Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is dipZ [H]

Identifier: 209549646

GI number: 209549646

Start: 2116285

End: 2118054

Strand: Direct

Name: dipZ [H]

Synonym: Rleg2_2053

Alternate gene names: 209549646

Gene position: 2116285-2118054 (Clockwise)

Preceding gene: 209549640

Following gene: 209549647

Centisome position: 46.64

GC content: 65.42

Gene sequence:

>1770_bases
ATGACACTGCTGATCATTGCCTATCTCGGAGGTGCGCTGACGATCCTCAGCCCGTGCATCCTGCCGATCCTCCCCTTCGT
CTTCGCCCGTGCCGGGCAGCCCTTCGTCCGCAGCACGCTGCCGATGCTGGCGGGCATGGCCGCCACCTTCGCTCTCGTCG
CGACACTGGCCGCGGTCGGCGGCAGCTGGGCCATCCGCGCCAATGAATATGGCCGTCTTGCCGCGATCGTCCTGCTGGCG
CTCTTCGGCGCCAGCCTGCTTTCGCCGCGCTTCGCCAGCACCCTCGCCCGGCCGATCGTCGATCTCGGCAACAATCTCCT
GAACGCCAACGGCGGTGGACGCGCTGCGCCGACGGTGAAGAGCGCCCTCATCCTCGGCGTCGCTACCGGCCTGCTCTGGG
CGCCCTGTGCCGGGCCGATCCTCGGCCTTGTTCTCACAGGTGCCGCCCTGCAGGGCGCTAACCTGCAGACCACCTTCCTG
CTCGCCGCCTATGCCGCCGGTGCTGCAACCTCGCTTGCGGTCGCCCTGCTTGTCGGCGGCAGGATATTCGCCGCGATGAA
ACGCTCGCTCGGCCTCGGCGACCGGATTCGCCAGGGTCTCGGTGCTGCGGTACTCGCGGGTGTCGCCGTCATCGCCCTCG
GCCTCGACACCAGCCTGCTGTCGCGGCTTTCCTATGCGAGCACCGCATCACTGGAACAGGCCGTGCTCGACAGGTTGCAT
GCCAAGCCCGCAGCCGGCGCCCCCGCCGAGGTCGCCAGCAACGGCGTGATGATCGCAGACGCCAAGAAGCCCTTTCGCAG
CGATCTGCCGGTCGAAGGGTATGCGCCTTCGCTCGACGGCGCCGTCGAATGGCTGAACTCCAAGCCTCTGGCCACCGAGC
AGCTGCGGGGCAAAGTGGTGCTCGTCGACTTCTGGACCTATTCCTGCATCAACTGCATTCGCACGATCCCCTATGTCAAA
GCCTGGGCGGAAAAATACGCTGATCAGGGCCTCGTGGTGATCGGCGTCCACGCCCCGGAATTCGCCTTCGAGAAGAAGCT
CGACAACGTCAAGAAGGCGGTCGGCGATTTCGAGATCGGCTATCCCGTCGCGATCGACAATGACTACAAAATCTGGCGCG
CCTTCGAAAACAGCTACTGGCCGGCCGGCTATCTCATCGATGCCGAGGGCCAGATCCGCTACCACCATTTCGGCGAAGGC
AACTATGGCAGGACCGAAAAAGCCATTCAGGACCTGCTGCGCGAAGCCGGCAGCCAGATGACGTCAAGTGCGCCGGTCGC
ACCGGATGCTAAGGGCGTGGAAGCCTCTCCGGACCTTGGCAATATCCGCTCCGGCGAAACCTATCTCGGCTACGAACAGG
CGGCGAATTTTGCCTCGCCCGAAGGACTGCAGGCCGACGCGCCGCATGAGTATTCGATCGCAGAACCCGGCCTCAACGGC
TGGGGCCTGTCCGGAACCTGGACTGTCGGCAAGGATCAGGCGAGGCTTGATCAGGCCGGCGGCGGCATCACCTATCGCTT
CAGCGCCCGCGACCTGCATCTTGTTCTCGGCCCCGGCACGGACGGCAAACCGATCCGCTTCCAGGTGACGGTCGACGGCA
AGGCACCGGGAGCGGACCACGGCTCAGACATCGATGCCGACGGCAACGGCACGGTGACGGCGACCAGGCTTTACCAGCTT
GTCCGCCAGTCCGGCACGGTCGGCGCCCGCAACTTCCAGATCCGCTTCCTCGATCCCGGGGTGCAGGCCTACGCCTTCAC
CTTCGGCTGA

Upstream 100 bases:

>100_bases
GACACATCCGGGATACGTCCGCCCGGCCATATCCTCGCCGTTGCTGGTTCAGGCCCATCGCCGTCCAGAGCCCGATCAAT
CGGTTTCAAAGGAAACGATG

Downstream 100 bases:

>100_bases
CCCGCAGACTGATCAATTCCGATCCTCGACAACGACCAAAGGAGTGATACCCATGAACAGACGTCTTCTTTTCACGGCAG
CCCTTGCCTTCGCCACCGCC

Product: redoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVGGSWAIRANEYGRLAAIVLLA
LFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVKSALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFL
LAAYAAGAATSLAVALLVGGRIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH
AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVVLVDFWTYSCINCIRTIPYVK
AWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEG
NYGRTEKAIQDLLREAGSQMTSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG
WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADHGSDIDADGNGTVTATRLYQL
VRQSGTVGARNFQIRFLDPGVQAYAFTFG

Sequences:

>Translated_589_residues
MTLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVGGSWAIRANEYGRLAAIVLLA
LFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVKSALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFL
LAAYAAGAATSLAVALLVGGRIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH
AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVVLVDFWTYSCINCIRTIPYVK
AWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEG
NYGRTEKAIQDLLREAGSQMTSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG
WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADHGSDIDADGNGTVTATRLYQL
VRQSGTVGARNFQIRFLDPGVQAYAFTFG
>Mature_588_residues
TLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVGGSWAIRANEYGRLAAIVLLAL
FGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVKSALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFLL
AAYAAGAATSLAVALLVGGRIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLHA
KPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVVLVDFWTYSCINCIRTIPYVKA
WAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIGYPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEGN
YGRTEKAIQDLLREAGSQMTSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNGW
GLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADHGSDIDADGNGTVTATRLYQLV
RQSGTVGARNFQIRFLDPGVQAYAFTFG

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42476013, Length=133, Percent_Identity=38.3458646616541, Blast_Score=107, Evalue=4e-23,
Organism=Drosophila melanogaster, GI116007528, Length=215, Percent_Identity=29.7674418604651, Blast_Score=94, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR003834
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 61790; Mature: 61659

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVG
CEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSWAIRANEYGRLAAIVLLALFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVK
CCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH
SALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFLLAAYAAGAATSLAVALLVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVV
CCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCEE
LVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIG
EEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCC
YPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEGNYGRTEKAIQDLLREAGSQM
CEEEECCCCHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
TSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADH
CCCCCEEECCCCHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCC
GSDIDADGNGTVTATRLYQLVRQSGTVGARNFQIRFLDPGVQAYAFTFG
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
TLLIIAYLGGALTILSPCILPILPFVFARAGQPFVRSTLPMLAGMAATFALVATLAAVG
EEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSWAIRANEYGRLAAIVLLALFGASLLSPRFASTLARPIVDLGNNLLNANGGGRAAPTVK
CCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH
SALILGVATGLLWAPCAGPILGLVLTGAALQGANLQTTFLLAAYAAGAATSLAVALLVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIFAAMKRSLGLGDRIRQGLGAAVLAGVAVIALGLDTSLLSRLSYASTASLEQAVLDRLH
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AKPAAGAPAEVASNGVMIADAKKPFRSDLPVEGYAPSLDGAVEWLNSKPLATEQLRGKVV
CCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCEE
LVDFWTYSCINCIRTIPYVKAWAEKYADQGLVVIGVHAPEFAFEKKLDNVKKAVGDFEIG
EEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCC
YPVAIDNDYKIWRAFENSYWPAGYLIDAEGQIRYHHFGEGNYGRTEKAIQDLLREAGSQM
CEEEECCCCHHHHHHCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
TSSAPVAPDAKGVEASPDLGNIRSGETYLGYEQAANFASPEGLQADAPHEYSIAEPGLNG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
WGLSGTWTVGKDQARLDQAGGGITYRFSARDLHLVLGPGTDGKPIRFQVTVDGKAPGADH
CCCCCEEECCCCHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCCCC
GSDIDADGNGTVTATRLYQLVRQSGTVGARNFQIRFLDPGVQAYAFTFG
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]