| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is folD2 [H]
Identifier: 209549226
GI number: 209549226
Start: 1655817
End: 1656713
Strand: Direct
Name: folD2 [H]
Synonym: Rleg2_1627
Alternate gene names: 209549226
Gene position: 1655817-1656713 (Clockwise)
Preceding gene: 209549225
Following gene: 209549227
Centisome position: 36.49
GC content: 60.42
Gene sequence:
>897_bases ATGGGAATGGATAAATTCACACGCGCGGCGAACATCGACGGCAAAGAATATGCCGCAGAGCTCCTCGAGCGCATCAGGGC TGACGTCGAAACGCTGAAGGCAACGACAGGCGCCGTTCCCGGTCTGGCCGTCGTTCTGGTGGGCGACGATCCGGCAAGCG CAATTTACGTGGCTTCAAAGCAGCGTCAGACGGTCGCTGCAGGTATGAAGTCCTTTGAGTATCGGCTCGCGGCGGAAACC TCGCAGGACGAATTGCTCGAGCTCGTGCATCGCCTTAATGAGGATCCGGAAGTATATGGAATTCTTGTACAGTTGCCGCT GCCGGTTCATCTCGATCCAAATGCCGTGATCCAGGCCATCAATCCCGACAAGGATGTCGATGGCTTCCATGTGTCGAATG CCGGCCGCCTTGCCACGGGCAACCCGGCCCTGGTTCCTTGCACTCCTCTAGGCTGCATGATGCTTATCAAGGCGACGCTC GGCGAAAACCTCTCCGGCCTTCATGCCGTCATCGTCGGCAAGTCCAATATCGTTGGAAAGCCAATGGCGCAGATGCTGAT GAACGCACACTGTACCATCACGGTTGTGCATTCGCAGACAAGGAACGCGGCGGAGCTTTGCCGGGCGGCCGACATTCTTG TCGTCGCGGCCGGTAGAGCGGGTCTCGTTCGCGGCGATTGGATCAAGCCTGGCGCCGTCGTGATCGACGTCGGTATCAAC CGGATCCAGGACGGCGAAAAATCCCGGATCGTCGGCGATGTGGCATATGGCGAAGCCGGCCACGCACGCGCCATCACGCC CGTGCCCGGCGGCGTCGGTCCGATGACGATCGCATGCCTGCTGTCCAACACGCTCACGGCATTCCGCCGCCACCACGCCA TGGTCGCCACGGCCTGA
Upstream 100 bases:
>100_bases GTTCCCGGTCTACGGTCACTGAGAATGCGGAAATGCCGTGCCGACATCTTAAAGGCGCGGCACAGCTTGCTGGTCGAGCT TGGATGCAATGGAGCACCCC
Downstream 100 bases:
>100_bases GAAGAAGAACAAGGATAGTAGATATGACCACCACGGCTCCTCGCTACGCTCTTCGTGTGGCATGCCCGTCAATCCGCGGC GTGACGGCCGCCATCGCCAC
Product: methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MGMDKFTRAANIDGKEYAAELLERIRADVETLKATTGAVPGLAVVLVGDDPASAIYVASKQRQTVAAGMKSFEYRLAAET SQDELLELVHRLNEDPEVYGILVQLPLPVHLDPNAVIQAINPDKDVDGFHVSNAGRLATGNPALVPCTPLGCMMLIKATL GENLSGLHAVIVGKSNIVGKPMAQMLMNAHCTITVVHSQTRNAAELCRAADILVVAAGRAGLVRGDWIKPGAVVIDVGIN RIQDGEKSRIVGDVAYGEAGHARAITPVPGGVGPMTIACLLSNTLTAFRRHHAMVATA
Sequences:
>Translated_298_residues MGMDKFTRAANIDGKEYAAELLERIRADVETLKATTGAVPGLAVVLVGDDPASAIYVASKQRQTVAAGMKSFEYRLAAET SQDELLELVHRLNEDPEVYGILVQLPLPVHLDPNAVIQAINPDKDVDGFHVSNAGRLATGNPALVPCTPLGCMMLIKATL GENLSGLHAVIVGKSNIVGKPMAQMLMNAHCTITVVHSQTRNAAELCRAADILVVAAGRAGLVRGDWIKPGAVVIDVGIN RIQDGEKSRIVGDVAYGEAGHARAITPVPGGVGPMTIACLLSNTLTAFRRHHAMVATA >Mature_297_residues GMDKFTRAANIDGKEYAAELLERIRADVETLKATTGAVPGLAVVLVGDDPASAIYVASKQRQTVAAGMKSFEYRLAAETS QDELLELVHRLNEDPEVYGILVQLPLPVHLDPNAVIQAINPDKDVDGFHVSNAGRLATGNPALVPCTPLGCMMLIKATLG ENLSGLHAVIVGKSNIVGKPMAQMLMNAHCTITVVHSQTRNAAELCRAADILVVAAGRAGLVRGDWIKPGAVVIDVGINR IQDGEKSRIVGDVAYGEAGHARAITPVPGGVGPMTIACLLSNTLTAFRRHHAMVATA
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=288, Percent_Identity=44.7916666666667, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=42.320819112628, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI94721354, Length=292, Percent_Identity=42.4657534246575, Blast_Score=192, Evalue=2e-49, Organism=Homo sapiens, GI36796743, Length=199, Percent_Identity=25.6281407035176, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1786741, Length=282, Percent_Identity=50, Blast_Score=256, Evalue=9e-70, Organism=Caenorhabditis elegans, GI17568735, Length=287, Percent_Identity=40.7665505226481, Blast_Score=198, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=42.8571428571429, Blast_Score=229, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6321643, Length=296, Percent_Identity=40.8783783783784, Blast_Score=216, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6322933, Length=187, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI62472483, Length=305, Percent_Identity=43.9344262295082, Blast_Score=232, Evalue=2e-61, Organism=Drosophila melanogaster, GI45551871, Length=305, Percent_Identity=43.9344262295082, Blast_Score=232, Evalue=2e-61, Organism=Drosophila melanogaster, GI24645718, Length=298, Percent_Identity=44.2953020134228, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI17137370, Length=298, Percent_Identity=44.2953020134228, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI17136816, Length=305, Percent_Identity=45.2459016393443, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI17136818, Length=296, Percent_Identity=45.6081081081081, Blast_Score=226, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 31403; Mature: 31272
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMDKFTRAANIDGKEYAAELLERIRADVETLKATTGAVPGLAVVLVGDDPASAIYVASK CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC QRQTVAAGMKSFEYRLAAETSQDELLELVHRLNEDPEVYGILVQLPLPVHLDPNAVIQAI CHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEECHHHEEEEC NPDKDVDGFHVSNAGRLATGNPALVPCTPLGCMMLIKATLGENLSGLHAVIVGKSNIVGK CCCCCCCCEEECCCCCEECCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC PMAQMLMNAHCTITVVHSQTRNAAELCRAADILVVAAGRAGLVRGDWIKPGAVVIDVGIN HHHHHHHCCCEEEEEEECCCCCHHHHHHHCCEEEEECCCCCCEECCCCCCCCEEEECCCC RIQDGEKSRIVGDVAYGEAGHARAITPVPGGVGPMTIACLLSNTLTAFRRHHAMVATA CCCCCCCCEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECC >Mature Secondary Structure GMDKFTRAANIDGKEYAAELLERIRADVETLKATTGAVPGLAVVLVGDDPASAIYVASK CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECC QRQTVAAGMKSFEYRLAAETSQDELLELVHRLNEDPEVYGILVQLPLPVHLDPNAVIQAI CHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEECHHHEEEEC NPDKDVDGFHVSNAGRLATGNPALVPCTPLGCMMLIKATLGENLSGLHAVIVGKSNIVGK CCCCCCCCEEECCCCCEECCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC PMAQMLMNAHCTITVVHSQTRNAAELCRAADILVVAAGRAGLVRGDWIKPGAVVIDVGIN HHHHHHHCCCEEEEEEECCCCCHHHHHHHCCEEEEECCCCCCEECCCCCCCCEEEECCCC RIQDGEKSRIVGDVAYGEAGHARAITPVPGGVGPMTIACLLSNTLTAFRRHHAMVATA CCCCCCCCEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA