| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is resE [H]
Identifier: 209549921
GI number: 209549921
Start: 2397561
End: 2399255
Strand: Reverse
Name: resE [H]
Synonym: Rleg2_2337
Alternate gene names: 209549921
Gene position: 2399255-2397561 (Counterclockwise)
Preceding gene: 209549923
Following gene: 209549920
Centisome position: 52.87
GC content: 61.12
Gene sequence:
>1695_bases TTGAAGGTCAGGCTAACATCCCACATTACATTCGTCTTGGTGACACTCACCTGTGCGGCGGCTGTGTTGCTGTGCGGATT TGCGTGGCTCGCCGCCATTAAGGTAGATGATCTCTCGCTGCGCCGGCAGGCCGACTTTGTCCGGCAGGGACTGGAAGAAC AGATCGCGGCGCTGCCCCGCGAACAGGAAAGCGTCGCCAAATGGGACGACGCCTTCCTTTATGCCAAGCAGCGAAACCAT GAATGGCTGCTCGACAATATCGGCCGGTGGACGAGCCAGTATTTCGGGCATGACCGGACCTATATCTTCGACGATACCAA CCGCTTGATGTTTGCATTCCGCGACGGCGCGGATGCCATGCCGCCGCGGCTTGGCAGCGACGACGGCCGAGAAATGACCA CGCTTGCCGGGGAAATGCGCGCGGTTCTCGTCGAGCAGGCGGCAAAGCCCAGTACCAAACCGCTCGGTCAGCTGGCGACG GTTCGCACGATCATGATCGGCAATCGGCCGGCCATTGTAAGCGCGCGGCCCATTCTGCCGAGCTCGGCCAGAATGCAGAT CGAGGCGGGCCAGGAGTTCATCGCCGTCTCGGTCAAGTTCATCGATGGAAAAGCCGCCGAAAGCATCGCCCATTATGCGC GCCTCGAAGGCTTGCATTTCGCGCCGAAAAGCAAGGACGAACGGGCCCAAGTGCCGGTGTTGTCGCATGACGGCGGCACG ATCGGCTATCTCGTATGGCCGCCGATCCTGCCCGGATTCATGCTCTTTCAACAGATCGCGCCGGCTGGGCTTGGCTGCCT GGCGCTGCTGATCGCTGTCGTCTTCTGGCTCGGACGCGGTCTGCATCGGACCTCGCTGACCCTGCTGGACAGCCAGGCTG AGCTCACCCACCACCGCAACCACCTGGAAGAAATGGTGGCCGATCGAACGGCCGAGATCGAACGGCAGAGGGAGGAGCTG GACCGGCTGTTGGTGCACGAGCGCCAGGTGAATGCGCTCCAGCGCCAGTTCGTCGCCATGGCGTCGCACGAGTTTCGCAC ACCGCTCGCAATCATCGACGCCGCAGCCCAGCGGCTCTGCCGCTCGACCACCAATGTCGGCGGCGACTACGTTCACGAAA AAGCCGGCGTGATCCGCAGCGCGGTGGTGCGCATGGTCGATCTGATGGAGAGCATCCTCGCCAGTGGCCGGCTCGAAACC GGACAGATTACATTGAAGCGGAGCGAGGGCGATCTGAAAGCCTTGCTCGTCACCTGCTGCGACAGACAGCGCCACCTCAG CCGCTCGCATCTGTTCCATCTCGATCTTGAGGCGATACCCGAGGGTTTGACGTTCGACCGCAGCGCGATGGAACAGGTCT TCACCAACCTGATTTCGAACGCCGTCAAATATTCGCCCAATGCGCCTAATATCCATGTTCGCGCCCGGGTTGATGAAAAG ACGCTGGAGATCGCTATCGCCGACAGCGGCATCGGCATGGATGCGGATGATCTGCCGAAGCTGTTTCAACCCTATTACCG CGCCCGCAGCGCGACGGGCATTGCCGGCACCGGCATCGGGCTCAACGTCGTCAAGCAGGTCGTCGAACTGCATGGCGGCA CCGTCGAGGTGACGAGCGAGCTCGGCAAGGGCACAACATTTATCATTCGTCTGCCAATAGGGTCTCTATTGTCGGATCAA CACGTCGCAGCTTAG
Upstream 100 bases:
>100_bases GGAGACATGTCGCGGGGCGCAGGGGAGCGCATAATTCACGGTCCGTCAACCTTTGCGTGTCAATTTCTCGGCAGCGGGCG CCGTCAAAAGGTTGCAGATA
Downstream 100 bases:
>100_bases GGAAAAGCTTATGGTTACAGTCCTGTGCATAGAAGATGAAGTCGAGATCCGGAACCTCCTCGTCGAAGAGTTGACCGAAG CCGGCTACAGGACGCTCGAG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MKVRLTSHITFVLVTLTCAAAVLLCGFAWLAAIKVDDLSLRRQADFVRQGLEEQIAALPREQESVAKWDDAFLYAKQRNH EWLLDNIGRWTSQYFGHDRTYIFDDTNRLMFAFRDGADAMPPRLGSDDGREMTTLAGEMRAVLVEQAAKPSTKPLGQLAT VRTIMIGNRPAIVSARPILPSSARMQIEAGQEFIAVSVKFIDGKAAESIAHYARLEGLHFAPKSKDERAQVPVLSHDGGT IGYLVWPPILPGFMLFQQIAPAGLGCLALLIAVVFWLGRGLHRTSLTLLDSQAELTHHRNHLEEMVADRTAEIERQREEL DRLLVHERQVNALQRQFVAMASHEFRTPLAIIDAAAQRLCRSTTNVGGDYVHEKAGVIRSAVVRMVDLMESILASGRLET GQITLKRSEGDLKALLVTCCDRQRHLSRSHLFHLDLEAIPEGLTFDRSAMEQVFTNLISNAVKYSPNAPNIHVRARVDEK TLEIAIADSGIGMDADDLPKLFQPYYRARSATGIAGTGIGLNVVKQVVELHGGTVEVTSELGKGTTFIIRLPIGSLLSDQ HVAA
Sequences:
>Translated_564_residues MKVRLTSHITFVLVTLTCAAAVLLCGFAWLAAIKVDDLSLRRQADFVRQGLEEQIAALPREQESVAKWDDAFLYAKQRNH EWLLDNIGRWTSQYFGHDRTYIFDDTNRLMFAFRDGADAMPPRLGSDDGREMTTLAGEMRAVLVEQAAKPSTKPLGQLAT VRTIMIGNRPAIVSARPILPSSARMQIEAGQEFIAVSVKFIDGKAAESIAHYARLEGLHFAPKSKDERAQVPVLSHDGGT IGYLVWPPILPGFMLFQQIAPAGLGCLALLIAVVFWLGRGLHRTSLTLLDSQAELTHHRNHLEEMVADRTAEIERQREEL DRLLVHERQVNALQRQFVAMASHEFRTPLAIIDAAAQRLCRSTTNVGGDYVHEKAGVIRSAVVRMVDLMESILASGRLET GQITLKRSEGDLKALLVTCCDRQRHLSRSHLFHLDLEAIPEGLTFDRSAMEQVFTNLISNAVKYSPNAPNIHVRARVDEK TLEIAIADSGIGMDADDLPKLFQPYYRARSATGIAGTGIGLNVVKQVVELHGGTVEVTSELGKGTTFIIRLPIGSLLSDQ HVAA >Mature_564_residues MKVRLTSHITFVLVTLTCAAAVLLCGFAWLAAIKVDDLSLRRQADFVRQGLEEQIAALPREQESVAKWDDAFLYAKQRNH EWLLDNIGRWTSQYFGHDRTYIFDDTNRLMFAFRDGADAMPPRLGSDDGREMTTLAGEMRAVLVEQAAKPSTKPLGQLAT VRTIMIGNRPAIVSARPILPSSARMQIEAGQEFIAVSVKFIDGKAAESIAHYARLEGLHFAPKSKDERAQVPVLSHDGGT IGYLVWPPILPGFMLFQQIAPAGLGCLALLIAVVFWLGRGLHRTSLTLLDSQAELTHHRNHLEEMVADRTAEIERQREEL DRLLVHERQVNALQRQFVAMASHEFRTPLAIIDAAAQRLCRSTTNVGGDYVHEKAGVIRSAVVRMVDLMESILASGRLET GQITLKRSEGDLKALLVTCCDRQRHLSRSHLFHLDLEAIPEGLTFDRSAMEQVFTNLISNAVKYSPNAPNIHVRARVDEK TLEIAIADSGIGMDADDLPKLFQPYYRARSATGIAGTGIGLNVVKQVVELHGGTVEVTSELGKGTTFIIRLPIGSLLSDQ HVAA
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=30.2521008403361, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1789149, Length=283, Percent_Identity=25.7950530035336, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=28.4518828451883, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788393, Length=248, Percent_Identity=25, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI145693157, Length=279, Percent_Identity=24.3727598566308, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=26.9565217391304, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081816, Length=271, Percent_Identity=27.6752767527675, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=30, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1788279, Length=218, Percent_Identity=28.4403669724771, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788713, Length=227, Percent_Identity=26.8722466960352, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786783, Length=258, Percent_Identity=27.1317829457364, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790861, Length=299, Percent_Identity=25.752508361204, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=26.5873015873016, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI87082128, Length=219, Percent_Identity=21.9178082191781, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787894, Length=257, Percent_Identity=24.9027237354086, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 62356; Mature: 62356
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRLTSHITFVLVTLTCAAAVLLCGFAWLAAIKVDDLSLRRQADFVRQGLEEQIAALPR CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCC EQESVAKWDDAFLYAKQRNHEWLLDNIGRWTSQYFGHDRTYIFDDTNRLMFAFRDGADAM CHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCC PPRLGSDDGREMTTLAGEMRAVLVEQAAKPSTKPLGQLATVRTIMIGNRPAIVSARPILP CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCCEEECCCCCC SSARMQIEAGQEFIAVSVKFIDGKAAESIAHYARLEGLHFAPKSKDERAQVPVLSHDGGT CCCCEEEECCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCE IGYLVWPPILPGFMLFQQIAPAGLGCLALLIAVVFWLGRGLHRTSLTLLDSQAELTHHRN EEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHEEECCHHHHHHHHH HLEEMVADRTAEIERQREELDRLLVHERQVNALQRQFVAMASHEFRTPLAIIDAAAQRLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RSTTNVGGDYVHEKAGVIRSAVVRMVDLMESILASGRLETGQITLKRSEGDLKALLVTCC HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHH DRQRHLSRSHLFHLDLEAIPEGLTFDRSAMEQVFTNLISNAVKYSPNAPNIHVRARVDEK HHHHHCCHHHEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC TLEIAIADSGIGMDADDLPKLFQPYYRARSATGIAGTGIGLNVVKQVVELHGGTVEVTSE EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHH LGKGTTFIIRLPIGSLLSDQHVAA CCCCCEEEEEECCHHHHCCCCCCC >Mature Secondary Structure MKVRLTSHITFVLVTLTCAAAVLLCGFAWLAAIKVDDLSLRRQADFVRQGLEEQIAALPR CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCC EQESVAKWDDAFLYAKQRNHEWLLDNIGRWTSQYFGHDRTYIFDDTNRLMFAFRDGADAM CHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCC PPRLGSDDGREMTTLAGEMRAVLVEQAAKPSTKPLGQLATVRTIMIGNRPAIVSARPILP CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEECCCCCEEECCCCCC SSARMQIEAGQEFIAVSVKFIDGKAAESIAHYARLEGLHFAPKSKDERAQVPVLSHDGGT CCCCEEEECCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCE IGYLVWPPILPGFMLFQQIAPAGLGCLALLIAVVFWLGRGLHRTSLTLLDSQAELTHHRN EEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHEEECCHHHHHHHHH HLEEMVADRTAEIERQREELDRLLVHERQVNALQRQFVAMASHEFRTPLAIIDAAAQRLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RSTTNVGGDYVHEKAGVIRSAVVRMVDLMESILASGRLETGQITLKRSEGDLKALLVTCC HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHH DRQRHLSRSHLFHLDLEAIPEGLTFDRSAMEQVFTNLISNAVKYSPNAPNIHVRARVDEK HHHHHCCHHHEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC TLEIAIADSGIGMDADDLPKLFQPYYRARSATGIAGTGIGLNVVKQVVELHGGTVEVTSE EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHH LGKGTTFIIRLPIGSLLSDQHVAA CCCCCEEEEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]