
GCAGCATCAGGTCATGGACATACCGACCGGCATGCTGCTCGGTCTGTTCGCCGCCTGGCTTTTCCCGCGCGATGCCGGTT
CGCCTCTTGCGAATTTTGCTTTGAGCGGCGATCCGAAGTCGCGCCGTCTTGGCGTCTACTATCTGTGCGGCGCCCTCGCA
TGTCTCGGCCTTGCAGTGCTCTGCACGCCTCTATCGGCCGCAGCGCTTCTGTTGCTGTGGCCGGCCGTTGCGCTGGCGAT
CGTCGCAGTCGGATATTTCGGCGCCGGTCCGCAGATATTCCTGAAACGCAGCGATGGCCGGGCCGCGTTTGCCAGCCGCT
GGCTACTGGCGCCCTACCGGCTCGGCGCTGTCATCAACGTTTGGCTCTGGACCCGAAAAATGCCGGCATCCGTGGCGATC
GCCGATGGTGTCCATCTTGGTCGTTTTCCGCGTCGCCACGAGGCCAACCGTTTTGCCACGGTGATCGACATTACCGGCGA
ACTTCAGCGGCCGAGCGGGACGCTTGCGGGCTGGTCCAGCTTTCCAACCCTTGATCTGACCGGTCTCGACAAGATCCAGA
CCCGAGCTGCGGCGAACCTTATCGAGGTTGCGCGCCAGCAGGGACCGGTCCTCGTCTGCTGTGCGTTGGGTTTCCAGCGG
AGCGCCGGCGTCATCGTGCGCTGGCTGCTCATTAGCCGACGTTGCGACAATCCAGCCGAAGCGCTGCGGCTGATCGAACG
GGCGGGGTGGCGTGTTTATCTGCCCGTGGAAAGTCTCCATGCCGTGGCGGAGGGCTTGCAATGA

Upstream 100 bases:

>100_bases
AAGAAGAAATGGACCAGCTGATCGCCGCCGCCGGCTTCCGCAAGATCGAACAACGGATCGACCAGTGGGGCATTTTCACC
GTCTCGCTGGCGGAGAGAGT

Downstream 100 bases:

>100_bases
CGCAGTGGAATAGCACGGCCTCGGCGGCCGCGCGAAATCTCGGCCGCAATGCGATCTTCTGCGGGCTGACGGCGTTGTTG
CCACTGATTGTCGGCCCGAT

Product: phosphatase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRAKPLGQARSTLSEAAPVLRRAALWLVFLAPFFYLTYGGANWVASQRADVPNIAFAWESAIPFFAWTIIPYWSINLFYA
LCLFINTTPRDVDRLARRYLTIQLVAVACFVAFPLEATFVRPATSGLPGFMFAVLGGFDKPFNQAPSLHIALLVVIWDHL
RGRLSRKGRLLWHFWCFLIGASVMTTWQHQVMDIPTGMLLGLFAAWLFPRDAGSPLANFALSGDPKSRRLGVYYLCGALA
CLGLAVLCTPLSAAALLLLWPAVALAIVAVGYFGAGPQIFLKRSDGRAAFASRWLLAPYRLGAVINVWLWTRKMPASVAI
ADGVHLGRFPRRHEANRFATVIDITGELQRPSGTLAGWSSFPTLDLTGLDKIQTRAAANLIEVARQQGPVLVCCALGFQR
SAGVIVRWLLISRRCDNPAEALRLIERAGWRVYLPVESLHAVAEGLQ

Sequences:

>Translated_447_residues
MRAKPLGQARSTLSEAAPVLRRAALWLVFLAPFFYLTYGGANWVASQRADVPNIAFAWESAIPFFAWTIIPYWSINLFYA
LCLFINTTPRDVDRLARRYLTIQLVAVACFVAFPLEATFVRPATSGLPGFMFAVLGGFDKPFNQAPSLHIALLVVIWDHL
RGRLSRKGRLLWHFWCFLIGASVMTTWQHQVMDIPTGMLLGLFAAWLFPRDAGSPLANFALSGDPKSRRLGVYYLCGALA
CLGLAVLCTPLSAAALLLLWPAVALAIVAVGYFGAGPQIFLKRSDGRAAFASRWLLAPYRLGAVINVWLWTRKMPASVAI
ADGVHLGRFPRRHEANRFATVIDITGELQRPSGTLAGWSSFPTLDLTGLDKIQTRAAANLIEVARQQGPVLVCCALGFQR
SAGVIVRWLLISRRCDNPAEALRLIERAGWRVYLPVESLHAVAEGLQ
>Mature_447_residues
MRAKPLGQARSTLSEAAPVLRRAALWLVFLAPFFYLTYGGANWVASQRADVPNIAFAWESAIPFFAWTIIPYWSINLFYA
LCLFINTTPRDVDRLARRYLTIQLVAVACFVAFPLEATFVRPATSGLPGFMFAVLGGFDKPFNQAPSLHIALLVVIWDHL
RGRLSRKGRLLWHFWCFLIGASVMTTWQHQVMDIPTGMLLGLFAAWLFPRDAGSPLANFALSGDPKSRRLGVYYLCGALA
CLGLAVLCTPLSAAALLLLWPAVALAIVAVGYFGAGPQIFLKRSDGRAAFASRWLLAPYRLGAVINVWLWTRKMPASVAI
ADGVHLGRFPRRHEANRFATVIDITGELQRPSGTLAGWSSFPTLDLTGLDKIQTRAAANLIEVARQQGPVLVCCALGFQR
SAGVIVRWLLISRRCDNPAEALRLIERAGWRVYLPVESLHAVAEGLQ

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

Organism=Escherichia coli, GI1787679, Length=398, Percent_Identity=35.929648241206, Blast_Score=233, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR000340
- InterPro:   IPR020422
- InterPro:   IPR000326
- InterPro:   IPR016130 [H]

Pfam domain/function: PF00782 DSPc; PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 49304; Mature: 49304

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCEEEECHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHCCCEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]