| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is dat [H]
Identifier: 209549230
GI number: 209549230
Start: 1661659
End: 1662522
Strand: Direct
Name: dat [H]
Synonym: Rleg2_1631
Alternate gene names: 209549230
Gene position: 1661659-1662522 (Clockwise)
Preceding gene: 209549229
Following gene: 209549231
Centisome position: 36.62
GC content: 61.81
Gene sequence:
>864_bases ATGCCGAGAATTGCCTATGTGAATGGCCGCTACGTCAAGCATTCCGACGCCAGCGTGCATATCGAGGATCGCGGTTACCA GTTCGCCGACGGCGTTTATGAGGTCTGCGAGGTGCGTCACGGCTATATCGTCGATCTCACCCGCCATCTGAACCGTCTGG ACCGGTCGCTCGGTGAGCTGCGCATCGCCTGGCCGATGGGCCGGGCCGCACTGACGCAGGTCATTCGCGAGACACTGCGC CGCAACCATGTCCGCAACGGGCTTTTCTATATGCAGGTGACACGCGGCGTCGCCCGGCGCGATCATGTCTTCCCGGCCGA GGGCACGCCGCCGTCGCTTGTCATCACCGCCAAGAGCACCGATCCCAAAATCATTGCCGCCAAGAACGCCAACGGCATCA AGGCGATCACTGTTGCCGACAATCGCTGGGACCGCGTCGACATCAAATCCGTCGGCCTGCTGCCGAATGCCATGGCCCGC CAGCAGGCCAAGGAGGCCGGCGCCCAGGAGGCGATCTATGTCGACGGCGACGGCATGGTGAAGGAAGGGGCGGCGACCAA TGTCTGGATCGTCGATCGCGAGGGAATGCTGGTGACGCGGCCGGCCGAACACGGCATCCTGCGCGGCATTACCCGCACCA CCTTGATGGATGTCGCAGCCAAGCTCGGACTGCAGATCACCGAGCGGAATTTCTCGGTTTCGGAGATGCTCGCGGCCCGC GAGGTCTTTATCACCGCAGCCACAAGTATTTGTTTTCCGGTCGTTTCCGTCGATGGCCAGACGATCGCCAACGGTCATCC GGGCAGCGTTTCGCAGAAAGTCCGCGAGGCCTTTTTCGACGTTGCGGAAAAGATTGCGATTTGA
Upstream 100 bases:
>100_bases GTCAGCGGTTTTCGGGCAACATCATGCTCCACTTTTTGATCTGCCAGGCGCCATTGCAGTGCCGCATTCCGTTATCGCTT TCCGCAAGACCAGGTTTCCT
Downstream 100 bases:
>100_bases TACCAAGATTTGCTGGACGGGTGAAATGAGGCACCGGTCTTGCGGGTGAGGTTGATTGAAATTCTACCGGCCGGATCAGG TCGGCAATAAAGAAAGAAGC
Product: D-amino acid aminotransferase
Products: NA
Alternate protein names: D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPRIAYVNGRYVKHSDASVHIEDRGYQFADGVYEVCEVRHGYIVDLTRHLNRLDRSLGELRIAWPMGRAALTQVIRETLR RNHVRNGLFYMQVTRGVARRDHVFPAEGTPPSLVITAKSTDPKIIAAKNANGIKAITVADNRWDRVDIKSVGLLPNAMAR QQAKEAGAQEAIYVDGDGMVKEGAATNVWIVDREGMLVTRPAEHGILRGITRTTLMDVAAKLGLQITERNFSVSEMLAAR EVFITAATSICFPVVSVDGQTIANGHPGSVSQKVREAFFDVAEKIAI
Sequences:
>Translated_287_residues MPRIAYVNGRYVKHSDASVHIEDRGYQFADGVYEVCEVRHGYIVDLTRHLNRLDRSLGELRIAWPMGRAALTQVIRETLR RNHVRNGLFYMQVTRGVARRDHVFPAEGTPPSLVITAKSTDPKIIAAKNANGIKAITVADNRWDRVDIKSVGLLPNAMAR QQAKEAGAQEAIYVDGDGMVKEGAATNVWIVDREGMLVTRPAEHGILRGITRTTLMDVAAKLGLQITERNFSVSEMLAAR EVFITAATSICFPVVSVDGQTIANGHPGSVSQKVREAFFDVAEKIAI >Mature_286_residues PRIAYVNGRYVKHSDASVHIEDRGYQFADGVYEVCEVRHGYIVDLTRHLNRLDRSLGELRIAWPMGRAALTQVIRETLRR NHVRNGLFYMQVTRGVARRDHVFPAEGTPPSLVITAKSTDPKIIAAKNANGIKAITVADNRWDRVDIKSVGLLPNAMARQ QAKEAGAQEAIYVDGDGMVKEGAATNVWIVDREGMLVTRPAEHGILRGITRTTLMDVAAKLGLQITERNFSVSEMLAARE VFITAATSICFPVVSVDGQTIANGHPGSVSQKVREAFFDVAEKIAI
Specific function: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=288, Percent_Identity=28.4722222222222, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005784 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.21 [H]
Molecular weight: Translated: 31646; Mature: 31515
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIAYVNGRYVKHSDASVHIEDRGYQFADGVYEVCEVRHGYIVDLTRHLNRLDRSLGEL CCCEEEECCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCE RIAWPMGRAALTQVIRETLRRNHVRNGLFYMQVTRGVARRDHVFPAEGTPPSLVITAKST EEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCCCCCCEEEEEECCC DPKIIAAKNANGIKAITVADNRWDRVDIKSVGLLPNAMARQQAKEAGAQEAIYVDGDGMV CCEEEEECCCCCEEEEEEECCCCCEECHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCE KEGAATNVWIVDREGMLVTRPAEHGILRGITRTTLMDVAAKLGLQITERNFSVSEMLAAR ECCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH EVFITAATSICFPVVSVDGQTIANGHPGSVSQKVREAFFDVAEKIAI HHHHHHHHHHHEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRIAYVNGRYVKHSDASVHIEDRGYQFADGVYEVCEVRHGYIVDLTRHLNRLDRSLGEL CCEEEECCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCE RIAWPMGRAALTQVIRETLRRNHVRNGLFYMQVTRGVARRDHVFPAEGTPPSLVITAKST EEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCCCCCCEEEEEECCC DPKIIAAKNANGIKAITVADNRWDRVDIKSVGLLPNAMARQQAKEAGAQEAIYVDGDGMV CCEEEEECCCCCEEEEEEECCCCCEECHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCE KEGAATNVWIVDREGMLVTRPAEHGILRGITRTTLMDVAAKLGLQITERNFSVSEMLAAR ECCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH EVFITAATSICFPVVSVDGQTIANGHPGSVSQKVREAFFDVAEKIAI HHHHHHHHHHHEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9003455 [H]