| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is hflX [H]
Identifier: 209549232
GI number: 209549232
Start: 1662949
End: 1664274
Strand: Direct
Name: hflX [H]
Synonym: Rleg2_1633
Alternate gene names: 209549232
Gene position: 1662949-1664274 (Clockwise)
Preceding gene: 209549231
Following gene: 209549235
Centisome position: 36.65
GC content: 64.93
Gene sequence:
>1326_bases ATGCGCGCGACCGTCGTCGTGCCGGTCCTGAAATCGCGCAGCCGCGGCGGCCAGAGCGAATCGGCCTCGACCCGCACACC GGAAAGCCGGCTCGAAGAAGCGACAGGGCTTGCCCAGGCGATCGACCTCGATGTCGTCACTGGCTCGATCGTGCCGGTCA ATGATCCGCGACCGGCGACATTGCTCGGCACCGGCAAGATCGAGGAGATCAAGGCGCTGCTCAACGAGCGCGATTCCGGT CTCGTCATCGTCGATCATCCGCTGACGCCGGTGCAGCAGCGCAATCTCGAAAAGGAATGGAACGCCAAGGTCATCGACCG CACGGGCCTCATCCTCGAAATCTTCGGCCGTCGCGCCTCCACCAAGGAAGGCACGCTGCAGGTCGATCTCGCCCACCTGA ATTATCAGAAGGGCAGGCTGGTTCGAAGCTGGACCCACCTTGAACGCCAGCGCGGCGGCGGCGGCTTCATGGGCGGCCCC GGCGAAACCCAGATCGAAGCCGACCGGCGGATGCTGCAGGATCGCATCATCAAGCTCGAACGCGAGTTGGAGCAGGTCGT GCGCACCCGCCAGCTCCATCGCGCCAAGCGCCGTAAGGTGCCGCACCCGATCGTGGCGCTGGTCGGCTATACCAATGCCG GCAAATCGACGCTGTTCAACCGCATCACCGGCGCCGGCGTGCTGGCCGAAGACATGCTCTTTGCCACGCTCGACCCGACG CTGCGCCGCATGAAGCTGCCACACGGCCGCACCGTCATCCTGTCCGACACCGTGGGCTTCATCTCCGATCTGCCGACCCA TCTGGTCGCCGCCTTCCGCGCGACGCTGGAAGAGGTGCTGGAAGCCGATCTCATCCTGCATGTCCGTGATATGTCCGATC CCGACAACCAGGCGCAAAGCTCCGACGTGATGCGCATCCTCGGCGATCTCGGCATCGACGAGGCCGAAGCGGCGAAGCGG CTGATCGAGGTCTGGAACAAGATCGACCGGCTGGAGCCCGAGGTGCACGACACCATGGTGCAGAAGTCGGCGGGTGCGAC CAACGTCGTCGCCGTCTCGGCCGTCAGCGGCGAGGGCGTCGACACGCTGATGGACGAGATCAGCCGCCGGCTTTCCGGCG TCATGACCGAAACGACCGTCCGCCTTCCCGTCGACAAGCTGGCGCTGCTGCCCTGGCTCTACGACCACGCAATCGTCGAC GGCCGCGAGGACAATGAAGACGGCTCGATCACGCTGGAGCTGCGCCTCTCCGAAACCGAAGCCACCGAACTCGAACGCCG CATCGGCAACGGCCCGAAATCTTCGAAGGAAGATTGGGAGCGGTAA
Upstream 100 bases:
>100_bases AGAGCGAAGAAGCAGCGTCCTAACAGGATCAGCCGTCATTTCGACACGCGATACCAAGAACGATTCGATCATCCCTGAGG CCGCCAAGCACAGGGACGAC
Downstream 100 bases:
>100_bases AGCACTCGGCACGCCCTTCATTCTGCCCTTCGCTTGCGCTCAGGATGAGCTATCTCTGGCGACTCTAACCCACCCTCCGT CGTCCTCGGCCTTGAGCCGA
Product: GTP-binding proten HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MRATVVVPVLKSRSRGGQSESASTRTPESRLEEATGLAQAIDLDVVTGSIVPVNDPRPATLLGTGKIEEIKALLNERDSG LVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGGGFMGGP GETQIEADRRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPT LRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKR LIEVWNKIDRLEPEVHDTMVQKSAGATNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTVRLPVDKLALLPWLYDHAIVD GREDNEDGSITLELRLSETEATELERRIGNGPKSSKEDWER
Sequences:
>Translated_441_residues MRATVVVPVLKSRSRGGQSESASTRTPESRLEEATGLAQAIDLDVVTGSIVPVNDPRPATLLGTGKIEEIKALLNERDSG LVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGGGFMGGP GETQIEADRRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPT LRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKR LIEVWNKIDRLEPEVHDTMVQKSAGATNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTVRLPVDKLALLPWLYDHAIVD GREDNEDGSITLELRLSETEATELERRIGNGPKSSKEDWER >Mature_441_residues MRATVVVPVLKSRSRGGQSESASTRTPESRLEEATGLAQAIDLDVVTGSIVPVNDPRPATLLGTGKIEEIKALLNERDSG LVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRASTKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGGGFMGGP GETQIEADRRMLQDRIIKLERELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPT LRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNQAQSSDVMRILGDLGIDEAEAAKR LIEVWNKIDRLEPEVHDTMVQKSAGATNVVAVSAVSGEGVDTLMDEISRRLSGVMTETTVRLPVDKLALLPWLYDHAIVD GREDNEDGSITLELRLSETEATELERRIGNGPKSSKEDWER
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=266, Percent_Identity=37.593984962406, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI310133116, Length=266, Percent_Identity=37.593984962406, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI310124269, Length=247, Percent_Identity=38.0566801619433, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310124267, Length=247, Percent_Identity=38.0566801619433, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310124171, Length=247, Percent_Identity=38.0566801619433, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310124169, Length=247, Percent_Identity=38.0566801619433, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1790615, Length=374, Percent_Identity=46.524064171123, Blast_Score=292, Evalue=3e-80, Organism=Caenorhabditis elegans, GI17561038, Length=437, Percent_Identity=29.7482837528604, Blast_Score=194, Evalue=6e-50, Organism=Drosophila melanogaster, GI24650079, Length=404, Percent_Identity=35.1485148514851, Blast_Score=161, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 48867; Mature: 48867
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATVVVPVLKSRSRGGQSESASTRTPESRLEEATGLAQAIDLDVVTGSIVPVNDPRPAT CCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCE LLGTGKIEEIKALLNERDSGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRAS EEECCCHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHCCCEEECCCCHHHHHHCCCCC TKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGGGFMGGPGETQIEADRRMLQDRIIKLE CCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPT HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCHH LRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNQAQS HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH SDVMRILGDLGIDEAEAAKRLIEVWNKIDRLEPEVHDTMVQKSAGATNVVAVSAVSGEGV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCH DTLMDEISRRLSGVMTETTVRLPVDKLALLPWLYDHAIVDGREDNEDGSITLELRLSETE HHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCH ATELERRIGNGPKSSKEDWER HHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure MRATVVVPVLKSRSRGGQSESASTRTPESRLEEATGLAQAIDLDVVTGSIVPVNDPRPAT CCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCE LLGTGKIEEIKALLNERDSGLVIVDHPLTPVQQRNLEKEWNAKVIDRTGLILEIFGRRAS EEECCCHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHCCCEEECCCCHHHHHHCCCCC TKEGTLQVDLAHLNYQKGRLVRSWTHLERQRGGGGFMGGPGETQIEADRRMLQDRIIKLE CCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RELEQVVRTRQLHRAKRRKVPHPIVALVGYTNAGKSTLFNRITGAGVLAEDMLFATLDPT HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCHH LRRMKLPHGRTVILSDTVGFISDLPTHLVAAFRATLEEVLEADLILHVRDMSDPDNQAQS HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH SDVMRILGDLGIDEAEAAKRLIEVWNKIDRLEPEVHDTMVQKSAGATNVVAVSAVSGEGV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCH DTLMDEISRRLSGVMTETTVRLPVDKLALLPWLYDHAIVDGREDNEDGSITLELRLSETE HHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCH ATELERRIGNGPKSSKEDWER HHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]