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The map label for this gene is rbsC [H]

Identifier: 209549627

GI number: 209549627

Start: 2096195

End: 2097175

Strand: Direct

Name: rbsC [H]

Synonym: Rleg2_2034

Alternate gene names: 209549627

Gene position: 2096195-2097175 (Clockwise)

Preceding gene: 209549622

Following gene: 209549628

Centisome position: 46.19

GC content: 61.37

Gene sequence:

>981_bases
ATGGTGGCGCTCGACATCAATGAACACAGGCTTTCGTCCGGAGCCTGGCTGAGCAAGCTCAAGGGAGCAACCGGCCCGCT
CGTCGGACTGCTCGCGCTGTGCGTCTTTCTGAGCCTGAGCACCGACACGTTTCTTTCGGTTCGAAACGGCCTCAACATCC
TCGATCAGATCACCGTTCTCGGCATCATGGCGGTTGGAATGACCTTCGTCATCCTAATCGGCGGCATCGATCTCTCGGTC
GGCTCGGCGCTTGCCCTGGCGATGATGGTCATGGGCTGGACCGCCAATGTCGCCGGCCTGCCGCTGCCGGTCGCGATCGC
TTTTGCTCTGGTCGCATCGGGAGTTTCGGGCCTGATCGTCGGACTTCTGGTGACGCAGTTCAGGGTCCCGGCCTTTATTG
CCACTCTTGCGATGATGTCCGCCGCTCGCGGGGTCGCCAACATGATCACCGACGGTCAGCAGATCGTCGGATTCCCGGAC
TGGTTCATGATGCTGGCAATCGATCGTCATTTCGGCGTGTTGACCGCCACCGTGTTTCTCATGCTTGCGGTGGTTCTTGC
GGCATGGCTTTTCCTGCACTTCCGCTCCGAAGGGCGCATGCTCTATGCGGTCGGCGGAAATCCGGAAGTCGCGCGCCTTG
CGGGTATCAACGTCCCGCTCGTGACGATTGGCGTCTACGTCGTAAGTTCAGTCCTTGCCGGCCTCGCAGGCATCGTACTC
GCCGCCAGGCTGGATTCCGTCCAACCATCAAGCGGTCTGGGCTATGAGCTGGACACCATCGCCGCGGTCGTCATCGGCGG
CACGTCGCTCTCCGGCGGCGCCGGCGGGATAGGAGGAACATTGATCGGTGTTCTTATCATCGGCGTCCTTCGCAACGGGC
TCAATCTTCTCAACGTCTCGCCGTTCCTGCAGCAGGTGATCATCGGCATCGTCATCGTGCTCGCGGTCGGCGCGGAGACT
ATTCGTCGGCGTCGCGCTTGA

Upstream 100 bases:

>100_bases
ACAGCCAGAAAGCAACTTGTTAATGAATTTTCCAACAAGCGTGAATAATTATTCTAGCTTGCACAAATATCGGATACAAG
CCTAGGCATAGGGAGGAGCA

Downstream 100 bases:

>100_bases
CGAACGGGGTCCGTCCGCCGCGTCGGCGGGCCCGAAAATTCCGCTCCAAGGGTTTGGGGCGGATCAATACCCCGAGGGGG
AGGACATACCCGAGGGTCCC

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVALDINEHRLSSGAWLSKLKGATGPLVGLLALCVFLSLSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGGIDLSV
GSALALAMMVMGWTANVAGLPLPVAIAFALVASGVSGLIVGLLVTQFRVPAFIATLAMMSAARGVANMITDGQQIVGFPD
WFMMLAIDRHFGVLTATVFLMLAVVLAAWLFLHFRSEGRMLYAVGGNPEVARLAGINVPLVTIGVYVVSSVLAGLAGIVL
AARLDSVQPSSGLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGIVIVLAVGAET
IRRRRA

Sequences:

>Translated_326_residues
MVALDINEHRLSSGAWLSKLKGATGPLVGLLALCVFLSLSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGGIDLSV
GSALALAMMVMGWTANVAGLPLPVAIAFALVASGVSGLIVGLLVTQFRVPAFIATLAMMSAARGVANMITDGQQIVGFPD
WFMMLAIDRHFGVLTATVFLMLAVVLAAWLFLHFRSEGRMLYAVGGNPEVARLAGINVPLVTIGVYVVSSVLAGLAGIVL
AARLDSVQPSSGLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGIVIVLAVGAET
IRRRRA
>Mature_326_residues
MVALDINEHRLSSGAWLSKLKGATGPLVGLLALCVFLSLSTDTFLSVRNGLNILDQITVLGIMAVGMTFVILIGGIDLSV
GSALALAMMVMGWTANVAGLPLPVAIAFALVASGVSGLIVGLLVTQFRVPAFIATLAMMSAARGVANMITDGQQIVGFPD
WFMMLAIDRHFGVLTATVFLMLAVVLAAWLFLHFRSEGRMLYAVGGNPEVARLAGINVPLVTIGVYVVSSVLAGLAGIVL
AARLDSVQPSSGLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGIVIVLAVGAET
IRRRRA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=329, Percent_Identity=45.5927051671732, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1788896, Length=326, Percent_Identity=36.8098159509202, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI145693152, Length=292, Percent_Identity=36.986301369863, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI87082395, Length=280, Percent_Identity=39.2857142857143, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1790524, Length=295, Percent_Identity=37.2881355932203, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=41.304347826087, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI145693214, Length=265, Percent_Identity=37.7358490566038, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788471, Length=333, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787793, Length=270, Percent_Identity=32.5925925925926, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787794, Length=277, Percent_Identity=29.2418772563177, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33600; Mature: 33600

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALDINEHRLSSGAWLSKLKGATGPLVGLLALCVFLSLSTDTFLSVRNGLNILDQITVL
CEEECCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH
GIMAVGMTFVILIGGIDLSVGSALALAMMVMGWTANVAGLPLPVAIAFALVASGVSGLIV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHH
GLLVTQFRVPAFIATLAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVLTATVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MLAVVLAAWLFLHFRSEGRMLYAVGGNPEVARLAGINVPLVTIGVYVVSSVLAGLAGIVL
HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AARLDSVQPSSGLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVS
HHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PFLQQVIIGIVIVLAVGAETIRRRRA
HHHHHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure
MVALDINEHRLSSGAWLSKLKGATGPLVGLLALCVFLSLSTDTFLSVRNGLNILDQITVL
CEEECCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH
GIMAVGMTFVILIGGIDLSVGSALALAMMVMGWTANVAGLPLPVAIAFALVASGVSGLIV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHH
GLLVTQFRVPAFIATLAMMSAARGVANMITDGQQIVGFPDWFMMLAIDRHFGVLTATVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MLAVVLAAWLFLHFRSEGRMLYAVGGNPEVARLAGINVPLVTIGVYVVSSVLAGLAGIVL
HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AARLDSVQPSSGLGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVS
HHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PFLQQVIIGIVIVLAVGAETIRRRRA
HHHHHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]