Click here to switch to the map view.

The map label for this gene is 209549639

Identifier: 209549639

GI number: 209549639

Start: 2109865

End: 2110260

Strand: Direct

Name: 209549639

Synonym: Rleg2_2046

Alternate gene names: NA

Gene position: 2109865-2110260 (Clockwise)

Preceding gene: 209549635

Following gene: 209549640

Centisome position: 46.49

GC content: 65.66

Gene sequence:

>396_bases
ATGGAAATCAAGCGAAGCGGCTCGCAGCCCTCGGCCAAAGGACCGGCAGACTGGTTCACCGGCACGGTGCGCATCGATCC
TCTCTTTCAGGTGACCGACCCGGCCCGCGCGGCTGGCGCCAGCGTCACTTTCGAGCCCGGCGCCCGAACCGCCTGGCACA
CCCATCCGCTCGGCCAGACGCTGATCGTCACATCCGGTTGCGGCCGGGTGCAGCGCGAAGCTGGGCCTGTCGAGGAGATC
CGCGCTGGCGACGTCGTCTGGTTCTCCCCCGGTGAACGCCATTGGCATGGCGCATCGCCGACGACGGCAATGACCCATAT
CGCCATCCAGGAACAGCTCGACGGCAAGGTGGTCGACTGGATGGAGCATGTCACTGACAGCGAGTACCAAGCTTAG

Upstream 100 bases:

>100_bases
CGGCCAAAGGCACGCGCTAAATATCCTGTCATCTGAGGACGAAGACATCCGCCGCGCGCGGACGAACGCCCCCAACCCTC
TGACACAGGAAAGAACGATC

Downstream 100 bases:

>100_bases
AAAGGAAAAGGCGATGCATAAGCGTGAACTCGGAAAGAGCGGTCTCGAAGTCTCGGCCATCGGTCTCGGCTGCATGGGGC
TAAGTTATGGATATGGCCCA

Product: cupin

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin Family Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Double-Stranded Beta-Helix-Like Protein; Carboxymuconolactone Decarboxylase Family Protein; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein; Secreted Protein

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MEIKRSGSQPSAKGPADWFTGTVRIDPLFQVTDPARAAGASVTFEPGARTAWHTHPLGQTLIVTSGCGRVQREAGPVEEI
RAGDVVWFSPGERHWHGASPTTAMTHIAIQEQLDGKVVDWMEHVTDSEYQA

Sequences:

>Translated_131_residues
MEIKRSGSQPSAKGPADWFTGTVRIDPLFQVTDPARAAGASVTFEPGARTAWHTHPLGQTLIVTSGCGRVQREAGPVEEI
RAGDVVWFSPGERHWHGASPTTAMTHIAIQEQLDGKVVDWMEHVTDSEYQA
>Mature_131_residues
MEIKRSGSQPSAKGPADWFTGTVRIDPLFQVTDPARAAGASVTFEPGARTAWHTHPLGQTLIVTSGCGRVQREAGPVEEI
RAGDVVWFSPGERHWHGASPTTAMTHIAIQEQLDGKVVDWMEHVTDSEYQA

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14262; Mature: 14262

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKRSGSQPSAKGPADWFTGTVRIDPLFQVTDPARAAGASVTFEPGARTAWHTHPLGQT
CCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHCCCEEEECCCCCCCEECCCCCCE
LIVTSGCGRVQREAGPVEEIRAGDVVWFSPGERHWHGASPTTAMTHIAIQEQLDGKVVDW
EEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
MEHVTDSEYQA
HHHHCCCCCCC
>Mature Secondary Structure
MEIKRSGSQPSAKGPADWFTGTVRIDPLFQVTDPARAAGASVTFEPGARTAWHTHPLGQT
CCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHCCCEEEECCCCCCCEECCCCCCE
LIVTSGCGRVQREAGPVEEIRAGDVVWFSPGERHWHGASPTTAMTHIAIQEQLDGKVVDW
EEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
MEHVTDSEYQA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA