| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yoaE [H]
Identifier: 209548694
GI number: 209548694
Start: 1109889
End: 1112027
Strand: Direct
Name: yoaE [H]
Synonym: Rleg2_1091
Alternate gene names: 209548694
Gene position: 1109889-1112027 (Clockwise)
Preceding gene: 209548691
Following gene: 209548695
Centisome position: 24.46
GC content: 64.33
Gene sequence:
>2139_bases ATGAACATTGCGACCCCCATCCACGCCAAATCCCCGAAGCCGGACATCAGGGTGGGCCACACGGCCTGTCCGCACGACTG TCCCTCGACCTGCGCGCTGGAGGTCGAGATCGCCGAGGACGGCCGCATCGGCCGCGTGCGCGGCGCAAACGATCATTCCT ACACCTCGGGCGTCATCTGCGCCAAGGTCGCCCGTTATGCCGAACGTCTCTATCATCCCGACCGCCTGATGCACCCCTTG CGCCGCATCGGCGCCAAAGGGGCAGGGCAGTGGCAGCAGATTTCCTGGGACGATGCGCTGGATGAGATCGCCGAAGCCTT CGTGAAGGCCGAGGCAAAGAACGGCAGCGAGGCGATCTGGCCCTATTTCTACGCCGGCACCATGGGCTGGGTGCAGCGTG ATTCGATCGATCGCCTGCGCCATGCCAAGCGCTATTCCGGCTTCTTCTCGTCGATCTGCACCAACCCGGCCTGGACCGGC TTCACCATGGCGACCGGCACGCTGCGCGGCCCCGATCCGCGCGAGATGGGCCGCACCGATTGCGTCGTCATCTGGGGCAC CAATGCGGTCTCGACCCAGGTCAATGTGATGACCCACGCCATCAAGTCGCGCAAGGAGCGCGGCGCCAGGATCGTCGTCA TCGATATCTACGACAACCCGACGATGAAGCAGGCCGACATGGCCTTGATCGTCAGGCCGGGCACGGACGCCGCACTCGCC TGCGCCGTCATGCACATCGCCTTCCGCGACGGCCATGCCGACCGTGACTATATGGCGCGATATGCCGACGATCCCGAAGG TCTCGAAGCGCATCTGAGAACGAAGACGCCGCAATGGGCCGCCGATATCACCGGCCTTTCGGTCGAGGAGATCGAAGCCT TCGCAAGCCTCGTCGGCACGACGAAAAAGACCTTTTTCCGCCTCGGCTACGGCTTCACCCGCCAGCGCAACGGGGCTGTT GCCATGCATGCGGCCGCTTCGATCGCCACCGTTCTCGGCTCCTGGCAATATGAGGGCGGTGGCGCCTTCCATTCGAACAG CGATATCTTCCGCATGAACAATGCGGAACTGACCGGCCGGTCGATGAAGGATGCCGATATCCGCATGCTCGACCAGTCGC AGATCGGCCGGGTGCTGACCGGCGATGCGGTGGCGCTGCGCCATCGCGGCCCGGTGACGGCGATGCTGATCCAGAACACC AATCCGGCCAACATCGCCCCCGAGCAGCGCCTCGTCAGGCGCGGCTTTGCCCGCGACGACCTCTTCGTCGCCGTGCACGA GCAGTTCATGACCGAAACGGCCGACATTGCCGATATCGTCATTCCCGCGACGATGTTCGTCGAGCATGACGATATCTACC GGGCCGGCGGCCAGAACCATATTCTGCTCGGGCCGAAGCTGGTCGAGCCGCCGCCAACTGTGCGCACCAATCTCTTCGTC ATCGAGGAACTGGCCAAACGCCTCGGCGTCGCCGATCGACCCGGCTTCGGCTTTTCTGCTCGCGAGATGGTCGACCGCGT GCTCGAATCGAGCGGCCTGCCGGATTACGACCATTTCCTCGAACACAAATGGTACGATCGCCAGCCGGCTTTCGAGGAGG CGCATTTCCTGAACGGCTTTGCCCATCCTGACGGCAAGTTCCATTTCCGACCGGACTGGATCAATCAGCCGGCGCCGAAC AAGCCGCCGGCGGCGGTCGGCGCGCTCGGGCCGCATGCCGAGCTTCCCGCCTTCCCCGATCAGGTCGACGTCATCGAAGT CGCCGATCCCGAGCATCCCTTCCGCCTCGCCACCTCGCCCGCCCGCAACTTCCTGAATTCGAGTTTCTCCGAGACCAAGA CGTCGCGTCAGAAGGAGGGCCGCCCCGAGGTGATGATCAATCCGGCCGACGCCGAAGCGATGGGCATCGCCCATGGCGAT CTCGTCCGCATCGGCAACGGTCGCGGCGATCTGCGCATCCATGCCCGCATCACCACCGAGGTGAAGCCTGGCGTGTTGAT CGCCGAAGGCCTTTGGCCGAATAAGGCGCATATCGACGGCGAGGGTATCAACGTCCTCACAGGCGCCGACCCGGTCGCGC CCTATGGCGGGGCGGCCGTGCACGACAACAAGGTCTGGCTTCGCAAGGACGCAGCATGA
Upstream 100 bases:
>100_bases GATGTGGCGGTAGTTCATTTTCGCTGATGCCCGTATGAATTCGCGTCATGGGAAAGTTTTGTGGCTTTTGGCCGTGCAAG CCTTGGAATATACAAATGCC
Downstream 100 bases:
>100_bases TGCAACCGAAATCACGGGTGAAGATCGTCGGCGAGGAAACGCTGTCGAATGGCTGGACGCGGTTGAGCAGCTACCTGCTC GATTATATCGACAGCAAGGG
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MNIATPIHAKSPKPDIRVGHTACPHDCPSTCALEVEIAEDGRIGRVRGANDHSYTSGVICAKVARYAERLYHPDRLMHPL RRIGAKGAGQWQQISWDDALDEIAEAFVKAEAKNGSEAIWPYFYAGTMGWVQRDSIDRLRHAKRYSGFFSSICTNPAWTG FTMATGTLRGPDPREMGRTDCVVIWGTNAVSTQVNVMTHAIKSRKERGARIVVIDIYDNPTMKQADMALIVRPGTDAALA CAVMHIAFRDGHADRDYMARYADDPEGLEAHLRTKTPQWAADITGLSVEEIEAFASLVGTTKKTFFRLGYGFTRQRNGAV AMHAAASIATVLGSWQYEGGGAFHSNSDIFRMNNAELTGRSMKDADIRMLDQSQIGRVLTGDAVALRHRGPVTAMLIQNT NPANIAPEQRLVRRGFARDDLFVAVHEQFMTETADIADIVIPATMFVEHDDIYRAGGQNHILLGPKLVEPPPTVRTNLFV IEELAKRLGVADRPGFGFSAREMVDRVLESSGLPDYDHFLEHKWYDRQPAFEEAHFLNGFAHPDGKFHFRPDWINQPAPN KPPAAVGALGPHAELPAFPDQVDVIEVADPEHPFRLATSPARNFLNSSFSETKTSRQKEGRPEVMINPADAEAMGIAHGD LVRIGNGRGDLRIHARITTEVKPGVLIAEGLWPNKAHIDGEGINVLTGADPVAPYGGAAVHDNKVWLRKDAA
Sequences:
>Translated_712_residues MNIATPIHAKSPKPDIRVGHTACPHDCPSTCALEVEIAEDGRIGRVRGANDHSYTSGVICAKVARYAERLYHPDRLMHPL RRIGAKGAGQWQQISWDDALDEIAEAFVKAEAKNGSEAIWPYFYAGTMGWVQRDSIDRLRHAKRYSGFFSSICTNPAWTG FTMATGTLRGPDPREMGRTDCVVIWGTNAVSTQVNVMTHAIKSRKERGARIVVIDIYDNPTMKQADMALIVRPGTDAALA CAVMHIAFRDGHADRDYMARYADDPEGLEAHLRTKTPQWAADITGLSVEEIEAFASLVGTTKKTFFRLGYGFTRQRNGAV AMHAAASIATVLGSWQYEGGGAFHSNSDIFRMNNAELTGRSMKDADIRMLDQSQIGRVLTGDAVALRHRGPVTAMLIQNT NPANIAPEQRLVRRGFARDDLFVAVHEQFMTETADIADIVIPATMFVEHDDIYRAGGQNHILLGPKLVEPPPTVRTNLFV IEELAKRLGVADRPGFGFSAREMVDRVLESSGLPDYDHFLEHKWYDRQPAFEEAHFLNGFAHPDGKFHFRPDWINQPAPN KPPAAVGALGPHAELPAFPDQVDVIEVADPEHPFRLATSPARNFLNSSFSETKTSRQKEGRPEVMINPADAEAMGIAHGD LVRIGNGRGDLRIHARITTEVKPGVLIAEGLWPNKAHIDGEGINVLTGADPVAPYGGAAVHDNKVWLRKDAA >Mature_712_residues MNIATPIHAKSPKPDIRVGHTACPHDCPSTCALEVEIAEDGRIGRVRGANDHSYTSGVICAKVARYAERLYHPDRLMHPL RRIGAKGAGQWQQISWDDALDEIAEAFVKAEAKNGSEAIWPYFYAGTMGWVQRDSIDRLRHAKRYSGFFSSICTNPAWTG FTMATGTLRGPDPREMGRTDCVVIWGTNAVSTQVNVMTHAIKSRKERGARIVVIDIYDNPTMKQADMALIVRPGTDAALA CAVMHIAFRDGHADRDYMARYADDPEGLEAHLRTKTPQWAADITGLSVEEIEAFASLVGTTKKTFFRLGYGFTRQRNGAV AMHAAASIATVLGSWQYEGGGAFHSNSDIFRMNNAELTGRSMKDADIRMLDQSQIGRVLTGDAVALRHRGPVTAMLIQNT NPANIAPEQRLVRRGFARDDLFVAVHEQFMTETADIADIVIPATMFVEHDDIYRAGGQNHILLGPKLVEPPPTVRTNLFV IEELAKRLGVADRPGFGFSAREMVDRVLESSGLPDYDHFLEHKWYDRQPAFEEAHFLNGFAHPDGKFHFRPDWINQPAPN KPPAAVGALGPHAELPAFPDQVDVIEVADPEHPFRLATSPARNFLNSSFSETKTSRQKEGRPEVMINPADAEAMGIAHGD LVRIGNGRGDLRIHARITTEVKPGVLIAEGLWPNKAHIDGEGINVLTGADPVAPYGGAAVHDNKVWLRKDAA
Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787870, Length=765, Percent_Identity=26.1437908496732, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI87081797, Length=783, Percent_Identity=25.7982120051086, Blast_Score=196, Evalue=3e-51, Organism=Escherichia coli, GI171474008, Length=765, Percent_Identity=25.8823529411765, Blast_Score=192, Evalue=7e-50, Organism=Escherichia coli, GI87081994, Length=764, Percent_Identity=23.5602094240838, Blast_Score=129, Evalue=7e-31, Organism=Escherichia coli, GI3868721, Length=504, Percent_Identity=24.8015873015873, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI145693196, Length=713, Percent_Identity=24.5441795231417, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI1787231, Length=735, Percent_Identity=22.0408163265306, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 78367; Mature: 78367
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIATPIHAKSPKPDIRVGHTACPHDCPSTCALEVEIAEDGRIGRVRGANDHSYTSGVIC CCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHH AKVARYAERLYHPDRLMHPLRRIGAKGAGQWQQISWDDALDEIAEAFVKAEAKNGSEAIW HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC PYFYAGTMGWVQRDSIDRLRHAKRYSGFFSSICTNPAWTGFTMATGTLRGPDPREMGRTD EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCC CVVIWGTNAVSTQVNVMTHAIKSRKERGARIVVIDIYDNPTMKQADMALIVRPGTDAALA EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHHH CAVMHIAFRDGHADRDYMARYADDPEGLEAHLRTKTPQWAADITGLSVEEIEAFASLVGT HHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC TKKTFFRLGYGFTRQRNGAVAMHAAASIATVLGSWQYEGGGAFHSNSDIFRMNNAELTGR HHHHHHHHCCCEEECCCCCEEEHHHHHHHHHHHCCEECCCCEECCCCCEEEECCCEECCC SMKDADIRMLDQSQIGRVLTGDAVALRHRGPVTAMLIQNTNPANIAPEQRLVRRGFARDD CCCCCHHEEECHHHCCCEEECCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCC LFVAVHEQFMTETADIADIVIPATMFVEHDDIYRAGGQNHILLGPKLVEPPPTVRTNLFV EEHEEHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEECCEECCCCCCCCHHHHH IEELAKRLGVADRPGFGFSAREMVDRVLESSGLPDYDHFLEHKWYDRQPAFEEAHFLNGF HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHCCC AHPDGKFHFRPDWINQPAPNKPPAAVGALGPHAELPAFPDQVDVIEVADPEHPFRLATSP CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECHH ARNFLNSSFSETKTSRQKEGRPEVMINPADAEAMGIAHGDLVRIGNGRGDLRIHARITTE HHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCEECCCCCEEEECCCCCCEEEEEEEEEC VKPGVLIAEGLWPNKAHIDGEGINVLTGADPVAPYGGAAVHDNKVWLRKDAA CCCCEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCEEECCEEEEEECCC >Mature Secondary Structure MNIATPIHAKSPKPDIRVGHTACPHDCPSTCALEVEIAEDGRIGRVRGANDHSYTSGVIC CCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHH AKVARYAERLYHPDRLMHPLRRIGAKGAGQWQQISWDDALDEIAEAFVKAEAKNGSEAIW HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC PYFYAGTMGWVQRDSIDRLRHAKRYSGFFSSICTNPAWTGFTMATGTLRGPDPREMGRTD EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCC CVVIWGTNAVSTQVNVMTHAIKSRKERGARIVVIDIYDNPTMKQADMALIVRPGTDAALA EEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHHH CAVMHIAFRDGHADRDYMARYADDPEGLEAHLRTKTPQWAADITGLSVEEIEAFASLVGT HHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC TKKTFFRLGYGFTRQRNGAVAMHAAASIATVLGSWQYEGGGAFHSNSDIFRMNNAELTGR HHHHHHHHCCCEEECCCCCEEEHHHHHHHHHHHCCEECCCCEECCCCCEEEECCCEECCC SMKDADIRMLDQSQIGRVLTGDAVALRHRGPVTAMLIQNTNPANIAPEQRLVRRGFARDD CCCCCHHEEECHHHCCCEEECCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCC LFVAVHEQFMTETADIADIVIPATMFVEHDDIYRAGGQNHILLGPKLVEPPPTVRTNLFV EEHEEHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEECCEECCCCCCCCHHHHH IEELAKRLGVADRPGFGFSAREMVDRVLESSGLPDYDHFLEHKWYDRQPAFEEAHFLNGF HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHCCC AHPDGKFHFRPDWINQPAPNKPPAAVGALGPHAELPAFPDQVDVIEVADPEHPFRLATSP CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECHH ARNFLNSSFSETKTSRQKEGRPEVMINPADAEAMGIAHGDLVRIGNGRGDLRIHARITTE HHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCEECCCCCEEEECCCCCCEEEEEEEEEC VKPGVLIAEGLWPNKAHIDGEGINVLTGADPVAPYGGAAVHDNKVWLRKDAA CCCCEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]