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The map label for this gene is ydeP [H]

Identifier: 209550093

GI number: 209550093

Start: 2544117

End: 2544533

Strand: Reverse

Name: ydeP [H]

Synonym: Rleg2_2510

Alternate gene names: 209550093

Gene position: 2544533-2544117 (Counterclockwise)

Preceding gene: 209550095

Following gene: 209550088

Centisome position: 56.07

GC content: 62.59

Gene sequence:

>417_bases
ATGAGCGGCGCGGTCGTCAGTCTGAAAAACAGGATGCCGGGGGCGCGGCGCGAGATCGATCTTGCCGGCCTTGATTTTTC
CAACTGCCCGGTCAGGGACATGATGCAGCAGATCGGCGGAAAATGGTCGACGCTGCTGCTCGAAGTGCTGGCGGCGGAGC
CCCGTCGGTTCGGCGAGCTCAGGCGGATGCTGCCCGATATTTCCCAGCGCATGCTGACACAGACGCTGCGCGACCTGCAG
AGGGACGGTTATATCGCTCGCGAGGTCTTCCCGACCAAACCGCCGAGCGTCGAATATTCCATGACCGAACTCGGCCGCTC
GCTCTACCTGCCGCTGTCGCAACTGTTGAACTGGGCGGAAGCCAACCATGATGCCGTCCGCGCCGCCCGTTCGCGTTTCG
ATTCTGCCGATAGCTAG

Upstream 100 bases:

>100_bases
TAGGTAGTCTCAAAAAGAGAGCAACACTAGAATAGGAATTGACTTGGCGGTGTAAAGGAGGCAGTTTTTCGGCTCTACGT
TACCAAAAGGGAACCAGCTC

Downstream 100 bases:

>100_bases
AGTGTCTTACTTGCCGCGCCCTTCCGTCAGGAACAGCAGGAAGGCGAGCGCCGGGAAGGCGAAGCCGATCCAGGCGGTCA
TCGACCAGCCGCCGGTGGCA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSGAVVSLKNRMPGARREIDLAGLDFSNCPVRDMMQQIGGKWSTLLLEVLAAEPRRFGELRRMLPDISQRMLTQTLRDLQ
RDGYIAREVFPTKPPSVEYSMTELGRSLYLPLSQLLNWAEANHDAVRAARSRFDSADS

Sequences:

>Translated_138_residues
MSGAVVSLKNRMPGARREIDLAGLDFSNCPVRDMMQQIGGKWSTLLLEVLAAEPRRFGELRRMLPDISQRMLTQTLRDLQ
RDGYIAREVFPTKPPSVEYSMTELGRSLYLPLSQLLNWAEANHDAVRAARSRFDSADS
>Mature_137_residues
SGAVVSLKNRMPGARREIDLAGLDFSNCPVRDMMQQIGGKWSTLLLEVLAAEPRRFGELRRMLPDISQRMLTQTLRDLQR
DGYIAREVFPTKPPSVEYSMTELGRSLYLPLSQLLNWAEANHDAVRAARSRFDSADS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=103, Percent_Identity=36.8932038834951, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15625; Mature: 15494

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAVVSLKNRMPGARREIDLAGLDFSNCPVRDMMQQIGGKWSTLLLEVLAAEPRRFGEL
CCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHH
RRMLPDISQRMLTQTLRDLQRDGYIAREVFPTKPPSVEYSMTELGRSLYLPLSQLLNWAE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ANHDAVRAARSRFDSADS
CCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGAVVSLKNRMPGARREIDLAGLDFSNCPVRDMMQQIGGKWSTLLLEVLAAEPRRFGEL
CCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHH
RRMLPDISQRMLTQTLRDLQRDGYIAREVFPTKPPSVEYSMTELGRSLYLPLSQLLNWAE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ANHDAVRAARSRFDSADS
CCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]