| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is dhfrIII [H]
Identifier: 209550124
GI number: 209550124
Start: 2574338
End: 2574856
Strand: Reverse
Name: dhfrIII [H]
Synonym: Rleg2_2542
Alternate gene names: 209550124
Gene position: 2574856-2574338 (Counterclockwise)
Preceding gene: 209550125
Following gene: 209550123
Centisome position: 56.74
GC content: 65.7
Gene sequence:
>519_bases ATGGCCGATATCCGCAGGACCATTATCGCCGCCGTTGCCCGCAACGGCATCATCGGCCGCGATGGAGACATGCCCTGGCG GCTGTCGAGCGATCTCAAGCGCTTCAAGGCGCTGACATTGGGCAGGCCTGTCGTGATGGGCCGCAAGACCTATGATTCGA TCGGCAAGCCGCTGCCGGGGCGGCCGAACGTCGTCATCTCCAGGCAGGCGGCGATAGACCATCCCGATGTTTCCATGGCG CATTCGCTGCCGGAAGCGATGACGGCGGCCGAAAGGCTGGCGCGCGAAAGCGGCGTCGACGAGGTCTGCATCATCGGCGG CGGTCAGGTCTATGCCCAGGCGATCGGCCTTGCCGACCGGATGTGCATCACCCATGTCGAGGCCGACCTCGACGGAGACG CATCGTTTCCCGCGATCGATCCCGACATCTGGCGGGCAGGGGAGCCTATCGCGGTTCCGGCCGGCGAGAAGGACAGTCAC CCCACGCGCTTCGTCGTCTACGAGCGCCGACACGCCTGA
Upstream 100 bases:
>100_bases AAGGACATCTTCAGCTTCACCTTCGACGATTTCGAGCTGATCGGCTACGAGGCCGATGCCAGCATCAAGGCGCCGATCGC CGTCTGATCCGGGACATTCC
Downstream 100 bases:
>100_bases AAATGAACTATTTTCCAATTAAATTGACCAAGTTTCTCACGTTGCGTTGAAAGCCGCTGCGGCGATACTTATAACGGTCC CAACGCATCCGCCGGTCAGC
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGRPVVMGRKTYDSIGKPLPGRPNVVISRQAAIDHPDVSMA HSLPEAMTAAERLARESGVDEVCIIGGGQVYAQAIGLADRMCITHVEADLDGDASFPAIDPDIWRAGEPIAVPAGEKDSH PTRFVVYERRHA
Sequences:
>Translated_172_residues MADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGRPVVMGRKTYDSIGKPLPGRPNVVISRQAAIDHPDVSMA HSLPEAMTAAERLARESGVDEVCIIGGGQVYAQAIGLADRMCITHVEADLDGDASFPAIDPDIWRAGEPIAVPAGEKDSH PTRFVVYERRHA >Mature_171_residues ADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGRPVVMGRKTYDSIGKPLPGRPNVVISRQAAIDHPDVSMAH SLPEAMTAAERLARESGVDEVCIIGGGQVYAQAIGLADRMCITHVEADLDGDASFPAIDPDIWRAGEPIAVPAGEKDSHP TRFVVYERRHA
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=180, Percent_Identity=30, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1786233, Length=164, Percent_Identity=40.2439024390244, Blast_Score=127, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17505899, Length=149, Percent_Identity=29.5302013422819, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324810, Length=148, Percent_Identity=34.4594594594595, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI116008026, Length=175, Percent_Identity=34.8571428571429, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647458, Length=175, Percent_Identity=34.8571428571429, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18649; Mature: 18517
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGRPVVMGRKTYDSIGKPLPG CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCC RPNVVISRQAAIDHPDVSMAHSLPEAMTAAERLARESGVDEVCIIGGGQVYAQAIGLADR CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH MCITHVEADLDGDASFPAIDPDIWRAGEPIAVPAGEKDSHPTRFVVYERRHA HHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCEEEEEECCCC >Mature Secondary Structure ADIRRTIIAAVARNGIIGRDGDMPWRLSSDLKRFKALTLGRPVVMGRKTYDSIGKPLPG CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHCCCCCC RPNVVISRQAAIDHPDVSMAHSLPEAMTAAERLARESGVDEVCIIGGGQVYAQAIGLADR CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH MCITHVEADLDGDASFPAIDPDIWRAGEPIAVPAGEKDSHPTRFVVYERRHA HHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]