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The map label for this gene is nudL [H]

Identifier: 209550369

GI number: 209550369

Start: 2833804

End: 2834454

Strand: Reverse

Name: nudL [H]

Synonym: Rleg2_2790

Alternate gene names: 209550369

Gene position: 2834454-2833804 (Counterclockwise)

Preceding gene: 209550370

Following gene: 209550368

Centisome position: 62.46

GC content: 63.13

Gene sequence:

>651_bases
ATGAATGATGCGATCACCCACCGTTATCCGCTGTTCTCCGCAGCCGAATTCCGCCGCCGCGCGCTCAACCAGAATGGCGG
GCCGGTCGACCATGCCTGGCGCGATCACGGCGACCATGTCCTCAATCCCGAAATCGTCGCCGAGGTCGAGACCTTCAAGC
TGCGCGACGCTGCCGTGCTCGTGCCCGTCGTCGATGCCGGTGACGAGGCGCATGTGATCTTTACCAAGCGCACGGCGACG
CTGCGCAAACATTCCGGGCAGATCGCCTTTCCCGGCGGCTCGATCGATCCCGCTGATATCTCACCTGAGATGGCGGCAAT
CCGCGAGACGGAGGAGGAGATCGGTCTTTCCGGTTCCTTCGTCGAGACCGTTGGGCGGCTGCCGAACTATCTTGCCTCGA
CCGGCTTCCGCATCACACCGGTGCTCGGCGTCGTCTCGCGGGGCTTCGCGCTCACCCTGAACCCGGCCGAGGTGGCCGAC
GTGTTCGAGGTGCCGCTTTCCTTCCTGATGGACCCTGCCAATCACGCCCGCGACAGGCGCGTCATCGACGGCATCGACCG
GCATTTCTACCGGATGCCCTATGAAACCAGAATGATCTGGGGCATCACCGCCGGCATCGTCCGCACGCTTTACGAAAGGC
TTTATGCATGA

Upstream 100 bases:

>100_bases
GCGAGATCCTCGACGTGCAGGGACGGGCGATGTTTGCGATCCGCTCCGCCGGCGAAGTTTTTCCTGTCATGCCCGCCGAC
GAACTGGATGCTCTTTGCCG

Downstream 100 bases:

>100_bases
CCGGTCTTGCCGACCAAGCATGGTTCCGCGACCCGGCGCTCGGCCGGATCCTGGAACTTCTGAATGCCGATGGCGGGGCC
GATGGTGGCGGGGAGGCGCG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNDAITHRYPLFSAAEFRRRALNQNGGPVDHAWRDHGDHVLNPEIVAEVETFKLRDAAVLVPVVDAGDEAHVIFTKRTAT
LRKHSGQIAFPGGSIDPADISPEMAAIRETEEEIGLSGSFVETVGRLPNYLASTGFRITPVLGVVSRGFALTLNPAEVAD
VFEVPLSFLMDPANHARDRRVIDGIDRHFYRMPYETRMIWGITAGIVRTLYERLYA

Sequences:

>Translated_216_residues
MNDAITHRYPLFSAAEFRRRALNQNGGPVDHAWRDHGDHVLNPEIVAEVETFKLRDAAVLVPVVDAGDEAHVIFTKRTAT
LRKHSGQIAFPGGSIDPADISPEMAAIRETEEEIGLSGSFVETVGRLPNYLASTGFRITPVLGVVSRGFALTLNPAEVAD
VFEVPLSFLMDPANHARDRRVIDGIDRHFYRMPYETRMIWGITAGIVRTLYERLYA
>Mature_216_residues
MNDAITHRYPLFSAAEFRRRALNQNGGPVDHAWRDHGDHVLNPEIVAEVETFKLRDAAVLVPVVDAGDEAHVIFTKRTAT
LRKHSGQIAFPGGSIDPADISPEMAAIRETEEEIGLSGSFVETVGRLPNYLASTGFRITPVLGVVSRGFALTLNPAEVAD
VFEVPLSFLMDPANHARDRRVIDGIDRHFYRMPYETRMIWGITAGIVRTLYERLYA

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=157, Percent_Identity=36.3057324840764, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1788115, Length=172, Percent_Identity=37.7906976744186, Blast_Score=95, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17536993, Length=164, Percent_Identity=31.7073170731707, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17510677, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323180, Length=187, Percent_Identity=28.3422459893048, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI18859683, Length=161, Percent_Identity=37.2670807453416, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 24040; Mature: 24040

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAITHRYPLFSAAEFRRRALNQNGGPVDHAWRDHGDHVLNPEIVAEVETFKLRDAAVL
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHEEECCCEEE
VPVVDAGDEAHVIFTKRTATLRKHSGQIAFPGGSIDPADISPEMAAIRETEEEIGLSGSF
EEEECCCCCEEEEEEECHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
VETVGRLPNYLASTGFRITPVLGVVSRGFALTLNPAEVADVFEVPLSFLMDPANHARDRR
HHHHHHHHHHHHHCCCEEHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHH
VIDGIDRHFYRMPYETRMIWGITAGIVRTLYERLYA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDAITHRYPLFSAAEFRRRALNQNGGPVDHAWRDHGDHVLNPEIVAEVETFKLRDAAVL
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHEEECCCEEE
VPVVDAGDEAHVIFTKRTATLRKHSGQIAFPGGSIDPADISPEMAAIRETEEEIGLSGSF
EEEECCCCCEEEEEEECHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
VETVGRLPNYLASTGFRITPVLGVVSRGFALTLNPAEVADVFEVPLSFLMDPANHARDRR
HHHHHHHHHHHHHCCCEEHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHH
VIDGIDRHFYRMPYETRMIWGITAGIVRTLYERLYA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]