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The map label for this gene is yidL [C]

Identifier: 209549938

GI number: 209549938

Start: 2415490

End: 2416314

Strand: Reverse

Name: yidL [C]

Synonym: Rleg2_2354

Alternate gene names: 209549938

Gene position: 2416314-2415490 (Counterclockwise)

Preceding gene: 209549941

Following gene: 209549935

Centisome position: 53.25

GC content: 64.12

Gene sequence:

>825_bases
ATGAGACAGGCCGAGGCCATTTACAGAACGCCGCTTGGCGCGGCCGGCGGACTGGCGGTCACCGGAAGCGGCAGGCAGCA
TGCCCGCCATGCGGTCACCGACCGGAAACTTCCGAGTTTCGCCGTCGTGCTGGTGGAGCGCGGGCAGGGCTGGCTGGAGA
CCGCCGCCAGCGGCCGCCTCAGCCTGACCGGGCCTGCCCTGTTCTGGCTGTTTCCCAACCGCGCGCATTCCTATTCTCCC
GACGAAGACGGCTGGGACGAGCGCTGGGCGCTTTTCGAAGGATCCTTCACGCGGGACTTCGTCAGGCTGAGGATCATTGC
CGAGCGGCATCCCGTCGTCGCCCTGCATCGCCTCGATGACGTGGCACGGCTCTTCGGGACGCTCCATGCCGATCTGCTCG
ACGATACCCATCTGGGACAGGCGTCGGCGGCATTGATGCTGCATCGCATCGTCATATCGGCCGCCAGACAGGCAATTGGA
GCGGCTGAGCGACGCCAGGAAAGGCCCGACATGGCCGTGATTGTGGAAACGCTACGGCGGCGGGCGATGCAACCGCTCGA
CCTCGCCGCCTTTGCCGCCGAGCACCAGATGTCTCCGGCAACATTGCGCCGGCGGTTCACGCTTGAAACGGGGCTGCCGC
CCAAGGCATTTCAACTTCGGGCGCGCATGGACCATGCCAAACAGCTGTTGGCTACCACCGACGAAAAAATCGAAGCGGTT
GCCGCCATGATCGGTCTGGAAGACCCCTTTTATTTTTCACGGGTCTTCCACGAGCGCGAGGGCTGTAGTCCTCGCGAATT
CCGCGCCAGATACAGGCGAATGTGA

Upstream 100 bases:

>100_bases
CATTTCAGCCTTCCCCAGCTTGAATTGAGTTGCCTTTAATTATCTGATCTGCAGGACTAACCGACATAGAGGAAACTGGT
AGCTGGACTTTTCGCTCACC

Downstream 100 bases:

>100_bases
ACGCCCGGTGCTTTGGCCGGAGCGTCAGCGCCAGCCAAGCGCCGGGGCGACGTGGGTCAGAACTGCCTCGATGACATGGG
CGTTGTAGGTGACGCCGAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; AraC-Family Transcriptional Regulator; Two Component Transcriptional Regulator; MmsAB Operon Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRQAEAIYRTPLGAAGGLAVTGSGRQHARHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSP
DEDGWDERWALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLHRIVISAARQAIG
AAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTLETGLPPKAFQLRARMDHAKQLLATTDEKIEAV
AAMIGLEDPFYFSRVFHEREGCSPREFRARYRRM

Sequences:

>Translated_274_residues
MRQAEAIYRTPLGAAGGLAVTGSGRQHARHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSP
DEDGWDERWALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLHRIVISAARQAIG
AAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTLETGLPPKAFQLRARMDHAKQLLATTDEKIEAV
AAMIGLEDPFYFSRVFHEREGCSPREFRARYRRM
>Mature_274_residues
MRQAEAIYRTPLGAAGGLAVTGSGRQHARHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSP
DEDGWDERWALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLHRIVISAARQAIG
AAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTLETGLPPKAFQLRARMDHAKQLLATTDEKIEAV
AAMIGLEDPFYFSRVFHEREGCSPREFRARYRRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510985, Length=235, Percent_Identity=25.1063829787234, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30900; Mature: 30900

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQAEAIYRTPLGAAGGLAVTGSGRQHARHAVTDRKLPSFAVVLVERGQGWLETAASGRL
CCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCE
SLTGPALFWLFPNRAHSYSPDEDGWDERWALFEGSFTRDFVRLRIIAERHPVVALHRLDD
EECCCEEEEECCCCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCEEEHHHHHH
VARLFGTLHADLLDDTHLGQASAALMLHRIVISAARQAIGAAERRQERPDMAVIVETLRR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RAMQPLDLAAFAAEHQMSPATLRRRFTLETGLPPKAFQLRARMDHAKQLLATTDEKIEAV
HCCCCHHHHHHHHHHCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
AAMIGLEDPFYFSRVFHEREGCSPREFRARYRRM
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRQAEAIYRTPLGAAGGLAVTGSGRQHARHAVTDRKLPSFAVVLVERGQGWLETAASGRL
CCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCE
SLTGPALFWLFPNRAHSYSPDEDGWDERWALFEGSFTRDFVRLRIIAERHPVVALHRLDD
EECCCEEEEECCCCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCEEEHHHHHH
VARLFGTLHADLLDDTHLGQASAALMLHRIVISAARQAIGAAERRQERPDMAVIVETLRR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RAMQPLDLAAFAAEHQMSPATLRRRFTLETGLPPKAFQLRARMDHAKQLLATTDEKIEAV
HCCCCHHHHHHHHHHCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
AAMIGLEDPFYFSRVFHEREGCSPREFRARYRRM
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA