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The map label for this gene is ygfZ [C]

Identifier: 209548616

GI number: 209548616

Start: 1034304

End: 1035158

Strand: Reverse

Name: ygfZ [C]

Synonym: Rleg2_1013

Alternate gene names: 209548616

Gene position: 1035158-1034304 (Counterclockwise)

Preceding gene: 209548617

Following gene: 209548615

Centisome position: 22.81

GC content: 66.2

Gene sequence:

>855_bases
ATGCCAGCCGTATTCCTGAAAGACCGCTCACTTCTCTCTGTCAGCGGCGCGGAAGCCCAATCCTTCCTGCAGAACCTGAT
CACTACCGATATCATCTCGCTTGAGGCCGGCGAGGCGCGGCCCGGGGCACTGCTGACGCCGCAGGGCAAGATCCTGTTCG
ACTTCATGATCTGGCAGGACGGCGACGGCTATACGATCGAATCGGATGCCGGCCAGCGCGACGGCCTGCTGAAGCGGCTG
ACAATGTACAAGCTGCGTGCCGCGGTCACGCTTGCGCCGCGCGCCGAAGACGGTGTCACTGTTTCCTGGGGCGAAGGTGC
CGAGGGCGTCCGGGACAGCCACGGCGTCTGGGACAGTCGCTTCGCCAAGGCCGGCGTCACGTTGATCCGTCAGCCCGGCA
AACATGGCGACGGTGAAGAAGCGCTCTACGATGCGCTGCGCATCGCCCACGGCATCGTCACGTCAGGACAGGACTTCGCG
CTGCAGGATGCCTTCCCGCACGACGTGCTGATGGATTTCAATGGCGGTCTCTCCTTCAGGAAGGGCTGCTATGTCGGCCA
GGAGGTCGTTTCGCGCATGCAGCACCGCGGCACCGCGCGCCGGCGCGTCGTCACAGTGTCCGCCGCAACGGCTCTGCCGG
AGACCGGGACGGAGATATCCGCCGCCGGCAAGCCTGTCGGGACACTCGGTTCGGTCGAAGGCGACCATGGATTGGCGATT
GTGCGCATCGACCGCGCCGGCGCGGCAATCGCCGCCGGCACGCCGCTGCTCGCCGGCGAGACACCCGTTTCCCTCGTCCT
GCCGCAATGGTCCGGCCTTGTCTTTCCCACCAGCGCCGACGAGGCCAGCGCGTGA

Upstream 100 bases:

>100_bases
CCACGCTTGCGCCTTTCGCGTTTCGCCTTTCGGTGGGACGCTTGCGATCCACCTCATGAAGACATACCTCTGAGCGATGA
CCAACGCGACAGGTTCCGCC

Downstream 100 bases:

>100_bases
CAACGGCGAAAGCTCCCCGCGCCTGGCAACGCATGCTGTCCGGGCGCAGGCTCGACCTGCTCGACCCCTCGCCGCTCGAT
GTGGAACTGATCGACATTGC

Product: folate-binding protein YgfZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQDGDGYTIESDAGQRDGLLKRL
TMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDSRFAKAGVTLIRQPGKHGDGEEALYDALRIAHGIVTSGQDFA
LQDAFPHDVLMDFNGGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHGLAI
VRIDRAGAAIAAGTPLLAGETPVSLVLPQWSGLVFPTSADEASA

Sequences:

>Translated_284_residues
MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQDGDGYTIESDAGQRDGLLKRL
TMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDSRFAKAGVTLIRQPGKHGDGEEALYDALRIAHGIVTSGQDFA
LQDAFPHDVLMDFNGGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHGLAI
VRIDRAGAAIAAGTPLLAGETPVSLVLPQWSGLVFPTSADEASA
>Mature_283_residues
PAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQDGDGYTIESDAGQRDGLLKRLT
MYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDSRFAKAGVTLIRQPGKHGDGEEALYDALRIAHGIVTSGQDFAL
QDAFPHDVLMDFNGGLSFRKGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHGLAIV
RIDRAGAAIAAGTPLLAGETPVSLVLPQWSGLVFPTSADEASA

Specific function: Folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA-modifying ygfZ family [H]

Homologues:

Organism=Homo sapiens, GI58197556, Length=272, Percent_Identity=28.3088235294118, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985951, Length=271, Percent_Identity=26.9372693726937, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 29955; Mature: 29824

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQD
CCEEEECCCCEEEECCHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCEEEEEEEEEC
GDGYTIESDAGQRDGLLKRLTMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDSR
CCCEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCCCCCCCHHH
FAKAGVTLIRQPGKHGDGEEALYDALRIAHGIVTSGQDFALQDAFPHDVLMDFNGGLSFR
HHHHCHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCCC
KGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHGLAI
CCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
VRIDRAGAAIAAGTPLLAGETPVSLVLPQWSGLVFPTSADEASA
EEECCCCCEEECCCCEEECCCCEEEEECCCCCEEECCCCCCCCC
>Mature Secondary Structure 
PAVFLKDRSLLSVSGAEAQSFLQNLITTDIISLEAGEARPGALLTPQGKILFDFMIWQD
CEEEECCCCEEEECCHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCEEEEEEEEEC
GDGYTIESDAGQRDGLLKRLTMYKLRAAVTLAPRAEDGVTVSWGEGAEGVRDSHGVWDSR
CCCEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCCCCCCCHHH
FAKAGVTLIRQPGKHGDGEEALYDALRIAHGIVTSGQDFALQDAFPHDVLMDFNGGLSFR
HHHHCHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCCC
KGCYVGQEVVSRMQHRGTARRRVVTVSAATALPETGTEISAAGKPVGTLGSVEGDHGLAI
CCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
VRIDRAGAAIAAGTPLLAGETPVSLVLPQWSGLVFPTSADEASA
EEECCCCCEEECCCCEEECCCCEEEEECCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA