| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yccK [H]
Identifier: 209549640
GI number: 209549640
Start: 2110274
End: 2111263
Strand: Direct
Name: yccK [H]
Synonym: Rleg2_2047
Alternate gene names: 209549640
Gene position: 2110274-2111263 (Clockwise)
Preceding gene: 209549639
Following gene: 209549646
Centisome position: 46.5
GC content: 61.92
Gene sequence:
>990_bases ATGCATAAGCGTGAACTCGGAAAGAGCGGTCTCGAAGTCTCGGCCATCGGTCTCGGCTGCATGGGGCTAAGTTATGGATA TGGCCCAGCGACAGATATCCAGGAAGCCGTCGCGCTGATCCGGCAGGCGGTCGAACGTGGCGTGACCTTCTTCGACACCG CGGAAGCCTACGGCCCCTATAGAAACGAAGAGCTTTTGGGAGAAGCACTTGCTCCCTTTCGCAGCGAGGTAGTGATCGCC ACCAAATTCGGCTTCAACTTCGATGCCAATGGCGGCCAGAGTGGCATGAACAGCCGGCCCGAGCAGATCCGGGCAGTTGC CGACCAGGCGTTGAAGCGCTTGAAGACCGATGTCATCGATCTGTTCTACCAGCATCGCGTCGATCCGGATGTTCCGATCG AGGACGTCGCTGGCACGGTCAAGGCGCTGATTTCAGAAGGCAAGGTGAAGCATTTCGGCCTCTCGGAAGCCGGCTCCAAG ACGATCCGCCGCGCCCATGCCGTTCAGCCGGTGGCGGCGCTGCAGAGCGAATATTCGCTCTGGTGGCGCGAGCCCGAGCA GGATATCCTGCCGGTGCTCGAAGAGCTCGGCATCGGCTTCGTGCCGTTCAGCCCGCTCGGCAAGGGCTTCCTCACCGGCG CGATCAGCGAAACCACAACCTTCGACAGCAAGGACTTCCGCAACATCGTGCCGCGCTTTTCACCGGAAGCGCGAAAGGCC AACCAGGCGCTCGTCGATCTCCTCGCAGAGATCGCCGCGCGCAAGCAGGCGACCTCCGCCCAGGTGGCGCTCGCCTGGCT GCTGGCGCAAAAACCCTGGATCGTGCCGATCCCCGGCACCACCAAGCTGCATCGCCTGGAGGAGAATATCCGGGCCGCCG AGGTCGAACTGACGGCGGAGGATCTCGGCAATATCGAAAGCGCGCTCGCCACCATCAAGGTGGAAGGCGATCGATATCCC GCGCATCTGCAGGCAAGGGTCAATCGCTGA
Upstream 100 bases:
>100_bases ATGACCCATATCGCCATCCAGGAACAGCTCGACGGCAAGGTGGTCGACTGGATGGAGCATGTCACTGACAGCGAGTACCA AGCTTAGAAAGGAAAAGGCG
Downstream 100 bases:
>100_bases GAACAGAAGCGGCCGCCATCATGTGCGGCCGCTCTTCATTGATCGCATCACCGTCTCGGCGCCGGCGCATTCTCCTCGAA AGCCGGGATCGCCTCGAGCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MHKRELGKSGLEVSAIGLGCMGLSYGYGPATDIQEAVALIRQAVERGVTFFDTAEAYGPYRNEELLGEALAPFRSEVVIA TKFGFNFDANGGQSGMNSRPEQIRAVADQALKRLKTDVIDLFYQHRVDPDVPIEDVAGTVKALISEGKVKHFGLSEAGSK TIRRAHAVQPVAALQSEYSLWWREPEQDILPVLEELGIGFVPFSPLGKGFLTGAISETTTFDSKDFRNIVPRFSPEARKA NQALVDLLAEIAARKQATSAQVALAWLLAQKPWIVPIPGTTKLHRLEENIRAAEVELTAEDLGNIESALATIKVEGDRYP AHLQARVNR
Sequences:
>Translated_329_residues MHKRELGKSGLEVSAIGLGCMGLSYGYGPATDIQEAVALIRQAVERGVTFFDTAEAYGPYRNEELLGEALAPFRSEVVIA TKFGFNFDANGGQSGMNSRPEQIRAVADQALKRLKTDVIDLFYQHRVDPDVPIEDVAGTVKALISEGKVKHFGLSEAGSK TIRRAHAVQPVAALQSEYSLWWREPEQDILPVLEELGIGFVPFSPLGKGFLTGAISETTTFDSKDFRNIVPRFSPEARKA NQALVDLLAEIAARKQATSAQVALAWLLAQKPWIVPIPGTTKLHRLEENIRAAEVELTAEDLGNIESALATIKVEGDRYP AHLQARVNR >Mature_329_residues MHKRELGKSGLEVSAIGLGCMGLSYGYGPATDIQEAVALIRQAVERGVTFFDTAEAYGPYRNEELLGEALAPFRSEVVIA TKFGFNFDANGGQSGMNSRPEQIRAVADQALKRLKTDVIDLFYQHRVDPDVPIEDVAGTVKALISEGKVKHFGLSEAGSK TIRRAHAVQPVAALQSEYSLWWREPEQDILPVLEELGIGFVPFSPLGKGFLTGAISETTTFDSKDFRNIVPRFSPEARKA NQALVDLLAEIAARKQATSAQVALAWLLAQKPWIVPIPGTTKLHRLEENIRAAEVELTAEDLGNIESALATIKVEGDRYP AHLQARVNR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=326, Percent_Identity=30.6748466257669, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI27436966, Length=326, Percent_Identity=30.6748466257669, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI27436962, Length=326, Percent_Identity=30.6748466257669, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436971, Length=330, Percent_Identity=30.3030303030303, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436969, Length=327, Percent_Identity=30.2752293577982, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=30.2469135802469, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI223718702, Length=295, Percent_Identity=28.4745762711864, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI41327764, Length=199, Percent_Identity=30.6532663316583, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI41152114, Length=308, Percent_Identity=27.5974025974026, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=31.974921630094, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1789375, Length=326, Percent_Identity=31.2883435582822, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788070, Length=329, Percent_Identity=29.483282674772, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787674, Length=306, Percent_Identity=30.0653594771242, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1788081, Length=275, Percent_Identity=26.9090909090909, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=27.5071633237822, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI48994888, Length=294, Percent_Identity=29.2517006802721, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=340, Percent_Identity=27.0588235294118, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=26.9349845201238, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6325384, Length=351, Percent_Identity=28.7749287749288, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319958, Length=293, Percent_Identity=25.2559726962457, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6319951, Length=287, Percent_Identity=25.4355400696864, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=248, Percent_Identity=25, Blast_Score=86, Evalue=6e-18, Organism=Drosophila melanogaster, GI24640980, Length=324, Percent_Identity=26.2345679012346, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45549126, Length=321, Percent_Identity=26.4797507788162, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646155, Length=163, Percent_Identity=32.5153374233129, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646159, Length=224, Percent_Identity=26.3392857142857, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36004; Mature: 36004
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKRELGKSGLEVSAIGLGCMGLSYGYGPATDIQEAVALIRQAVERGVTFFDTAEAYGPY CCCHHHCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHCCCC RNEELLGEALAPFRSEVVIATKFGFNFDANGGQSGMNSRPEQIRAVADQALKRLKTDVID CCHHHHHHHHCCHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LFYQHRVDPDVPIEDVAGTVKALISEGKVKHFGLSEAGSKTIRRAHAVQPVAALQSEYSL HHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH WWREPEQDILPVLEELGIGFVPFSPLGKGFLTGAISETTTFDSKDFRNIVPRFSPEARKA HCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHH NQALVDLLAEIAARKQATSAQVALAWLLAQKPWIVPIPGTTKLHRLEENIRAAEVELTAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHEEECHH DLGNIESALATIKVEGDRYPAHLQARVNR HHCCHHHHHEEEEECCCCCCHHHHEECCC >Mature Secondary Structure MHKRELGKSGLEVSAIGLGCMGLSYGYGPATDIQEAVALIRQAVERGVTFFDTAEAYGPY CCCHHHCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHCCCC RNEELLGEALAPFRSEVVIATKFGFNFDANGGQSGMNSRPEQIRAVADQALKRLKTDVID CCHHHHHHHHCCHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LFYQHRVDPDVPIEDVAGTVKALISEGKVKHFGLSEAGSKTIRRAHAVQPVAALQSEYSL HHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH WWREPEQDILPVLEELGIGFVPFSPLGKGFLTGAISETTTFDSKDFRNIVPRFSPEARKA HCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHH NQALVDLLAEIAARKQATSAQVALAWLLAQKPWIVPIPGTTKLHRLEENIRAAEVELTAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHEEECHH DLGNIESALATIKVEGDRYPAHLQARVNR HHCCHHHHHEEEEECCCCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]