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The map label for this gene is secY [H]

Identifier: 209548955

GI number: 209548955

Start: 1372240

End: 1373580

Strand: Direct

Name: secY [H]

Synonym: Rleg2_1352

Alternate gene names: 209548955

Gene position: 1372240-1373580 (Clockwise)

Preceding gene: 209548954

Following gene: 209548956

Centisome position: 30.24

GC content: 60.1

Gene sequence:

>1341_bases
ATGGCTTCTGCAGCGGAACAATTGGCATCCAACCTCAATTTTTCGACCTTTGCCAAAGCCGAGGATTTGAAGAAGCGCCT
GTGGTTCACACTGGCAGCTCTCCTCGTTTACAGGCTCGGTACCCATATTCCGCTTCCAGGCCTCAATCCCGAAGCCTATG
CCCAGGCTTTCCGCGGCCAGGCAGGCGGCATTCTCGGCCTTTTCAACATGTTTTCTGGCGGCGCCGTTCAGCGCATGGCG
ATCTTCGCGCTCGGCATCATGCCCTATATCTCTGCTTCGATCATCGTGCAGCTGATGACATCGGTCGTGCCGGCGCTCGA
AAACCTCAAGAAAGAGGGCGAGCAGGGCCGTAAGATCATCAACCAGTATACCCGCTATGGCACGGTCATCCTCGGTGCGC
TCCAGGCCTACGGCATTGCCGCCGGTCTCGAGAGCGGCCAGGGCCTCGTCGTCGATCCGGGCTTGTTCTTCCGTGTTTCC
ACCGTTCTGACGCTGCTCGGCGGCACGATGTTCCTGATGTGGCTCGGCGAGCAGATCACCTCGCGCGGCATCGGCAACGG
CATTTCGCTGATCATCTTCGCCGGCATCGCCGCCGGTCTTCCGACCGCTCTTGCCGGCACGCTCGAGCTCGGCCGCACCG
GTGCGCTGTCGACCTTCCTCATTCTGCTGGTCATCATCGTCGCGATCGGCGTCATCGGGGTCATCGTCTTCGTCGAGCGG
GCGCAGCGCCGGCTTTTGATCCAGTATCCGAAGCGCCAGGTCGGCAACCGGATGTTCCAGGGCGATACCTCGCATCTGCC
GCTGAAGCTCAACACCTCGGGCGTCATCCCGGCGATCTTCGCCTCGTCGCTGCTGCTGCTGCCGGCAACGCTTGCAGGCT
TTGCCAACACCACGGCAATGCCCTCCTGGGCAACGTCGATCGTCGCGGCCCTCGGCCATGGCCAGCCGCTCTACATGGTG
CTCTATGCGGCGCTGATCGCCTTCTTCGCCTTCTTCTATACCGCCATCGTCTTCAATCCGAAGGACACGGCCGACAATCT
GAAGAAGCATGGCGGCTTCATTCCCGGCATCCGCCCGGGCGAGCGCACCGCCGAATATATCGACTACGTGCTGACCCGGA
TCACGGTGATCGGCGCAATCTATCTCGTCTTCGTCTGCATCCTTCCGGAGATCTTGGTGTCGCAAACCGGCATCCCATTA
TCCCTTGGTGGGACTTCGCTTTTGATCGTGGTTAGCGTAACTCTTGATACGGTTGCACAGATCCAGGGTCACCTGATCGC
GCAGCAATACGAAGGCCTGATCAAGAAATCGAAGTTGCGTGGAGGAAAGAGGGGGCGATGA

Upstream 100 bases:

>100_bases
GCTGCAATCCGTACTGAACCCGGTTTTGAATAATTTTCATACTGATTCCGGGGCCGGCCTATCCCCCAGAGACGCCGGAA
TTGGTAGCGCGGAGAAACGC

Downstream 100 bases:

>100_bases
GACTTATCCTTTTAGGGCCGCCGGGCGCGGGTAAGGGAACCCAGGCCCAGCGGATCGTGGAAAAGCACGGCATTCCGCAG
CTTTCCACGGGGGACATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQAGGILGLFNMFSGGAVQRMA
IFALGIMPYISASIIVQLMTSVVPALENLKKEGEQGRKIINQYTRYGTVILGALQAYGIAAGLESGQGLVVDPGLFFRVS
TVLTLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPTALAGTLELGRTGALSTFLILLVIIVAIGVIGVIVFVER
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANTTAMPSWATSIVAALGHGQPLYMV
LYAALIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVIGAIYLVFVCILPEILVSQTGIPL
SLGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKKSKLRGGKRGR

Sequences:

>Translated_446_residues
MASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQAGGILGLFNMFSGGAVQRMA
IFALGIMPYISASIIVQLMTSVVPALENLKKEGEQGRKIINQYTRYGTVILGALQAYGIAAGLESGQGLVVDPGLFFRVS
TVLTLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPTALAGTLELGRTGALSTFLILLVIIVAIGVIGVIVFVER
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANTTAMPSWATSIVAALGHGQPLYMV
LYAALIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVIGAIYLVFVCILPEILVSQTGIPL
SLGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKKSKLRGGKRGR
>Mature_445_residues
ASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQAGGILGLFNMFSGGAVQRMAI
FALGIMPYISASIIVQLMTSVVPALENLKKEGEQGRKIINQYTRYGTVILGALQAYGIAAGLESGQGLVVDPGLFFRVST
VLTLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAGLPTALAGTLELGRTGALSTFLILLVIIVAIGVIGVIVFVERA
QRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANTTAMPSWATSIVAALGHGQPLYMVL
YAALIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVIGAIYLVFVCILPEILVSQTGIPLS
LGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKKSKLRGGKRGR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=426, Percent_Identity=55.1643192488263, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47629; Mature: 47498

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASAAEQLASNLNFSTFAKAEDLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQ
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
AGGILGLFNMFSGGAVQRMAIFALGIMPYISASIIVQLMTSVVPALENLKKEGEQGRKII
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYGTVILGALQAYGIAAGLESGQGLVVDPGLFFRVSTVLTLLGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGIGNGISLIIFAGIAAGLPTALAGTLELGRTGALSTFLILLVIIVAIGVIGVIVFVER
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPAIFASSLLLLPATLAGFANTTAM
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PSWATSIVAALGHGQPLYMVLYAALIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPG
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC
ERTAEYIDYVLTRITVIGAIYLVFVCILPEILVSQTGIPLSLGGTSLLIVVSVTLDTVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHEEHHHHHHHHH
IQGHLIAQQYEGLIKKSKLRGGKRGR
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA