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The map label for this gene is ynfA [C]

Identifier: 209548621

GI number: 209548621

Start: 1037490

End: 1037810

Strand: Direct

Name: ynfA [C]

Synonym: Rleg2_1018

Alternate gene names: 209548621

Gene position: 1037490-1037810 (Clockwise)

Preceding gene: 209548612

Following gene: 209548622

Centisome position: 22.86

GC content: 61.68

Gene sequence:

>321_bases
GTGACCTACATTATTTATGCCTTTGCCGCCGTCTTCGAGATCGGCGGCTGCTTCGCCTTCTGGGCGTGGCTGAAACTTGG
AAAGCCCGTCTGGTGGCTGGCGCCGGGAATGGTCTCGCTGGCACTTTTTGCCTGGCTTCTGACACTGGTGCCGAGCGAGG
CCGCCGGCCGCACTTTCGCGGCCTATGGCGGCATCTATATCGCCGCCTCACTGCTCTGGCTCTGGCTCGTCGAAAACCGC
GTGCCTGATCGCTACGATATTGGCGGGGCGCTGGTCTGCCTTGCGGGAACGAGCATTATCCTCTTTGGGCCGAGAGGCTG
A

Upstream 100 bases:

>100_bases
CGGCTTTGGCGGTGGAGATCATGGGATGGCTCTTGCTGTGATGGCCCATCCTACCCGATGAATAGTGATCAAGAAATGCG
AAGGCGCGAAAGGTGCTTCC

Downstream 100 bases:

>100_bases
CGCGCCTTGACCGGACTCAAGCCGGGTGCAAAGACAAGCCGATGTGTGGACGTTTCGCCCTGACAAGCTCCAGCGCCGAC
CTGCGCGAATTTTTCTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTYIIYAFAAVFEIGGCFAFWAWLKLGKPVWWLAPGMVSLALFAWLLTLVPSEAAGRTFAAYGGIYIAASLLWLWLVENR
VPDRYDIGGALVCLAGTSIILFGPRG

Sequences:

>Translated_106_residues
MTYIIYAFAAVFEIGGCFAFWAWLKLGKPVWWLAPGMVSLALFAWLLTLVPSEAAGRTFAAYGGIYIAASLLWLWLVENR
VPDRYDIGGALVCLAGTSIILFGPRG
>Mature_105_residues
TYIIYAFAAVFEIGGCFAFWAWLKLGKPVWWLAPGMVSLALFAWLLTLVPSEAAGRTFAAYGGIYIAASLLWLWLVENRV
PDRYDIGGALVCLAGTSIILFGPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=102, Percent_Identity=47.0588235294118, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1018_RHILW (B5ZW93)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002280538.1
- GeneID:   6979737
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_1018
- HOGENOM:   HBG313568
- OMA:   WWLAPGL
- ProtClustDB:   CLSK772123
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11606; Mature: 11475

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a369cf8)-; HASH(0x1a5dfabc)-; HASH(0x19ea2e7c)-; HASH(0x1a34c164)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYIIYAFAAVFEIGGCFAFWAWLKLGKPVWWLAPGMVSLALFAWLLTLVPSEAAGRTFA
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AYGGIYIAASLLWLWLVENRVPDRYDIGGALVCLAGTSIILFGPRG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCH
>Mature Secondary Structure 
TYIIYAFAAVFEIGGCFAFWAWLKLGKPVWWLAPGMVSLALFAWLLTLVPSEAAGRTFA
CHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AYGGIYIAASLLWLWLVENRVPDRYDIGGALVCLAGTSIILFGPRG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA