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The map label for this gene is ynbC [H]

Identifier: 209550455

GI number: 209550455

Start: 2928215

End: 2929999

Strand: Reverse

Name: ynbC [H]

Synonym: Rleg2_2878

Alternate gene names: 209550455

Gene position: 2929999-2928215 (Counterclockwise)

Preceding gene: 209550460

Following gene: 209550454

Centisome position: 64.57

GC content: 63.42

Gene sequence:

>1785_bases
GTGCTGCAAGCTGCCGATAGTGGGCATTCGTCATCGACGGCCAGACCAATGCATGAATCCGAATTTGTCTCGCATGATGG
CACACGGCTCTTTTATCGGATGTGGCCTGCGACGGGTGCTGCACCTAAGGGCGCAATCGTCCTTCTCCATCGCGGCCACG
AGCATAGCGGCCGCGTCGCCCATCTCGCCACCGAGCTCGGCCTCGATGATTTTGCCTTCTACGCCTGGGACGCGCGCGGC
CACGGGCGTTCACCGGGGGAGCGCGGCTATTCGCCATCCTTTGCCGCCTCGGCGCATGATCTCGATTGCTTCGTCCGCCA
TGTCAGCGAGACAAGCGGTACTGCCGTCGACGACGTCGCTGTCATTGCGCAGAGCGTCGGCGCGGTTCTCGCCACCACCT
GGGTGCACGACTACGCGCCGCCGATCCGTGCGCTCGTGCTGGCCTCGCCGGCCTTCAGCGTCAAGCTCTACGTGCCTTTT
GCCAAAGAGGGCATTGCGCTCTGGGAAAGGCTCAAGGGGACATTCTTCGTCAATTCCTATGTCAAGGCGAGGTTTCTGAC
ACATGACCCCGAGCGCATCGCCTCCTACGAATCCGACCCGTTGATCACCCGGCCGATTGCCTCCAACATCCTGTTGCAGC
TCTATGAGGTGGCAGCCCGCGTCGTCGGCGACGCCCGCGCCATCACCGTTCCGACCCAGCTGCTGATCTCCGGCAGCGAC
TGGGTGGTGCGACACGCGCCGCAGCACCGGTTTTACGAAAACCTCGGCAGCCGGATCAAGGAACGGCATGTGCTTGCCGG
CTTCTACCATGACACACTTGGCGAAAAGGACCGTGCGATTGCCTTGGCCGAGATCCGCCGTTTTATCGATGCGCGTTTCG
CCGAGCCCCGGGCGCCTGCCGACCTTCGCACCGCCCATATCCAGGGCTATACAAAGGATGAGGCGGACAGGCTCGCGAGC
CCACTGGACGCCGCATCCCCACGCGGTATTTACTGGGCGCTCAGCCGCCTCAACATCAGGCTCGGGGCACTGGTGTCCGA
AGGCATACGGACCGGGGTCGAGACCGGTTTTGATTCCGGCTCAACGCTCGATTATGTCTACGAGGACAAGCCGCGGGGGC
TCGGTCCCGGCGGACGGTTGATCGACAAGGTGTTCCTTGAGGCGATCGGCTGGCGCGGCATCAGGCAGCGCAAGCTGCAC
TTGCAGGAGCTGATCGACCGCGCGCTGCAGCGCCTGAAAGCAGCCGGGCGCAGTACCCACATGCTCGATATAGCCGCCGG
GCACGGCCGTTATGTCCTTGATGCGATCGAGGCGGCCGCCGTGCGTCCCGACAGTGCGCGGCTGCAGGATTATTCCCCCA
TCAACGTCGACGCCGGCCGCAACAGCATCGCTGCGCGGGGACTGGGTGATTTCGTAAGCTTCCGCCAGCAGGATGCCTTT
GACGGCGAGGGGTTGGCTTCAATCACGCCGGCTCCGGATCTCGCAATCGTCTCCGGCCTGTATGAATTGTTTTCCGACAA
TGCGATGATCGCCGCTTCGCTCGATGGGATTGCCCGCGCGATGCAGCCCGGCGGGCTGCTCATCTACACCAACCAGCCAT
GGCATCCGCAACTGGAGATGATCGCCCGTGCTCTGACCTCCCATCGCGGCGGCCAGGCGTGGGTGATGCGGCGGCGGACG
CAAGAAGAAATGGACCAGCTGATCGCCGCCGCCGGCTTCCGCAAGATCGAACAACGGATCGACCAGTGGGGCATTTTCAC
CGTCTCGCTGGCGGAGAGAGTGTGA

Upstream 100 bases:

>100_bases
CGCATAGGACTTACATTTGCGACTAGACTTTTGCAATGAATGCAAATCACTGTTCCGCTAATGGTTGCAACTTATCCATC
GATCAGAACTGGAGAAGACC

Downstream 100 bases:

>100_bases
GGGCAAAGCCGTTGGGGCAGGCACGTTCAACGCTTTCTGAGGCAGCGCCGGTCCTGAGGCGGGCAGCGCTCTGGCTCGTC
TTCCTGGCGCCGTTCTTCTA

Product: type 12 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MLQAADSGHSSSTARPMHESEFVSHDGTRLFYRMWPATGAAPKGAIVLLHRGHEHSGRVAHLATELGLDDFAFYAWDARG
HGRSPGERGYSPSFAASAHDLDCFVRHVSETSGTAVDDVAVIAQSVGAVLATTWVHDYAPPIRALVLASPAFSVKLYVPF
AKEGIALWERLKGTFFVNSYVKARFLTHDPERIASYESDPLITRPIASNILLQLYEVAARVVGDARAITVPTQLLISGSD
WVVRHAPQHRFYENLGSRIKERHVLAGFYHDTLGEKDRAIALAEIRRFIDARFAEPRAPADLRTAHIQGYTKDEADRLAS
PLDAASPRGIYWALSRLNIRLGALVSEGIRTGVETGFDSGSTLDYVYEDKPRGLGPGGRLIDKVFLEAIGWRGIRQRKLH
LQELIDRALQRLKAAGRSTHMLDIAAGHGRYVLDAIEAAAVRPDSARLQDYSPINVDAGRNSIAARGLGDFVSFRQQDAF
DGEGLASITPAPDLAIVSGLYELFSDNAMIAASLDGIARAMQPGGLLIYTNQPWHPQLEMIARALTSHRGGQAWVMRRRT
QEEMDQLIAAAGFRKIEQRIDQWGIFTVSLAERV

Sequences:

>Translated_594_residues
MLQAADSGHSSSTARPMHESEFVSHDGTRLFYRMWPATGAAPKGAIVLLHRGHEHSGRVAHLATELGLDDFAFYAWDARG
HGRSPGERGYSPSFAASAHDLDCFVRHVSETSGTAVDDVAVIAQSVGAVLATTWVHDYAPPIRALVLASPAFSVKLYVPF
AKEGIALWERLKGTFFVNSYVKARFLTHDPERIASYESDPLITRPIASNILLQLYEVAARVVGDARAITVPTQLLISGSD
WVVRHAPQHRFYENLGSRIKERHVLAGFYHDTLGEKDRAIALAEIRRFIDARFAEPRAPADLRTAHIQGYTKDEADRLAS
PLDAASPRGIYWALSRLNIRLGALVSEGIRTGVETGFDSGSTLDYVYEDKPRGLGPGGRLIDKVFLEAIGWRGIRQRKLH
LQELIDRALQRLKAAGRSTHMLDIAAGHGRYVLDAIEAAAVRPDSARLQDYSPINVDAGRNSIAARGLGDFVSFRQQDAF
DGEGLASITPAPDLAIVSGLYELFSDNAMIAASLDGIARAMQPGGLLIYTNQPWHPQLEMIARALTSHRGGQAWVMRRRT
QEEMDQLIAAAGFRKIEQRIDQWGIFTVSLAERV
>Mature_594_residues
MLQAADSGHSSSTARPMHESEFVSHDGTRLFYRMWPATGAAPKGAIVLLHRGHEHSGRVAHLATELGLDDFAFYAWDARG
HGRSPGERGYSPSFAASAHDLDCFVRHVSETSGTAVDDVAVIAQSVGAVLATTWVHDYAPPIRALVLASPAFSVKLYVPF
AKEGIALWERLKGTFFVNSYVKARFLTHDPERIASYESDPLITRPIASNILLQLYEVAARVVGDARAITVPTQLLISGSD
WVVRHAPQHRFYENLGSRIKERHVLAGFYHDTLGEKDRAIALAEIRRFIDARFAEPRAPADLRTAHIQGYTKDEADRLAS
PLDAASPRGIYWALSRLNIRLGALVSEGIRTGVETGFDSGSTLDYVYEDKPRGLGPGGRLIDKVFLEAIGWRGIRQRKLH
LQELIDRALQRLKAAGRSTHMLDIAAGHGRYVLDAIEAAAVRPDSARLQDYSPINVDAGRNSIAARGLGDFVSFRQQDAF
DGEGLASITPAPDLAIVSGLYELFSDNAMIAASLDGIARAMQPGGLLIYTNQPWHPQLEMIARALTSHRGGQAWVMRRRT
QEEMDQLIAAAGFRKIEQRIDQWGIFTVSLAERV

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=261, Percent_Identity=28.735632183908, Blast_Score=70, Evalue=8e-12,
Organism=Homo sapiens, GI6005786, Length=261, Percent_Identity=28.735632183908, Blast_Score=70, Evalue=8e-12,
Organism=Escherichia coli, GI1787678, Length=575, Percent_Identity=55.6521739130435, Blast_Score=636, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 65366; Mature: 65366

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQAADSGHSSSTARPMHESEFVSHDGTRLFYRMWPATGAAPKGAIVLLHRGHEHSGRVA
CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHH
HLATELGLDDFAFYAWDARGHGRSPGERGYSPSFAASAHDLDCFVRHVSETSGTAVDDVA
HHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
VIAQSVGAVLATTWVHDYAPPIRALVLASPAFSVKLYVPFAKEGIALWERLKGTFFVNSY
HHHHHHHHHHHHHHHHHCCCHHHHHHEECCCEEEEEEECCHHHHHHHHHHHCCCEEEEHH
VKARFLTHDPERIASYESDPLITRPIASNILLQLYEVAARVVGDARAITVPTQLLISGSD
HHHHHCCCCHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCC
WVVRHAPQHRFYENLGSRIKERHVLAGFYHDTLGEKDRAIALAEIRRFIDARFAEPRAPA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DLRTAHIQGYTKDEADRLASPLDAASPRGIYWALSRLNIRLGALVSEGIRTGVETGFDSG
CHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
STLDYVYEDKPRGLGPGGRLIDKVFLEAIGWRGIRQRKLHLQELIDRALQRLKAAGRSTH
CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
MLDIAAGHGRYVLDAIEAAAVRPDSARLQDYSPINVDAGRNSIAARGLGDFVSFRQQDAF
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCC
DGEGLASITPAPDLAIVSGLYELFSDNAMIAASLDGIARAMQPGGLLIYTNQPWHPQLEM
CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCEEEECCCCCCHHHHH
IARALTSHRGGQAWVMRRRTQEEMDQLIAAAGFRKIEQRIDQWGIFTVSLAERV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCC
>Mature Secondary Structure
MLQAADSGHSSSTARPMHESEFVSHDGTRLFYRMWPATGAAPKGAIVLLHRGHEHSGRVA
CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHH
HLATELGLDDFAFYAWDARGHGRSPGERGYSPSFAASAHDLDCFVRHVSETSGTAVDDVA
HHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
VIAQSVGAVLATTWVHDYAPPIRALVLASPAFSVKLYVPFAKEGIALWERLKGTFFVNSY
HHHHHHHHHHHHHHHHHCCCHHHHHHEECCCEEEEEEECCHHHHHHHHHHHCCCEEEEHH
VKARFLTHDPERIASYESDPLITRPIASNILLQLYEVAARVVGDARAITVPTQLLISGSD
HHHHHCCCCHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCC
WVVRHAPQHRFYENLGSRIKERHVLAGFYHDTLGEKDRAIALAEIRRFIDARFAEPRAPA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DLRTAHIQGYTKDEADRLASPLDAASPRGIYWALSRLNIRLGALVSEGIRTGVETGFDSG
CHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
STLDYVYEDKPRGLGPGGRLIDKVFLEAIGWRGIRQRKLHLQELIDRALQRLKAAGRSTH
CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
MLDIAAGHGRYVLDAIEAAAVRPDSARLQDYSPINVDAGRNSIAARGLGDFVSFRQQDAF
EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCC
DGEGLASITPAPDLAIVSGLYELFSDNAMIAASLDGIARAMQPGGLLIYTNQPWHPQLEM
CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCEEEECCCCCCHHHHH
IARALTSHRGGQAWVMRRRTQEEMDQLIAAAGFRKIEQRIDQWGIFTVSLAERV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]