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The map label for this gene is rbsB [H]

Identifier: 209549628

GI number: 209549628

Start: 2097297

End: 2098226

Strand: Direct

Name: rbsB [H]

Synonym: Rleg2_2035

Alternate gene names: 209549628

Gene position: 2097297-2098226 (Clockwise)

Preceding gene: 209549627

Following gene: 209549629

Centisome position: 46.22

GC content: 60.75

Gene sequence:

>930_bases
ATGAAAATTGCGCGCACCATGCTCGCGTCTGCTGCCCTGCTCGGCCTCACGCTTGGCCCCGTACACGCAGCCGAACTGAA
GAAGCTCGGCTTGGCCGTTGCCAACCTTCAGGCAAACTTCTTCAACCAGATCAAGCAATCGGTCGAAGCCGAAGCCAAGA
AGCGCGGCATCGAAGTCGTCACGGTCGACGCAAAGGGCGACGGGCCGACCCAGGTCAACCAGATCCAGGATCTGCTGACC
CAGAAAATCGACGCGCTGATCTACATTCCGGCCGGTGCGGCCGCTGCGACCGTTCCCGTCAAGCTCGCAAAGAGCGCCGG
CATCCCGGTCGTAAACGTCGACCGCAACGCGGAGGGAGCACCGGGCGATACATTCCTTGCAACGGATTCCGTCGCCTCTG
CCAAGGCGGTGTGCGACTACATCCTCAAGGAAGCCGGCGGCAAGGGTAAGATGGTGATCATCCACGGCCAGAAGGGCACG
ACGCCGGAAGTCGATCGCTCGAAGGGCTGCGCTGAATCCCTGAAGGCATATCCTGATGTGAAGGTTGTCGCCGAGCAGTT
CTCCAACATCTGGAGCCAGGACGAAGGCTTCCAGATCATGCAGAACATGCTGCAGGCAAACCCCGATGTTTCAATCGTCT
TCGCACAGGCCGACGGTCTCGCACTTGGCGCCGCGCAGGCGATCAAGGTCGCCAATCCGTCGCAGAAGATCGTCGTTGGC
GGCTTCGATGGCGATACCGCGGCGCTTGAAGCCCTCAGCAAGGGTGTCTTCAACGTCACTGCGACGCAGCAGACGCAGAA
AATGGGCCGCGACGCGGTTGAAAATGCCGCCAAGCTTGTCGCCGGAGAAAAGGTGCCCCCGGTCCAGCTCCTGGATGCCA
CGCTGACAACCAAGGAAAACGTCGCAGGCTTCATCGCCAACCATCCCTAG

Upstream 100 bases:

>100_bases
GTCGGCGGGCCCGAAAATTCCGCTCCAAGGGTTTGGGGCGGATCAATACCCCGAGGGGGAGGACATACCCGAGGGTCCCA
TCAACAACGGAGGAAATACA

Downstream 100 bases:

>100_bases
CGTCCTTTGTGCGTCCGAAAGGACGCACGGCGCTCTAATGAAACTGACGTCTTGAGGAGGTGTGCCGTGACTGATCCAGT
TCTTTCCCTGAGGGGCATAT

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKIARTMLASAALLGLTLGPVHAAELKKLGLAVANLQANFFNQIKQSVEAEAKKRGIEVVTVDAKGDGPTQVNQIQDLLT
QKIDALIYIPAGAAAATVPVKLAKSAGIPVVNVDRNAEGAPGDTFLATDSVASAKAVCDYILKEAGGKGKMVIIHGQKGT
TPEVDRSKGCAESLKAYPDVKVVAEQFSNIWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG
GFDGDTAALEALSKGVFNVTATQQTQKMGRDAVENAAKLVAGEKVPPVQLLDATLTTKENVAGFIANHP

Sequences:

>Translated_309_residues
MKIARTMLASAALLGLTLGPVHAAELKKLGLAVANLQANFFNQIKQSVEAEAKKRGIEVVTVDAKGDGPTQVNQIQDLLT
QKIDALIYIPAGAAAATVPVKLAKSAGIPVVNVDRNAEGAPGDTFLATDSVASAKAVCDYILKEAGGKGKMVIIHGQKGT
TPEVDRSKGCAESLKAYPDVKVVAEQFSNIWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG
GFDGDTAALEALSKGVFNVTATQQTQKMGRDAVENAAKLVAGEKVPPVQLLDATLTTKENVAGFIANHP
>Mature_309_residues
MKIARTMLASAALLGLTLGPVHAAELKKLGLAVANLQANFFNQIKQSVEAEAKKRGIEVVTVDAKGDGPTQVNQIQDLLT
QKIDALIYIPAGAAAATVPVKLAKSAGIPVVNVDRNAEGAPGDTFLATDSVASAKAVCDYILKEAGGKGKMVIIHGQKGT
TPEVDRSKGCAESLKAYPDVKVVAEQFSNIWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG
GFDGDTAALEALSKGVFNVTATQQTQKMGRDAVENAAKLVAGEKVPPVQLLDATLTTKENVAGFIANHP

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=271, Percent_Identity=33.5793357933579, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790526, Length=305, Percent_Identity=26.8852459016393, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1790674, Length=221, Percent_Identity=29.4117647058824, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1789990, Length=275, Percent_Identity=28, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788898, Length=327, Percent_Identity=25.3822629969419, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 32151; Mature: 32151

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIARTMLASAALLGLTLGPVHAAELKKLGLAVANLQANFFNQIKQSVEAEAKKRGIEVV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
TVDAKGDGPTQVNQIQDLLTQKIDALIYIPAGAAAATVPVKLAKSAGIPVVNVDRNAEGA
EEECCCCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
PGDTFLATDSVASAKAVCDYILKEAGGKGKMVIIHGQKGTTPEVDRSKGCAESLKAYPDV
CCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCH
KVVAEQFSNIWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEECCHHEEEECCCCCEEEEE
GFDGDTAALEALSKGVFNVTATQQTQKMGRDAVENAAKLVAGEKVPPVQLLDATLTTKEN
CCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
VAGFIANHP
HHHHCCCCC
>Mature Secondary Structure
MKIARTMLASAALLGLTLGPVHAAELKKLGLAVANLQANFFNQIKQSVEAEAKKRGIEVV
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
TVDAKGDGPTQVNQIQDLLTQKIDALIYIPAGAAAATVPVKLAKSAGIPVVNVDRNAEGA
EEECCCCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
PGDTFLATDSVASAKAVCDYILKEAGGKGKMVIIHGQKGTTPEVDRSKGCAESLKAYPDV
CCCCEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCH
KVVAEQFSNIWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEECCHHEEEECCCCCEEEEE
GFDGDTAALEALSKGVFNVTATQQTQKMGRDAVENAAKLVAGEKVPPVQLLDATLTTKEN
CCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
VAGFIANHP
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]