| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is psuG1 [H]
Identifier: 209549554
GI number: 209549554
Start: 2006512
End: 2007438
Strand: Direct
Name: psuG1 [H]
Synonym: Rleg2_1960
Alternate gene names: 209549554
Gene position: 2006512-2007438 (Clockwise)
Preceding gene: 209549553
Following gene: 209549556
Centisome position: 44.22
GC content: 65.37
Gene sequence:
>927_bases ATGACCAAGCCCATTTCGCCTCTTCTGCCGATCGCCTATTCGAAGGAGGTCGCCAGCGCCAAGCAGCGCGGCGCGCCGCT GGTGGCGCTGGAATCGACCATCATCACCCATGGCATGCCCTATCCCGGCAATATCGAGATGGCCCGCAGCGTCGAGACGA TCATTCGCGAACAGGGTGCGGTGCCGGCAACCATCGCCGTCATTCACGGCACGCTGCATATCGGCCTTGAAGCCGGCGAA CTGGAGCAGCTTGCCAAGGCGACCGAAGTGATGAAGGTGTCGCGCGCCGATCTCGCGTTTGCGATCGCCGAGCGCCGCAC CGGCGCCACCACGGTCGCCGCGACGATGATCGCCGCCGCCCGCGCCGGCATCCGCGTTTTTGCCACAGGCGGCATCGGCG GCGTGCACCGCGGCGCCGAGGAAAGCTTCGACATATCCGCCGACCTCGAGGAACTGGCCAGCACCGGCGTCATCGTCGTC TGCGCCGGCGCCAAGGCGATCCTCGACATTCCGAAGACGCTGGAAGTGTTGGAAACCCGCGGCGTTCCTGTCGTCACCTA TGAGAGCGAAGAATTCCCCGCCTTCTGGTCACGCGCCTCGGGCATCCGCAGCCCGCTGTCGCTGAACAGCCCGGCCGCCA TCGCCAATTTCCAGACGGTGCGCGAACAGCTCGGCATCGACGGCGGCATGCTTATCGCCAACCCGGTGCCCGAGGCCGAC GAGATCGCCCGCGAGGAGATGGAGATCTACATCGAGCGCGCACTCGACAGCGCCGAGCGCGACGAAATCACCGGCAAGGC GGTAACGCCCTATCTGCTCTCGACCATCTTCGACCTCACGGACGGCCAGAGCCTCAAGACCAATATCGCGCTGGTGGAGA ACAATGCGCGGCTGGCGGCTGAGATTGCCGTGGCGCTTGGCGAGTAA
Upstream 100 bases:
>100_bases AGAATTCTGCAATGAAGCGGCTAAATTGAAGTTCACCATGATGTCGTCCGAAAACCGCTGAGACTTCGGCATCATGCTCT ATCGACGACAGGACAAGATC
Downstream 100 bases:
>100_bases GGGATGGGCGGGCTGTAATCGCCTTGGCAGATCGGGCGTGCCGTGCAAGCCCCCCTCTGCCCTGCCGGGCATCTCCCCCA CAGGTGGGGAGATTGGCTGG
Product: indigoidine synthase A family protein
Products: NA
Alternate protein names: PsiMP glycosidase 1 [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTKPISPLLPIAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSVETIIREQGAVPATIAVIHGTLHIGLEAGE LEQLAKATEVMKVSRADLAFAIAERRTGATTVAATMIAAARAGIRVFATGGIGGVHRGAEESFDISADLEELASTGVIVV CAGAKAILDIPKTLEVLETRGVPVVTYESEEFPAFWSRASGIRSPLSLNSPAAIANFQTVREQLGIDGGMLIANPVPEAD EIAREEMEIYIERALDSAERDEITGKAVTPYLLSTIFDLTDGQSLKTNIALVENNARLAAEIAVALGE
Sequences:
>Translated_308_residues MTKPISPLLPIAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSVETIIREQGAVPATIAVIHGTLHIGLEAGE LEQLAKATEVMKVSRADLAFAIAERRTGATTVAATMIAAARAGIRVFATGGIGGVHRGAEESFDISADLEELASTGVIVV CAGAKAILDIPKTLEVLETRGVPVVTYESEEFPAFWSRASGIRSPLSLNSPAAIANFQTVREQLGIDGGMLIANPVPEAD EIAREEMEIYIERALDSAERDEITGKAVTPYLLSTIFDLTDGQSLKTNIALVENNARLAAEIAVALGE >Mature_307_residues TKPISPLLPIAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSVETIIREQGAVPATIAVIHGTLHIGLEAGEL EQLAKATEVMKVSRADLAFAIAERRTGATTVAATMIAAARAGIRVFATGGIGGVHRGAEESFDISADLEELASTGVIVVC AGAKAILDIPKTLEVLETRGVPVVTYESEEFPAFWSRASGIRSPLSLNSPAAIANFQTVREQLGIDGGMLIANPVPEADE IAREEMEIYIERALDSAERDEITGKAVTPYLLSTIFDLTDGQSLKTNIALVENNARLAAEIAVALGE
Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil [H]
COG id: COG2313
COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family [H]
Homologues:
Organism=Escherichia coli, GI1788490, Length=300, Percent_Identity=53.3333333333333, Blast_Score=295, Evalue=2e-81, Organism=Caenorhabditis elegans, GI25147470, Length=307, Percent_Identity=44.299674267101, Blast_Score=259, Evalue=1e-69, Organism=Drosophila melanogaster, GI24580669, Length=302, Percent_Identity=48.6754966887417, Blast_Score=272, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022830 - InterPro: IPR007342 [H]
Pfam domain/function: PF04227 Indigoidine_A [H]
EC number: NA
Molecular weight: Translated: 32514; Mature: 32382
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPISPLLPIAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSVETIIREQGA CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC VPATIAVIHGTLHIGLEAGELEQLAKATEVMKVSRADLAFAIAERRTGATTVAATMIAAA CCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RAGIRVFATGGIGGVHRGAEESFDISADLEELASTGVIVVCAGAKAILDIPKTLEVLETR HCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHC GVPVVTYESEEFPAFWSRASGIRSPLSLNSPAAIANFQTVREQLGIDGGMLIANPVPEAD CCEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHH EIAREEMEIYIERALDSAERDEITGKAVTPYLLSTIFDLTDGQSLKTNIALVENNARLAA HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEE EIAVALGE EHEEECCC >Mature Secondary Structure TKPISPLLPIAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSVETIIREQGA CCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC VPATIAVIHGTLHIGLEAGELEQLAKATEVMKVSRADLAFAIAERRTGATTVAATMIAAA CCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RAGIRVFATGGIGGVHRGAEESFDISADLEELASTGVIVVCAGAKAILDIPKTLEVLETR HCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHC GVPVVTYESEEFPAFWSRASGIRSPLSLNSPAAIANFQTVREQLGIDGGMLIANPVPEAD CCEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHH EIAREEMEIYIERALDSAERDEITGKAVTPYLLSTIFDLTDGQSLKTNIALVENNARLAA HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEE EIAVALGE EHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA