| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209549438
Identifier: 209549438
GI number: 209549438
Start: 1892830
End: 1893930
Strand: Direct
Name: 209549438
Synonym: Rleg2_1844
Alternate gene names: NA
Gene position: 1892830-1893930 (Clockwise)
Preceding gene: 209549434
Following gene: 209549443
Centisome position: 41.71
GC content: 64.58
Gene sequence:
>1101_bases ATGTTTGGCATTTCGCCTTTTGCACGCATCGGCCTTGCCATTGCCCTGACGATCCTGACGCCTCCAGGCGCCAGCGCTCA GGATGCCTTCAAGGAATTCAAACAGCTTGAATCGACGTCGAAGATGCCGAAGCTCGATGCCTTCATCGCGCCCGGCACGG CGCCTGAAGGGGTCAAGCTGCGCGATGTGCCAATGGAAGCCAAGCTGACGGCGGACGGCACGCCAGTCGAAGAAGGCCTC TCCTGGTATGTCTTCAGCCCGATTGCCGGAACCGACGGCAAGCTGCCGCTGATCGCCAGCGCCAAGGGCGGACCCGCCGC CTTTCAGCTTGCGCCCGGCGATTATTTCGTCAACGTCTCCTTCGGCCGCGCCGGCGTCACCAAGAAGCTCACCGTGCCCG CCGACGGCGCCGTCGACAAGCAAGTGATGGTGCTCGATGCCGGCGGCCTGCTGCTCAATGCCGTCTCCGGCACCGATGCC CGCATCCGCCCCGACCAGCTGAGTTTTTCGATCTATTCCTCGGAAGTGCGCGAGGACGGCGAGCGCGGGCTTGTGGTTGC CGATGTCTCGCCGAACACCGTCGTCCGCCTCAATGCCGGCACCTACCATATCGTTTCCGAATATGGCAGCGTCAACGCCG TTATCCGCGCCGACATCCAGGTCGAAGCCGGCAAGCTGACCGAAGCGACGATCCAGCATCGCGCCGCGCAGGTCACCTTC AAACTGGTCTCCGATGCCGGCGGCGAGGCGATCGCCGATACGGCATGGTCGATCCTGACGGCGGCCGGCGACAGCGTCGG CGAAAGCGTCAGCGCCTTCCCGACCATGGTCCTCGCCGAAGGCGGATATTCCGCCGTCGCCCGCAACAAGGACAAGATCT ATCAGCGGGATTTCACCGTCGTCGCCGGCAGGAACACCGATGTCGAGGTTCTGATGAAGGACCAGCAACCGCAGCCGCCG GTGAACGACGCGGCCCGCACGGTGCAGCAAGTGCCTGTGGGAACGCCGCCGCCGCCAGGCGTCCAGCCGGCTCCGGTGGC GCCGCTCCCTTCCTATGAACAACTCGCGCCGCAAGGTGGCGACGACACCAGTCTCGATTGA
Upstream 100 bases:
>100_bases TCATTTTTATGCTGCTGCAAAGGCTGGGTCTTGAATTTGCCATCGCGTTGGTCTTGAAGTGGCCTTTGCGATTTCAGAAG TCAATTGGTTCACGAAACAG
Downstream 100 bases:
>100_bases TTTACCGCAAAAGGTTTCGCCTTAGCCGAGACCTTTGGGGCGCGCGCTTTGCCGGCGCCATCGAGAAGACGGCCTCATAG AGGCGGGCCAGCAGACCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MFGISPFARIGLAIALTILTPPGASAQDAFKEFKQLESTSKMPKLDAFIAPGTAPEGVKLRDVPMEAKLTADGTPVEEGL SWYVFSPIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGAVDKQVMVLDAGGLLLNAVSGTDA RIRPDQLSFSIYSSEVREDGERGLVVADVSPNTVVRLNAGTYHIVSEYGSVNAVIRADIQVEAGKLTEATIQHRAAQVTF KLVSDAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQPQPP VNDAARTVQQVPVGTPPPPGVQPAPVAPLPSYEQLAPQGGDDTSLD
Sequences:
>Translated_366_residues MFGISPFARIGLAIALTILTPPGASAQDAFKEFKQLESTSKMPKLDAFIAPGTAPEGVKLRDVPMEAKLTADGTPVEEGL SWYVFSPIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGAVDKQVMVLDAGGLLLNAVSGTDA RIRPDQLSFSIYSSEVREDGERGLVVADVSPNTVVRLNAGTYHIVSEYGSVNAVIRADIQVEAGKLTEATIQHRAAQVTF KLVSDAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQPQPP VNDAARTVQQVPVGTPPPPGVQPAPVAPLPSYEQLAPQGGDDTSLD >Mature_366_residues MFGISPFARIGLAIALTILTPPGASAQDAFKEFKQLESTSKMPKLDAFIAPGTAPEGVKLRDVPMEAKLTADGTPVEEGL SWYVFSPIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVSFGRAGVTKKLTVPADGAVDKQVMVLDAGGLLLNAVSGTDA RIRPDQLSFSIYSSEVREDGERGLVVADVSPNTVVRLNAGTYHIVSEYGSVNAVIRADIQVEAGKLTEATIQHRAAQVTF KLVSDAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTVVAGRNTDVEVLMKDQQPQPP VNDAARTVQQVPVGTPPPPGVQPAPVAPLPSYEQLAPQGGDDTSLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38217; Mature: 38217
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGISPFARIGLAIALTILTPPGASAQDAFKEFKQLESTSKMPKLDAFIAPGTAPEGVKL CCCCCHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEE RDVPMEAKLTADGTPVEEGLSWYVFSPIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVS ECCCCEEEEECCCCCHHHCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEE FGRAGVTKKLTVPADGAVDKQVMVLDAGGLLLNAVSGTDARIRPDQLSFSIYSSEVREDG ECCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCEECCCCEEEEEEHHHHHCCC ERGLVVADVSPNTVVRLNAGTYHIVSEYGSVNAVIRADIQVEAGKLTEATIQHRAAQVTF CCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHEEEE KLVSDAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTV EEECCCCCCHHHHHHHHHHHHCCCHHCCHHHHCCEEEEECCCCHHHHCCCHHHEECCEEE VAGRNTDVEVLMKDQQPQPPVNDAARTVQQVPVGTPPPPGVQPAPVAPLPSYEQLAPQGG EECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC DDTSLD CCCCCC >Mature Secondary Structure MFGISPFARIGLAIALTILTPPGASAQDAFKEFKQLESTSKMPKLDAFIAPGTAPEGVKL CCCCCHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEE RDVPMEAKLTADGTPVEEGLSWYVFSPIAGTDGKLPLIASAKGGPAAFQLAPGDYFVNVS ECCCCEEEEECCCCCHHHCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEE FGRAGVTKKLTVPADGAVDKQVMVLDAGGLLLNAVSGTDARIRPDQLSFSIYSSEVREDG ECCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCEECCCCEEEEEEHHHHHCCC ERGLVVADVSPNTVVRLNAGTYHIVSEYGSVNAVIRADIQVEAGKLTEATIQHRAAQVTF CCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHEEEE KLVSDAGGEAIADTAWSILTAAGDSVGESVSAFPTMVLAEGGYSAVARNKDKIYQRDFTV EEECCCCCCHHHHHHHHHHHHCCCHHCCHHHHCCEEEEECCCCHHHHCCCHHHEECCEEE VAGRNTDVEVLMKDQQPQPPVNDAARTVQQVPVGTPPPPGVQPAPVAPLPSYEQLAPQGG EECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC DDTSLD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA