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The map label for this gene is nudK [H]

Identifier: 209548695

GI number: 209548695

Start: 1112024

End: 1112614

Strand: Direct

Name: nudK [H]

Synonym: Rleg2_1092

Alternate gene names: 209548695

Gene position: 1112024-1112614 (Clockwise)

Preceding gene: 209548694

Following gene: 209548696

Centisome position: 24.5

GC content: 59.56

Gene sequence:

>591_bases
ATGATGCAACCGAAATCACGGGTGAAGATCGTCGGCGAGGAAACGCTGTCGAATGGCTGGACGCGGTTGAGCAGCTACCT
GCTCGATTATATCGACAGCAAGGGGGCAACCCAGCGCTTGAAGCGGGAGGTATACCACCGCACGCCCGCCGCCTGCATCC
TGCTTTATGATCCGAAACGCGATCTCGTCATCCTCGTCCGCCAGTTCCGCCTTGCCGTCCATATCAACGGCGATCCCGCC
TGGATGATCGAGGTGCCGGCCGGCCTTCTCGATGACGATCATCCCGAACAGGCGATCCGCCGCGAGGCGATGGAGGAAAC
CGGTTATCACCTCCGCGATGCGCGTTTCCTGTTCAAATGCTATACCTCACCCGGCGCCATCACCGAAGTCGTCCACTTCT
TCGTCTCGCTGATCGACATCGCCGACCGCGTGGCGGAAGGCGGCGGCCTGGACGAGGAGCACGAGGATATCGAGGTTCTC
GAAGTCCCGCTCGACGAGGCTGCCCAAATGATCGAAAACGGCGAGATCTTCGACGCCAAGACGATCATGCTGCTGCAATG
GGCCTTGTTGAACCGGAGTAAACTTCGATAG

Upstream 100 bases:

>100_bases
ACGGCGAGGGTATCAACGTCCTCACAGGCGCCGACCCGGTCGCGCCCTATGGCGGGGCGGCCGTGCACGACAACAAGGTC
TGGCTTCGCAAGGACGCAGC

Downstream 100 bases:

>100_bases
CGGATGAGCTGTCTCGGGCAAGCCGTCGGGTTGGCCTCAAGACGGTTTCGCTATCGCGGTCATGGCGTTCGAAAAGTTCA
TACGTTTGTCACGAAGCGGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MMQPKSRVKIVGEETLSNGWTRLSSYLLDYIDSKGATQRLKREVYHRTPAACILLYDPKRDLVILVRQFRLAVHINGDPA
WMIEVPAGLLDDDHPEQAIRREAMEETGYHLRDARFLFKCYTSPGAITEVVHFFVSLIDIADRVAEGGGLDEEHEDIEVL
EVPLDEAAQMIENGEIFDAKTIMLLQWALLNRSKLR

Sequences:

>Translated_196_residues
MMQPKSRVKIVGEETLSNGWTRLSSYLLDYIDSKGATQRLKREVYHRTPAACILLYDPKRDLVILVRQFRLAVHINGDPA
WMIEVPAGLLDDDHPEQAIRREAMEETGYHLRDARFLFKCYTSPGAITEVVHFFVSLIDIADRVAEGGGLDEEHEDIEVL
EVPLDEAAQMIENGEIFDAKTIMLLQWALLNRSKLR
>Mature_196_residues
MMQPKSRVKIVGEETLSNGWTRLSSYLLDYIDSKGATQRLKREVYHRTPAACILLYDPKRDLVILVRQFRLAVHINGDPA
WMIEVPAGLLDDDHPEQAIRREAMEETGYHLRDARFLFKCYTSPGAITEVVHFFVSLIDIADRVAEGGGLDEEHEDIEVL
EVPLDEAAQMIENGEIFDAKTIMLLQWALLNRSKLR

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=182, Percent_Identity=45.0549450549451, Blast_Score=162, Evalue=9e-42,
Organism=Escherichia coli, GI1789412, Length=194, Percent_Identity=32.4742268041237, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22422; Mature: 22422

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQPKSRVKIVGEETLSNGWTRLSSYLLDYIDSKGATQRLKREVYHRTPAACILLYDPKR
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCC
DLVILVRQFRLAVHINGDPAWMIEVPAGLLDDDHPEQAIRREAMEETGYHLRDARFLFKC
HHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHE
YTSPGAITEVVHFFVSLIDIADRVAEGGGLDEEHEDIEVLEVPLDEAAQMIENGEIFDAK
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCHH
TIMLLQWALLNRSKLR
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQPKSRVKIVGEETLSNGWTRLSSYLLDYIDSKGATQRLKREVYHRTPAACILLYDPKR
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCC
DLVILVRQFRLAVHINGDPAWMIEVPAGLLDDDHPEQAIRREAMEETGYHLRDARFLFKC
HHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHE
YTSPGAITEVVHFFVSLIDIADRVAEGGGLDEEHEDIEVLEVPLDEAAQMIENGEIFDAK
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCHH
TIMLLQWALLNRSKLR
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA