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The map label for this gene is zrp [H]

Identifier: 209550088

GI number: 209550088

Start: 2539620

End: 2540084

Strand: Reverse

Name: zrp [H]

Synonym: Rleg2_2505

Alternate gene names: 209550088

Gene position: 2540084-2539620 (Counterclockwise)

Preceding gene: 209550093

Following gene: 209550087

Centisome position: 55.97

GC content: 57.42

Gene sequence:

>465_bases
ATGCTTGATGATCGTGACAGACGCATTCTCGATATGCTGCAGAAAGATGCAGGCATATCCGTGACCGATCTGGCCGAGTA
CGTGGCGTTGTCGGTCTCGGCCTGCTCGCGTCGCATCCAGCGGCTGGAGGAAAGCGGCCATATCCTTCGGCGCATCATCG
TGCTCGACCGGGAAAGGATGGGCGTGCCGACGACGGTCTTCGCGCTCGTCAAGACGGCACACCATTCCGACGAATGGACG
GAAACCTTCCGCAGGATCATCAGCGACATCCCCGAGATCGTCGAGGCGCACCGGTTGACCGGCAATCACGATTACATTCT
GAAGATCGTGCTGCCGCGCGTCGAGCATTACGATGTCATCTACAAGCAGATCGTGCGCAAGCTGGAACTCTTCGATGTCT
CGGCGTCGATCTCGATGGAAGAGTTGAAACATGGAATGGCGATACCCGTGGGCTATGCCCGATAA

Upstream 100 bases:

>100_bases
TGTGTTTGCGTTGTTTGTCTTCCATATCAAATATCTGATATGGTTTTGCGCAGTTTCCAAAAATCATGCAAAAATCGGGC
GGAGGATTCCCTTAAGGCAC

Downstream 100 bases:

>100_bases
AACGGCATTTCGAGAGGCTGCGATAATATGAGCAACAGCGATATTCATAGCTATTTTCTGCCAGGGGAAAAACTTCTTTG
GTCCAGGCGTCCCGCACAGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: Global regulatory protein [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLDDRDRRILDMLQKDAGISVTDLAEYVALSVSACSRRIQRLEESGHILRRIIVLDRERMGVPTTVFALVKTAHHSDEWT
ETFRRIISDIPEIVEAHRLTGNHDYILKIVLPRVEHYDVIYKQIVRKLELFDVSASISMEELKHGMAIPVGYAR

Sequences:

>Translated_154_residues
MLDDRDRRILDMLQKDAGISVTDLAEYVALSVSACSRRIQRLEESGHILRRIIVLDRERMGVPTTVFALVKTAHHSDEWT
ETFRRIISDIPEIVEAHRLTGNHDYILKIVLPRVEHYDVIYKQIVRKLELFDVSASISMEELKHGMAIPVGYAR
>Mature_154_residues
MLDDRDRRILDMLQKDAGISVTDLAEYVALSVSACSRRIQRLEESGHILRRIIVLDRERMGVPTTVFALVKTAHHSDEWT
ETFRRIISDIPEIVEAHRLTGNHDYILKIVLPRVEHYDVIYKQIVRKLELFDVSASISMEELKHGMAIPVGYAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=36.4238410596026, Blast_Score=127, Evalue=3e-31,
Organism=Escherichia coli, GI1787116, Length=144, Percent_Identity=31.25, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF09339 HTH_IclR [H]

EC number: NA

Molecular weight: Translated: 17794; Mature: 17794

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDRDRRILDMLQKDAGISVTDLAEYVALSVSACSRRIQRLEESGHILRRIIVLDRERM
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVPTTVFALVKTAHHSDEWTETFRRIISDIPEIVEAHRLTGNHDYILKIVLPRVEHYDVI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHH
YKQIVRKLELFDVSASISMEELKHGMAIPVGYAR
HHHHHHHHHHHHCHHCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLDDRDRRILDMLQKDAGISVTDLAEYVALSVSACSRRIQRLEESGHILRRIIVLDRERM
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVPTTVFALVKTAHHSDEWTETFRRIISDIPEIVEAHRLTGNHDYILKIVLPRVEHYDVI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHH
YKQIVRKLELFDVSASISMEELKHGMAIPVGYAR
HHHHHHHHHHHHCHHCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA